RNA–Protein interactions for RNA: ENST00000470710.1

HDLBP-233, Transcript of high density lipoprotein binding protein, human

TSL 2

Gene HDLBP, Length 578 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HDLBP-233	ENST00000470710	ALDH1L2	Q3SY69	923 aa		11.23	□□□□□ -0.61
HDLBP-233	ENST00000470710	C8orf58	Q8NAV2	365 aa		11.23	□□□□□ -0.61
HDLBP-233	ENST00000470710	MIS18A	Q9NYP9	233 aa		11.23	□□□□□ -0.61
HDLBP-233	ENST00000470710	TRPC5	Q9UL62	973 aa	Predicted RBP	11.23	□□□□□ -0.61
HDLBP-233	ENST00000470710	BRPF1	P55201	1214 aa	Predicted RBP	11.22	□□□□□ -0.61
HDLBP-233	ENST00000470710	TWISTNB	Q3B726	338 aa	Predicted RBP	11.22	□□□□□ -0.61
HDLBP-233	ENST00000470710	TSPYL6	Q8N831	410 aa		11.22	□□□□□ -0.61
HDLBP-233	ENST00000470710	GOLGA6L2	Q8N9W4	650 aa	Predicted RBP	11.22	□□□□□ -0.61
HDLBP-233	ENST00000470710	GJD4	Q96KN9	370 aa	Predicted RBP	11.22	□□□□□ -0.61
HDLBP-233	ENST00000470710	WNK3	Q9BYP7	1800 aa		11.21	□□□□□ -0.61
HDLBP-233	ENST00000470710	HOXB7	P09629	217 aa		11.21	□□□□□ -0.61
HDLBP-233	ENST00000470710	CABP4	P57796	275 aa		11.21	□□□□□ -0.61
HDLBP-233	ENST00000470710	EIF4A1	P60842	406 aa	Known RBP	11.21	□□□□□ -0.61
HDLBP-233	ENST00000470710	FAM98C	Q17RN3	349 aa	Known RBP	11.21	□□□□□ -0.61
HDLBP-233	ENST00000470710	SHANK3	Q9BYB0	1731 aa		11.21	□□□□□ -0.62
HDLBP-233	ENST00000470710	ONECUT3	O60422	494 aa	Predicted RBP	11.2	□□□□□ -0.62
HDLBP-233	ENST00000470710	BCAR3	O75815	825 aa		11.2	□□□□□ -0.62
HDLBP-233	ENST00000470710	NFATC2IP	Q8NCF5	419 aa		11.2	□□□□□ -0.62
HDLBP-233	ENST00000470710	SSH1	Q8WYL5	1049 aa		11.2	□□□□□ -0.62
HDLBP-233	ENST00000470710	SCN11A	Q9UI33	1791 aa		11.2	□□□□□ -0.62
HDLBP-233	ENST00000470710	HEG1	Q9ULI3	1381 aa		11.19	□□□□□ -0.62
HDLBP-233	ENST00000470710	KCNQ3	O43525	872 aa		11.19	□□□□□ -0.62
HDLBP-233	ENST00000470710	KRT24	Q2M2I5	525 aa		11.19	□□□□□ -0.62
HDLBP-233	ENST00000470710	ERICH6B	Q5W0A0	696 aa		11.19	□□□□□ -0.62
HDLBP-233	ENST00000470710	ZNF772	Q68DY9	489 aa	Predicted RBP	11.19	□□□□□ -0.62
HDLBP-233	ENST00000470710	ZNF790	Q6PG37	636 aa		11.19	□□□□□ -0.62
HDLBP-233	ENST00000470710	MARCH10	Q8NA82	808 aa	Predicted RBP	11.19	□□□□□ -0.62
HDLBP-233	ENST00000470710	CHMP4A	Q9BY43	222 aa		11.19	□□□□□ -0.62
HDLBP-233	ENST00000470710	QTRT2	Q9H974	415 aa	Known RBP	11.19	□□□□□ -0.62
HDLBP-233	ENST00000470710	SMC4	Q9NTJ3	1288 aa		11.19	□□□□□ -0.62
HDLBP-233	ENST00000470710	GTF3C3	Q9Y5Q9	886 aa		11.19	□□□□□ -0.62
HDLBP-233	ENST00000470710	THSD7A	Q9UPZ6	1657 aa		11.18	□□□□□ -0.62
HDLBP-233	ENST00000470710	KIF16B	Q96L93	1317 aa		11.18	□□□□□ -0.62
HDLBP-233	ENST00000470710	ELL2	O00472	640 aa	Predicted RBP	11.18	□□□□□ -0.62
HDLBP-233	ENST00000470710	GLI3	P10071	1580 aa		11.18	□□□□□ -0.62
HDLBP-233	ENST00000470710	SIPA1L3	O60292	1781 aa	Predicted RBP	11.18	□□□□□ -0.62
HDLBP-233	ENST00000470710	KDM3B	Q7LBC6	1761 aa		11.18	□□□□□ -0.62
HDLBP-233	ENST00000470710	MRPL50	Q8N5N7	158 aa	Known RBP	11.17	□□□□□ -0.62
HDLBP-233	ENST00000470710	BCL2L13	Q9BXK5	485 aa		11.17	□□□□□ -0.62
HDLBP-233	ENST00000470710	TMOD3	Q9NYL9	352 aa		11.17	□□□□□ -0.62
HDLBP-233	ENST00000470710	BCL9	O00512	1426 aa		11.17	□□□□□ -0.62
HDLBP-233	ENST00000470710	PLIN1	O60240	522 aa		11.16	□□□□□ -0.62
HDLBP-233	ENST00000470710	GIGYF1	O75420	1035 aa	Predicted RBP	11.16	□□□□□ -0.62
HDLBP-233	ENST00000470710	SLC39A6	Q13433	755 aa		11.16	□□□□□ -0.62
HDLBP-233	ENST00000470710	FKBP8	Q14318	412 aa		11.16	□□□□□ -0.62
HDLBP-233	ENST00000470710	PDE3A	Q14432	1141 aa		11.16	□□□□□ -0.62
HDLBP-233	ENST00000470710	CCDC30	Q5VVM6	783 aa		11.16	□□□□□ -0.62
HDLBP-233	ENST00000470710	TTC5	Q8N0Z6	440 aa		11.16	□□□□□ -0.62
HDLBP-233	ENST00000470710	IPO8	O15397	1037 aa	Known RBP	11.15	□□□□□ -0.62
HDLBP-233	ENST00000470710	ZKSCAN2	Q63HK3	967 aa		11.15	□□□□□ -0.62
HDLBP-233	ENST00000470710	PIGB	Q92521	554 aa		11.15	□□□□□ -0.62
HDLBP-233	ENST00000470710	ARHGAP45	Q92619	1136 aa		11.15	□□□□□ -0.62
HDLBP-233	ENST00000470710	FMNL2	Q96PY5	1086 aa		11.15	□□□□□ -0.62
HDLBP-233	ENST00000470710		A0A0G2JS52	829 aa		11.14	□□□□□ -0.63
HDLBP-233	ENST00000470710	SNRPA1	P09661	255 aa	Known RBP	11.14	□□□□□ -0.63
HDLBP-233	ENST00000470710	MS4A1	P11836	297 aa		11.14	□□□□□ -0.63
HDLBP-233	ENST00000470710	CANX	P27824	592 aa	Known RBP	11.14	□□□□□ -0.63
HDLBP-233	ENST00000470710	PRIM1	P49642	420 aa	Known RBP	11.14	□□□□□ -0.63
HDLBP-233	ENST00000470710	RBM6	P78332	1123 aa	Known RBP	11.14	□□□□□ -0.63
HDLBP-233	ENST00000470710	MYT1	Q01538	1121 aa		11.14	□□□□□ -0.63
HDLBP-233	ENST00000470710	HDGFL1	Q5TGJ6	251 aa		11.14	□□□□□ -0.63
HDLBP-233	ENST00000470710	SEPT12	Q8IYM1	358 aa		11.14	□□□□□ -0.63
HDLBP-233	ENST00000470710	FRAT1	Q92837	279 aa	Predicted RBP	11.14	□□□□□ -0.63
HDLBP-233	ENST00000470710	ZNF496	Q96IT1	587 aa	Predicted RBP	11.14	□□□□□ -0.63
HDLBP-233	ENST00000470710	STK31	Q9BXU1	1019 aa		11.14	□□□□□ -0.63
HDLBP-233	ENST00000470710	NOB1	Q9ULX3	412 aa	Known RBP	11.14	□□□□□ -0.63
HDLBP-233	ENST00000470710	TOGARAM1	Q9Y4F4	1720 aa		11.14	□□□□□ -0.63
HDLBP-233	ENST00000470710	IRX6	P78412	446 aa	Predicted RBP	11.13	□□□□□ -0.63
HDLBP-233	ENST00000470710	ATF7IP	Q6VMQ6	1270 aa		11.13	□□□□□ -0.63
HDLBP-233	ENST00000470710	VIRMA	Q69YN4	1812 aa	Known RBP	11.13	□□□□□ -0.63
HDLBP-233	ENST00000470710	PTPRC	P08575	1304 aa		11.12	□□□□□ -0.63
HDLBP-233	ENST00000470710	SLC4A2	P04920	1241 aa		11.12	□□□□□ -0.63
HDLBP-233	ENST00000470710	TRIM27	P14373	513 aa		11.12	□□□□□ -0.63
HDLBP-233	ENST00000470710	C20orf194	Q5TEA3	1177 aa		11.12	□□□□□ -0.63
HDLBP-233	ENST00000470710	VSIG10	Q8N0Z9	540 aa		11.12	□□□□□ -0.63
HDLBP-233	ENST00000470710	ATG3	Q9NT62	314 aa		11.12	□□□□□ -0.63
HDLBP-233	ENST00000470710	KCP	Q6ZWJ8	1503 aa		11.12	□□□□□ -0.63
HDLBP-233	ENST00000470710	PAPPA	Q13219	1627 aa		11.12	□□□□□ -0.63
HDLBP-233	ENST00000470710	TCERG1	O14776	1098 aa	Known RBP	11.11	□□□□□ -0.63
HDLBP-233	ENST00000470710	DZIP1L	Q8IYY4	767 aa	Known RBP	11.11	□□□□□ -0.63
HDLBP-233	ENST00000470710	API5	Q9BZZ5	524 aa	Known RBP	11.11	□□□□□ -0.63
HDLBP-233	ENST00000470710	ASAP1	Q9ULH1	1129 aa		11.11	□□□□□ -0.63
HDLBP-233	ENST00000470710	ERBB4	Q15303	1308 aa		11.1	□□□□□ -0.63
HDLBP-233	ENST00000470710	PRAMEF22	A3QJZ6	481 aa		11.1	□□□□□ -0.63
HDLBP-233	ENST00000470710	RLBP1	P12271	317 aa		11.1	□□□□□ -0.63
HDLBP-233	ENST00000470710	EIF2S2	P20042	333 aa	Known RBP	11.1	□□□□□ -0.63
HDLBP-233	ENST00000470710	FTSJ3	Q8IY81	847 aa	Known RBP	11.1	□□□□□ -0.63
HDLBP-233	ENST00000470710	PANK1	Q8TE04	598 aa		11.1	□□□□□ -0.63
HDLBP-233	ENST00000470710	SYTL4	Q96C24	671 aa	Predicted RBP	11.1	□□□□□ -0.63
HDLBP-233	ENST00000470710	CRBN	Q96SW2	442 aa		11.1	□□□□□ -0.63
HDLBP-233	ENST00000470710	DBF4	Q9UBU7	674 aa	Predicted RBP	11.1	□□□□□ -0.63
HDLBP-233	ENST00000470710	UBR2	Q8IWV8	1755 aa		11.09	□□□□□ -0.63
HDLBP-233	ENST00000470710	PTCD1	O75127	700 aa	Known RBP	11.09	□□□□□ -0.63
HDLBP-233	ENST00000470710	RXRB	P28702	533 aa		11.09	□□□□□ -0.63
HDLBP-233	ENST00000470710	FLII	Q13045	1269 aa		11.09	□□□□□ -0.63
HDLBP-233	ENST00000470710	EXOC6	Q8TAG9	804 aa		11.09	□□□□□ -0.63
HDLBP-233	ENST00000470710	NECTIN2	Q92692	538 aa		11.09	□□□□□ -0.63
HDLBP-233	ENST00000470710	SMARCC1	Q92922	1105 aa	Predicted RBP	11.09	□□□□□ -0.63
HDLBP-233	ENST00000470710	ACSBG1	Q96GR2	724 aa		11.09	□□□□□ -0.63
HDLBP-233	ENST00000470710	TEX13A	Q9BXU3	409 aa	Predicted RBP	11.09	□□□□□ -0.63

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