RNA–Protein interactions for RNA: ENST00000470537.1

XRN1-208, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 2

Gene XRN1, Length 669 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-208ENST00000470537 MAP3K5Q99683 1374 aa12.63□□□□□ -0.39
XRN1-208ENST00000470537 IL2RBP14784 551 aa12.62□□□□□ -0.39
XRN1-208ENST00000470537 MS4A4AQ96JQ5 239 aa12.62□□□□□ -0.39
XRN1-208ENST00000470537 NLRP2Q9NX02 1062 aa12.62□□□□□ -0.39
XRN1-208ENST00000470537 SLC27A3Q5K4L6 730 aa12.61□□□□□ -0.39
XRN1-208ENST00000470537 TMEM92Q6UXU6 159 aa12.61□□□□□ -0.39
XRN1-208ENST00000470537 COL18A1P39060 1754 aa12.61□□□□□ -0.39
XRN1-208ENST00000470537 KTN1Q86UP2 1357 aaKnown RBP12.6□□□□□ -0.39
XRN1-208ENST00000470537 ABCC6O95255 1503 aa12.6□□□□□ -0.39
XRN1-208ENST00000470537 TNS2Q63HR2 1409 aa12.6□□□□□ -0.39
XRN1-208ENST00000470537 QRICH2Q9H0J4 1663 aa12.6□□□□□ -0.39
XRN1-208ENST00000470537 MYOM1P52179 1685 aa12.59□□□□□ -0.39
XRN1-208ENST00000470537 GIGYF1O75420 1035 aaPredicted RBP12.59□□□□□ -0.39
XRN1-208ENST00000470537 ACSBG1Q96GR2 724 aa12.59□□□□□ -0.39
XRN1-208ENST00000470537 GRIN3BO60391 1043 aa12.58□□□□□ -0.4
XRN1-208ENST00000470537 KAT6BQ8WYB5 2073 aa12.58□□□□□ -0.4
XRN1-208ENST00000470537 WNK3Q9BYP7 1800 aa12.58□□□□□ -0.4
XRN1-208ENST00000470537 PIK3C2AO00443 1686 aa12.57□□□□□ -0.4
XRN1-208ENST00000470537 TFCP2L1Q9NZI6 479 aa12.57□□□□□ -0.4
XRN1-208ENST00000470537 TRPM1Q7Z4N2 1603 aa12.57□□□□□ -0.4
XRN1-208ENST00000470537 VARS2Q5ST30 1063 aaKnown RBP12.56□□□□□ -0.4
XRN1-208ENST00000470537 HDGFL2Q7Z4V5 671 aaPredicted RBP12.56□□□□□ -0.4
XRN1-208ENST00000470537 ZSWIM6Q9HCJ5 1215 aa12.56□□□□□ -0.4
XRN1-208ENST00000470537 TAOK2Q9UL54 1235 aa12.56□□□□□ -0.4
XRN1-208ENST00000470537 ROCK2O75116 1388 aaKnown RBP12.56□□□□□ -0.4
XRN1-208ENST00000470537 USP31Q70CQ4 1352 aa12.56□□□□□ -0.4
XRN1-208ENST00000470537 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.55□□□□□ -0.4
XRN1-208ENST00000470537 ANKRD24Q8TF21 1146 aa12.55□□□□□ -0.4
XRN1-208ENST00000470537 L3MBTL2Q969R5 705 aa12.55□□□□□ -0.4
XRN1-208ENST00000470537 TERF2IPQ9NYB0 399 aa12.55□□□□□ -0.4
XRN1-208ENST00000470537 RGPD5Q99666 1765 aa12.55□□□□□ -0.4
XRN1-208ENST00000470537 NHSQ6T4R5 1651 aa12.54□□□□□ -0.4
XRN1-208ENST00000470537 DDX54Q8TDD1 881 aaKnown RBP12.54□□□□□ -0.4
XRN1-208ENST00000470537 SLC24A1O60721 1099 aa12.53□□□□□ -0.4
XRN1-208ENST00000470537 IFFO2Q5TF58 517 aa12.53□□□□□ -0.4
XRN1-208ENST00000470537 TMC1Q8TDI8 760 aa12.53□□□□□ -0.4
XRN1-208ENST00000470537 LRRC4BQ9NT99 713 aa12.53□□□□□ -0.4
XRN1-208ENST00000470537 NFAT5O94916 1531 aa12.52□□□□□ -0.4
XRN1-208ENST00000470537 ZNF827Q17R98 1081 aa12.52□□□□□ -0.41
XRN1-208ENST00000470537 SYTL4Q96C24 671 aaPredicted RBP12.52□□□□□ -0.41
XRN1-208ENST00000470537 GOLGB1Q14789 3259 aaKnown RBP12.52□□□□□ -0.41
XRN1-208ENST00000470537 IP6K1Q92551 441 aa12.51□□□□□ -0.41
XRN1-208ENST00000470537 STK24Q9Y6E0 443 aa12.51□□□□□ -0.41
XRN1-208ENST00000470537 SBNO2Q9Y2G9 1366 aa12.51□□□□□ -0.41
XRN1-208ENST00000470537 NME9Q86XW9 330 aa12.5□□□□□ -0.41
XRN1-208ENST00000470537 FLAD1Q8NFF5 587 aa12.5□□□□□ -0.41
XRN1-208ENST00000470537 PUS7Q96PZ0 661 aaKnown RBP12.5□□□□□ -0.41
XRN1-208ENST00000470537 BTAF1O14981 1849 aa12.49□□□□□ -0.41
XRN1-208ENST00000470537 PNPLA7Q6ZV29 1317 aa12.49□□□□□ -0.41
XRN1-208ENST00000470537 PRIM1P49642 420 aaKnown RBP12.49□□□□□ -0.41
XRN1-208ENST00000470537 GPR153Q6NV75 609 aa12.49□□□□□ -0.41
XRN1-208ENST00000470537 CEP350Q5VT06 3117 aa12.49□□□□□ -0.41
XRN1-208ENST00000470537 PAPPAQ13219 1627 aa12.48□□□□□ -0.41
XRN1-208ENST00000470537 EDC4Q6P2E9 1401 aaKnown RBP12.48□□□□□ -0.41
XRN1-208ENST00000470537 ANKRD36BQ8N2N9 1353 aa12.48□□□□□ -0.41
XRN1-208ENST00000470537 CGNL1Q0VF96 1302 aa12.48□□□□□ -0.41
XRN1-208ENST00000470537 FBXO22Q8NEZ5 403 aa12.48□□□□□ -0.41
XRN1-208ENST00000470537 ZCRB1Q8TBF4 217 aaKnown RBP12.48□□□□□ -0.41
XRN1-208ENST00000470537 CCNL1Q9UK58 526 aaPredicted RBP12.48□□□□□ -0.41
XRN1-208ENST00000470537 USP47Q96K76 1375 aa12.47□□□□□ -0.41
XRN1-208ENST00000470537 AMPHP49418 695 aa12.47□□□□□ -0.41
XRN1-208ENST00000470537 COG3Q96JB2 828 aa12.47□□□□□ -0.41
XRN1-208ENST00000470537 CD2APQ9Y5K6 639 aa12.47□□□□□ -0.41
XRN1-208ENST00000470537 QSER1Q2KHR3 1735 aa12.46□□□□□ -0.41
XRN1-208ENST00000470537 STK25O00506 426 aa12.46□□□□□ -0.41
XRN1-208ENST00000470537 NEUROD1Q13562 356 aa12.46□□□□□ -0.41
XRN1-208ENST00000470537 LTV1Q96GA3 475 aaPredicted RBP12.46□□□□□ -0.41
XRN1-208ENST00000470537 CARD11Q9BXL7 1154 aa12.46□□□□□ -0.41
XRN1-208ENST00000470537 SLC12A5Q9H2X9 1139 aa12.46□□□□□ -0.41
XRN1-208ENST00000470537 GPBP1L1Q9HC44 474 aaPredicted RBP12.46□□□□□ -0.41
XRN1-208ENST00000470537 MON2Q7Z3U7 1717 aa12.45□□□□□ -0.42
XRN1-208ENST00000470537 NLGN2Q8NFZ4 835 aa12.45□□□□□ -0.42
XRN1-208ENST00000470537 LTN1O94822 1766 aa12.45□□□□□ -0.42
XRN1-208ENST00000470537 ARSIQ5FYB1 569 aa12.44□□□□□ -0.42
XRN1-208ENST00000470537 ZNF687Q8N1G0 1237 aa12.44□□□□□ -0.42
XRN1-208ENST00000470537 RAPGEF4Q8WZA2 1011 aa12.44□□□□□ -0.42
XRN1-208ENST00000470537 USP54Q70EL1 1684 aa12.44□□□□□ -0.42
XRN1-208ENST00000470537 FAM208AQ9UK61 1670 aaKnown RBP12.43□□□□□ -0.42
XRN1-208ENST00000470537 ECM2O94769 699 aaPredicted RBP12.43□□□□□ -0.42
XRN1-208ENST00000470537 SIN3AQ96ST3 1273 aa12.43□□□□□ -0.42
XRN1-208ENST00000470537 MFRPQ9BY79 579 aa12.43□□□□□ -0.42
XRN1-208ENST00000470537 YBX3P16989 372 aaKnown RBP eCLIP12.42□□□□□ -0.42
XRN1-208ENST00000470537 HOXC9P31274 260 aa12.42□□□□□ -0.42
XRN1-208ENST00000470537 KCNQ4P56696 695 aa12.42□□□□□ -0.42
XRN1-208ENST00000470537 COL23A1Q86Y22 540 aaPredicted RBP12.42□□□□□ -0.42
XRN1-208ENST00000470537 RNF166Q96A37 237 aaPredicted RBP12.42□□□□□ -0.42
XRN1-208ENST00000470537 COL24A1Q17RW2 1714 aa12.42□□□□□ -0.42
XRN1-208ENST00000470537 SMARCC1Q92922 1105 aaPredicted RBP12.41□□□□□ -0.42
XRN1-208ENST00000470537 CD163L1Q9NR16 1453 aa12.4□□□□□ -0.42
XRN1-208ENST00000470537 SMG6Q86US8 1419 aaKnown RBP12.4□□□□□ -0.42
XRN1-208ENST00000470537 HSPA6P17066 643 aa12.4□□□□□ -0.42
XRN1-208ENST00000470537 TATP17735 454 aaPredicted RBP12.4□□□□□ -0.42
XRN1-208ENST00000470537 A0A1W2PP64 1363 aa12.4□□□□□ -0.42
XRN1-208ENST00000470537 MAP3K19Q56UN5 1328 aa12.39□□□□□ -0.43
XRN1-208ENST00000470537 NSD3Q9BZ95 1437 aa12.39□□□□□ -0.43
XRN1-208ENST00000470537 PCDH11XQ9BZA7 1347 aa12.38□□□□□ -0.43
XRN1-208ENST00000470537 PCDH11YQ9BZA8 1340 aa12.38□□□□□ -0.43
XRN1-208ENST00000470537 ATP10DQ9P241 1426 aa12.38□□□□□ -0.43
XRN1-208ENST00000470537 LY75O60449 1722 aa12.38□□□□□ -0.43
XRN1-208ENST00000470537 AK7Q96M32 723 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms