RNA–Protein interactions for RNA: ENST00000470258.5

NHLRC3-203, Transcript of NHL repeat containing 3, humanhuman

TSL 1 (best) BASIC

Gene NHLRC3, Length 3,298 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC3-203ENST00000470258 UGGT1Q9NYU2 1555 aa11.43□□□□□ -0.58
NHLRC3-203ENST00000470258 TPM3P06753 285 aa11.43□□□□□ -0.58
NHLRC3-203ENST00000470258 CAMK4Q16566 473 aa11.43□□□□□ -0.58
NHLRC3-203ENST00000470258 ADAMTSL3P82987 1691 aa11.42□□□□□ -0.58
NHLRC3-203ENST00000470258 UBE2HP62256 183 aa11.42□□□□□ -0.58
NHLRC3-203ENST00000470258 CUL4AQ13619 759 aa11.42□□□□□ -0.58
NHLRC3-203ENST00000470258 TERF2Q15554 542 aa11.42□□□□□ -0.58
NHLRC3-203ENST00000470258 KRT222Q8N1A0 295 aa11.42□□□□□ -0.58
NHLRC3-203ENST00000470258 PHACTR3Q96KR7 559 aa11.42□□□□□ -0.58
NHLRC3-203ENST00000470258 ZNF428Q96B54 188 aa11.42□□□□□ -0.58
NHLRC3-203ENST00000470258 ST7Q9NRC1 585 aa11.42□□□□□ -0.58
NHLRC3-203ENST00000470258 STK26Q9P289 416 aa11.42□□□□□ -0.58
NHLRC3-203ENST00000470258 EVC2Q86UK5 1308 aa11.42□□□□□ -0.58
NHLRC3-203ENST00000470258 ADGRB2O60241 1585 aa11.42□□□□□ -0.58
NHLRC3-203ENST00000470258 TRPM2O94759 1503 aa11.42□□□□□ -0.58
NHLRC3-203ENST00000470258 AGLP35573 1532 aa11.42□□□□□ -0.58
NHLRC3-203ENST00000470258 SMTNL1A8MU46 457 aa11.41□□□□□ -0.58
NHLRC3-203ENST00000470258 LUZP1Q86V48 1076 aa11.41□□□□□ -0.58
NHLRC3-203ENST00000470258 ANKRD44Q8N8A2 993 aa11.41□□□□□ -0.58
NHLRC3-203ENST00000470258 NRBP1Q9UHY1 535 aa11.41□□□□□ -0.58
NHLRC3-203ENST00000470258 GNAI1P63096 354 aa11.41□□□□□ -0.58
NHLRC3-203ENST00000470258 CEP85Q6P2H3 762 aa11.41□□□□□ -0.58
NHLRC3-203ENST00000470258 KIF18AQ8NI77 898 aa11.41□□□□□ -0.58
NHLRC3-203ENST00000470258 INTS4Q96HW7 963 aaKnown RBP11.41□□□□□ -0.58
NHLRC3-203ENST00000470258 TRIM5Q9C035 493 aa11.41□□□□□ -0.58
NHLRC3-203ENST00000470258 CERS3Q8IU89 383 aa11.41□□□□□ -0.58
NHLRC3-203ENST00000470258 AEBP1Q8IUX7 1158 aa11.41□□□□□ -0.58
NHLRC3-203ENST00000470258 EXOC6BQ9Y2D4 811 aa11.41□□□□□ -0.58
NHLRC3-203ENST00000470258 CCDC192P0DO97 292 aa11.4□□□□□ -0.58
NHLRC3-203ENST00000470258 DCTN1Q14203 1278 aa11.4□□□□□ -0.58
NHLRC3-203ENST00000470258 SLC4A10Q6U841 1118 aa11.4□□□□□ -0.58
NHLRC3-203ENST00000470258 MEIS3Q99687 375 aa11.4□□□□□ -0.58
NHLRC3-203ENST00000470258 ESYT1Q9BSJ8 1104 aa11.4□□□□□ -0.58
NHLRC3-203ENST00000470258 TRIM34Q9BYJ4 488 aa11.4□□□□□ -0.58
NHLRC3-203ENST00000470258 TCHHQ07283 1943 aa11.4□□□□□ -0.58
NHLRC3-203ENST00000470258 PDE1AP54750 535 aa11.4□□□□□ -0.58
NHLRC3-203ENST00000470258 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.4□□□□□ -0.58
NHLRC3-203ENST00000470258 VPS37CA5D8V6 355 aaPredicted RBP11.4□□□□□ -0.59
NHLRC3-203ENST00000470258 ZSCAN22P10073 491 aaPredicted RBP11.4□□□□□ -0.59
NHLRC3-203ENST00000470258 DNM1Q05193 864 aaKnown RBP11.4□□□□□ -0.59
NHLRC3-203ENST00000470258 CKAP2LQ8IYA6 745 aa11.4□□□□□ -0.59
NHLRC3-203ENST00000470258 PTCH1Q13635 1447 aa11.39□□□□□ -0.59
NHLRC3-203ENST00000470258 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.39□□□□□ -0.59
NHLRC3-203ENST00000470258 FAM83GA6ND36 823 aa11.39□□□□□ -0.59
NHLRC3-203ENST00000470258 SBNO2Q9Y2G9 1366 aa11.39□□□□□ -0.59
NHLRC3-203ENST00000470258 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.39□□□□□ -0.59
NHLRC3-203ENST00000470258 SMC3Q9UQE7 1217 aa11.39□□□□□ -0.59
NHLRC3-203ENST00000470258 FER1L4A9Z1Z3 1794 aa11.38□□□□□ -0.59
NHLRC3-203ENST00000470258 STX6O43752 255 aa11.38□□□□□ -0.59
NHLRC3-203ENST00000470258 BRPF1P55201 1214 aaPredicted RBP11.38□□□□□ -0.59
NHLRC3-203ENST00000470258 PAXIP1Q6ZW49 1069 aaPredicted RBP11.38□□□□□ -0.59
NHLRC3-203ENST00000470258 RPAP2Q8IXW5 612 aaPredicted RBP11.38□□□□□ -0.59
NHLRC3-203ENST00000470258 DNAJC2Q99543 621 aaKnown RBP11.38□□□□□ -0.59
NHLRC3-203ENST00000470258 MORC2Q9Y6X9 1032 aaPredicted RBP11.38□□□□□ -0.59
NHLRC3-203ENST00000470258 FCHSD2O94868 740 aa11.38□□□□□ -0.59
NHLRC3-203ENST00000470258 SYT1P21579 422 aa11.38□□□□□ -0.59
NHLRC3-203ENST00000470258 NFE2L2Q16236 605 aa11.38□□□□□ -0.59
NHLRC3-203ENST00000470258 CALCOCO1Q9P1Z2 691 aa11.38□□□□□ -0.59
NHLRC3-203ENST00000470258 PIK3R4Q99570 1358 aa11.38□□□□□ -0.59
NHLRC3-203ENST00000470258 FYB1O15117 783 aa11.38□□□□□ -0.59
NHLRC3-203ENST00000470258 KMT5BQ4FZB7 885 aa11.38□□□□□ -0.59
NHLRC3-203ENST00000470258 CEP135Q66GS9 1140 aa11.38□□□□□ -0.59
NHLRC3-203ENST00000470258 ZNF215Q9UL58 517 aaPredicted RBP11.38□□□□□ -0.59
NHLRC3-203ENST00000470258 ELF2Q15723 593 aa11.37□□□□□ -0.59
NHLRC3-203ENST00000470258 NSD2O96028 1365 aa11.37□□□□□ -0.59
NHLRC3-203ENST00000470258 HMMRO75330 724 aa11.37□□□□□ -0.59
NHLRC3-203ENST00000470258 MAP4K4O95819 1239 aaPredicted RBP11.37□□□□□ -0.59
NHLRC3-203ENST00000470258 ZNF397Q8NF99 534 aaPredicted RBP11.37□□□□□ -0.59
NHLRC3-203ENST00000470258 TRMT1Q9NXH9 659 aaKnown RBP11.37□□□□□ -0.59
NHLRC3-203ENST00000470258 A0A1W2PP64 1363 aa11.37□□□□□ -0.59
NHLRC3-203ENST00000470258 F13A1P00488 732 aa11.36□□□□□ -0.59
NHLRC3-203ENST00000470258 FAM200AQ8TCP9 573 aa11.36□□□□□ -0.59
NHLRC3-203ENST00000470258 GTF3C6Q969F1 213 aa11.36□□□□□ -0.59
NHLRC3-203ENST00000470258 PAXBP1Q9Y5B6 917 aa11.36□□□□□ -0.59
NHLRC3-203ENST00000470258 ATP6V1DQ9Y5K8 247 aa11.36□□□□□ -0.59
NHLRC3-203ENST00000470258 ZSCAN25Q6NSZ9 544 aa11.36□□□□□ -0.59
NHLRC3-203ENST00000470258 FERMT3Q86UX7 667 aa11.36□□□□□ -0.59
NHLRC3-203ENST00000470258 MSH6P52701 1360 aa11.36□□□□□ -0.59
NHLRC3-203ENST00000470258 CPA1P15085 419 aa11.36□□□□□ -0.59
NHLRC3-203ENST00000470258 TNNT3P45378 269 aaPredicted RBP11.36□□□□□ -0.59
NHLRC3-203ENST00000470258 ZBTB9Q96C00 473 aa11.36□□□□□ -0.59
NHLRC3-203ENST00000470258 FUCA2Q9BTY2 467 aa11.36□□□□□ -0.59
NHLRC3-203ENST00000470258 MINK1Q8N4C8 1332 aaPredicted RBP11.35□□□□□ -0.59
NHLRC3-203ENST00000470258 DEPDC5O75140 1603 aa11.35□□□□□ -0.59
NHLRC3-203ENST00000470258 RPAP1Q9BWH6 1393 aaPredicted RBP11.35□□□□□ -0.59
NHLRC3-203ENST00000470258 GOLGA6L4A6NEF3 574 aa11.35□□□□□ -0.59
NHLRC3-203ENST00000470258 TYRO3Q06418 890 aa11.35□□□□□ -0.59
NHLRC3-203ENST00000470258 MAP3K11Q16584 847 aa11.35□□□□□ -0.59
NHLRC3-203ENST00000470258 ANO6Q4KMQ2 910 aa11.35□□□□□ -0.59
NHLRC3-203ENST00000470258 FBXO38Q6PIJ6 1188 aa11.35□□□□□ -0.59
NHLRC3-203ENST00000470258 RGS12O14924 1447 aa11.35□□□□□ -0.59
NHLRC3-203ENST00000470258 CAPN2P17655 700 aa11.35□□□□□ -0.59
NHLRC3-203ENST00000470258 CHMLP26374 656 aa11.35□□□□□ -0.59
NHLRC3-203ENST00000470258 CCDC83Q8IWF9 413 aa11.35□□□□□ -0.59
NHLRC3-203ENST00000470258 TMEM87AQ8NBN3 555 aa11.35□□□□□ -0.59
NHLRC3-203ENST00000470258 NUP62CLQ9H1M0 184 aa11.35□□□□□ -0.59
NHLRC3-203ENST00000470258 CLIP2Q9UDT6 1046 aa11.35□□□□□ -0.59
NHLRC3-203ENST00000470258 MROH2AA6NES4 1674 aa11.35□□□□□ -0.59
NHLRC3-203ENST00000470258 FAM173BQ6P4H8 233 aa11.34□□□□□ -0.59
NHLRC3-203ENST00000470258 ZFP91Q96JP5 570 aaPredicted RBP11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms