RNA–Protein interactions for RNA: ENST00000470724.5

NXF3-205, Transcript of nuclear RNA export factor 3, humanhuman

TSL 3

Gene NXF3, Length 607 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF3-205ENST00000470724 KAT6BQ8WYB5 2073 aa12.73□□□□□ -0.37
NXF3-205ENST00000470724 LOC102724428A0A0B4J2F2 783 aa12.73□□□□□ -0.37
NXF3-205ENST00000470724 SIK1P57059 783 aa12.73□□□□□ -0.37
NXF3-205ENST00000470724 SLC39A6Q13433 755 aa12.73□□□□□ -0.37
NXF3-205ENST00000470724 DCTN1Q14203 1278 aa12.73□□□□□ -0.37
NXF3-205ENST00000470724 NFE2L2Q16236 605 aa12.73□□□□□ -0.37
NXF3-205ENST00000470724 AK7Q96M32 723 aa12.73□□□□□ -0.37
NXF3-205ENST00000470724 ADAMTS8Q9UP79 889 aa12.73□□□□□ -0.37
NXF3-205ENST00000470724 RRP7AQ9Y3A4 280 aaKnown RBP12.73□□□□□ -0.37
NXF3-205ENST00000470724 BTAF1O14981 1849 aa12.73□□□□□ -0.37
NXF3-205ENST00000470724 ZNF827Q17R98 1081 aa12.72□□□□□ -0.37
NXF3-205ENST00000470724 IL17REQ8NFR9 667 aa12.72□□□□□ -0.37
NXF3-205ENST00000470724 TOGARAM1Q9Y4F4 1720 aa12.71□□□□□ -0.37
NXF3-205ENST00000470724 PHF14O94880 888 aa12.71□□□□□ -0.37
NXF3-205ENST00000470724 HMGB2P26583 209 aaKnown RBP12.71□□□□□ -0.37
NXF3-205ENST00000470724 RIPK4P57078 832 aa12.71□□□□□ -0.37
NXF3-205ENST00000470724 CCDC184Q52MB2 194 aa12.71□□□□□ -0.37
NXF3-205ENST00000470724 RUNDC1Q96C34 613 aa12.71□□□□□ -0.37
NXF3-205ENST00000470724 SENP3-EIF4A1A0A087X0R7 540 aa12.7□□□□□ -0.38
NXF3-205ENST00000470724 BTBD11A6QL63 1104 aa12.7□□□□□ -0.38
NXF3-205ENST00000470724 ZBTB7AO95365 584 aa12.7□□□□□ -0.38
NXF3-205ENST00000470724 PLEKHF1Q96S99 279 aa12.7□□□□□ -0.38
NXF3-205ENST00000470724 LINC00116Q8NCU8 138 aa12.69□□□□□ -0.38
NXF3-205ENST00000470724 RREB1Q92766 1687 aa12.69□□□□□ -0.38
NXF3-205ENST00000470724 NUP188Q5SRE5 1749 aa12.68□□□□□ -0.38
NXF3-205ENST00000470724 GNPATO15228 680 aa12.68□□□□□ -0.38
NXF3-205ENST00000470724 HTATSF1O43719 755 aaKnown RBP12.68□□□□□ -0.38
NXF3-205ENST00000470724 LMOD3Q0VAK6 560 aa12.68□□□□□ -0.38
NXF3-205ENST00000470724 ITPK1Q13572 414 aa12.68□□□□□ -0.38
NXF3-205ENST00000470724 FAM9BQ8IZU0 186 aa12.68□□□□□ -0.38
NXF3-205ENST00000470724 AKT1S1Q96B36 256 aa12.68□□□□□ -0.38
NXF3-205ENST00000470724 THUMPD2Q9BTF0 503 aaKnown RBP12.68□□□□□ -0.38
NXF3-205ENST00000470724 PPP1R1BQ9UD71 204 aaPredicted RBP12.68□□□□□ -0.38
NXF3-205ENST00000470724 ATF5Q9Y2D1 282 aaPredicted RBP12.68□□□□□ -0.38
NXF3-205ENST00000470724 LAS1LQ9Y4W2 734 aaKnown RBP12.68□□□□□ -0.38
NXF3-205ENST00000470724 TMPOP42166 694 aaKnown RBP12.67□□□□□ -0.38
NXF3-205ENST00000470724 PDGFDQ9GZP0 370 aaPredicted RBP12.67□□□□□ -0.38
NXF3-205ENST00000470724 MIS18AQ9NYP9 233 aa12.67□□□□□ -0.38
NXF3-205ENST00000470724 RGPD3A6NKT7 1758 aaPredicted RBP12.66□□□□□ -0.38
NXF3-205ENST00000470724 RGPD4Q7Z3J3 1758 aa12.66□□□□□ -0.38
NXF3-205ENST00000470724 TAF7Q15545 349 aaPredicted RBP12.66□□□□□ -0.38
NXF3-205ENST00000470724 DIEXFQ68CQ4 756 aaKnown RBP12.66□□□□□ -0.38
NXF3-205ENST00000470724 SMIM5Q71RC9 77 aa12.66□□□□□ -0.38
NXF3-205ENST00000470724 DNAJC10Q8IXB1 793 aa12.66□□□□□ -0.38
NXF3-205ENST00000470724 APAF1O14727 1248 aa12.65□□□□□ -0.38
NXF3-205ENST00000470724 ZNF790Q6PG37 636 aa12.65□□□□□ -0.38
NXF3-205ENST00000470724 FMNL2Q96PY5 1086 aa12.65□□□□□ -0.38
NXF3-205ENST00000470724 SLC4A9Q96Q91 983 aa12.65□□□□□ -0.38
NXF3-205ENST00000470724 SPON1Q9HCB6 807 aa12.65□□□□□ -0.38
NXF3-205ENST00000470724 ZNF330Q9Y3S2 320 aaPredicted RBP12.65□□□□□ -0.38
NXF3-205ENST00000470724 PNPLA7Q6ZV29 1317 aa12.64□□□□□ -0.39
NXF3-205ENST00000470724 KCNQ3O43525 872 aa12.64□□□□□ -0.39
NXF3-205ENST00000470724 MSL1Q68DK7 614 aa12.64□□□□□ -0.39
NXF3-205ENST00000470724 NPM2Q86SE8 214 aaKnown RBP12.64□□□□□ -0.39
NXF3-205ENST00000470724 KLHL34Q8N239 644 aa12.64□□□□□ -0.39
NXF3-205ENST00000470724 FLAD1Q8NFF5 587 aa12.64□□□□□ -0.39
NXF3-205ENST00000470724 PNISRQ8TF01 805 aaKnown RBP12.64□□□□□ -0.39
NXF3-205ENST00000470724 ARXQ96QS3 562 aa12.64□□□□□ -0.39
NXF3-205ENST00000470724 TSPYL4Q9UJ04 414 aa12.64□□□□□ -0.39
NXF3-205ENST00000470724 RTCBQ9Y3I0 505 aaKnown RBP12.64□□□□□ -0.39
NXF3-205ENST00000470724 SALL2Q9Y467 1007 aaPredicted RBP12.64□□□□□ -0.39
NXF3-205ENST00000470724 CEMIPQ8WUJ3 1361 aa12.64□□□□□ -0.39
NXF3-205ENST00000470724 ITGB4P16144 1822 aa12.64□□□□□ -0.39
NXF3-205ENST00000470724 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.63□□□□□ -0.39
NXF3-205ENST00000470724 STARD3NLO95772 234 aa12.63□□□□□ -0.39
NXF3-205ENST00000470724 CRKLP46109 303 aaKnown RBP12.63□□□□□ -0.39
NXF3-205ENST00000470724 COL23A1Q86Y22 540 aaPredicted RBP12.63□□□□□ -0.39
NXF3-205ENST00000470724 ZNF496Q96IT1 587 aaPredicted RBP12.63□□□□□ -0.39
NXF3-205ENST00000470724 MTFR1LQ9H019 292 aa12.63□□□□□ -0.39
NXF3-205ENST00000470724 MRC1P22897 1456 aa12.63□□□□□ -0.39
NXF3-205ENST00000470724 CANXP27824 592 aaKnown RBP12.62□□□□□ -0.39
NXF3-205ENST00000470724 POLD1P28340 1107 aa12.62□□□□□ -0.39
NXF3-205ENST00000470724 TRAPPC3LQ5T215 181 aa12.62□□□□□ -0.39
NXF3-205ENST00000470724 SSFA2P28290 1259 aa12.61□□□□□ -0.39
NXF3-205ENST00000470724 RFC4P35249 363 aa12.61□□□□□ -0.39
NXF3-205ENST00000470724 CCDC87Q9NVE4 849 aa12.61□□□□□ -0.39
NXF3-205ENST00000470724 SCN11AQ9UI33 1791 aa12.61□□□□□ -0.39
NXF3-205ENST00000470724 LY75O60449 1722 aa12.6□□□□□ -0.39
NXF3-205ENST00000470724 HEG1Q9ULI3 1381 aa12.6□□□□□ -0.39
NXF3-205ENST00000470724 PAPPAQ13219 1627 aa12.6□□□□□ -0.39
NXF3-205ENST00000470724 RC3H1Q5TC82 1133 aaKnown RBP12.6□□□□□ -0.39
NXF3-205ENST00000470724 VSIG10Q8N0Z9 540 aa12.6□□□□□ -0.39
NXF3-205ENST00000470724 TEX13AQ9BXU3 409 aaPredicted RBP12.6□□□□□ -0.39
NXF3-205ENST00000470724 CNTNAP4Q9C0A0 1308 aa12.6□□□□□ -0.39
NXF3-205ENST00000470724 C5P01031 1676 aa12.59□□□□□ -0.39
NXF3-205ENST00000470724 RPS6KA4O75676 772 aa12.59□□□□□ -0.39
NXF3-205ENST00000470724 SNRPA1P09661 255 aaKnown RBP12.59□□□□□ -0.39
NXF3-205ENST00000470724 CYP19A1P11511 503 aaPredicted RBP12.59□□□□□ -0.39
NXF3-205ENST00000470724 AMIGO3Q86WK7 504 aa12.59□□□□□ -0.39
NXF3-205ENST00000470724 SLC16A10Q8TF71 515 aa12.59□□□□□ -0.39
NXF3-205ENST00000470724 TRIM35Q9UPQ4 493 aa12.59□□□□□ -0.39
NXF3-205ENST00000470724 PRAMEF22A3QJZ6 481 aa12.58□□□□□ -0.4
NXF3-205ENST00000470724 C4BP0C0L5 1744 aa12.58□□□□□ -0.4
NXF3-205ENST00000470724 CALD1Q05682 793 aaKnown RBP12.58□□□□□ -0.4
NXF3-205ENST00000470724 ZBTB1Q9Y2K1 713 aa12.58□□□□□ -0.4
NXF3-205ENST00000470724 KCPQ6ZWJ8 1503 aa12.57□□□□□ -0.4
NXF3-205ENST00000470724 ZPR1O75312 459 aa12.57□□□□□ -0.4
NXF3-205ENST00000470724 A1BGP04217 495 aa12.57□□□□□ -0.4
NXF3-205ENST00000470724 PIP4K2AP48426 406 aaPredicted RBP12.57□□□□□ -0.4
NXF3-205ENST00000470724 INTS5Q6P9B9 1019 aaKnown RBP12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms