RNA–Protein interactions for RNA: ENST00000470188.5

CDHR3-207, Transcript of cadherin related family member 3, humanhuman

TSL 2

Gene CDHR3, Length 2,199 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-207ENST00000470188 NECTIN2Q92692 538 aa24.85■■□□□ 1.57
CDHR3-207ENST00000470188 ISY1Q9ULR0 285 aaKnown RBP24.85■■□□□ 1.57
CDHR3-207ENST00000470188 NCOA3Q9Y6Q9 1424 aa24.85■■□□□ 1.57
CDHR3-207ENST00000470188 GNAI2P04899 355 aa24.84■■□□□ 1.57
CDHR3-207ENST00000470188 KCNH5Q8NCM2 988 aa24.84■■□□□ 1.57
CDHR3-207ENST00000470188 MRE11P49959 708 aa24.83■■□□□ 1.57
CDHR3-207ENST00000470188 TRAK2O60296 914 aa24.83■■□□□ 1.56
CDHR3-207ENST00000470188 NBPF6Q5VWK0 638 aa24.83■■□□□ 1.56
CDHR3-207ENST00000470188 NBPF4Q96M43 638 aa24.83■■□□□ 1.56
CDHR3-207ENST00000470188 DDX11L8A8MPP1 907 aa24.81■■□□□ 1.56
CDHR3-207ENST00000470188 ZBTB7CA1YPR0 619 aa24.81■■□□□ 1.56
CDHR3-207ENST00000470188 HSP90AB1P08238 724 aaKnown RBP24.81■■□□□ 1.56
CDHR3-207ENST00000470188 NPHP4O75161 1426 aaPredicted RBP24.8■■□□□ 1.56
CDHR3-207ENST00000470188 GNAI3P08754 354 aa24.8■■□□□ 1.56
CDHR3-207ENST00000470188 CEMIPQ8WUJ3 1361 aa24.8■■□□□ 1.56
CDHR3-207ENST00000470188 SDSP20132 328 aa24.78■■□□□ 1.56
CDHR3-207ENST00000470188 DDIT3P35638 169 aa24.78■■□□□ 1.56
CDHR3-207ENST00000470188 HDGFL1Q5TGJ6 251 aa24.78■■□□□ 1.56
CDHR3-207ENST00000470188 CASC1Q6TDU7 716 aa24.77■■□□□ 1.56
CDHR3-207ENST00000470188 PXDNLA1KZ92 1463 aa24.76■■□□□ 1.55
CDHR3-207ENST00000470188 CACNA1FO60840 1977 aa24.76■■□□□ 1.55
CDHR3-207ENST00000470188 PHRF1Q9P1Y6 1649 aaKnown RBP24.76■■□□□ 1.55
CDHR3-207ENST00000470188 RBM42Q9BTD8 480 aaKnown RBP24.76■■□□□ 1.55
CDHR3-207ENST00000470188 GZF1Q9H116 711 aaPredicted RBP24.76■■□□□ 1.55
CDHR3-207ENST00000470188 CD2BP2O95400 341 aaKnown RBP24.75■■□□□ 1.55
CDHR3-207ENST00000470188 ORAI2Q96SN7 254 aa24.75■■□□□ 1.55
CDHR3-207ENST00000470188 PANK2Q9BZ23 570 aa24.75■■□□□ 1.55
CDHR3-207ENST00000470188 K7ELQ4 463 aaPredicted RBP24.74■■□□□ 1.55
CDHR3-207ENST00000470188 LGR6Q9HBX8 967 aa24.74■■□□□ 1.55
CDHR3-207ENST00000470188 EXOC6BQ9Y2D4 811 aa24.74■■□□□ 1.55
CDHR3-207ENST00000470188 MED1Q15648 1581 aaPredicted RBP24.74■■□□□ 1.55
CDHR3-207ENST00000470188 LRRC59Q96AG4 307 aaKnown RBP24.74■■□□□ 1.55
CDHR3-207ENST00000470188 OSBPL3Q9H4L5 887 aa24.74■■□□□ 1.55
CDHR3-207ENST00000470188 ATP8B2P98198 1209 aa24.73■■□□□ 1.55
CDHR3-207ENST00000470188 CIZ1Q9ULV3 898 aaPredicted RBP24.73■■□□□ 1.55
CDHR3-207ENST00000470188 GCP02774 474 aa24.73■■□□□ 1.55
CDHR3-207ENST00000470188 PDE1AP54750 535 aa24.73■■□□□ 1.55
CDHR3-207ENST00000470188 XPCQ01831 940 aaPredicted RBP24.73■■□□□ 1.55
CDHR3-207ENST00000470188 USP26Q9BXU7 913 aa24.73■■□□□ 1.55
CDHR3-207ENST00000470188 HSP90AA1P07900 732 aaKnown RBP24.72■■□□□ 1.55
CDHR3-207ENST00000470188 EIF4A1P60842 406 aaKnown RBP24.72■■□□□ 1.55
CDHR3-207ENST00000470188 ARXQ96QS3 562 aa24.72■■□□□ 1.55
CDHR3-207ENST00000470188 N4BP2Q86UW6 1770 aaPredicted RBP24.72■■□□□ 1.55
CDHR3-207ENST00000470188 PNMA6EA0A0J9YXQ4 647 aa24.71■■□□□ 1.55
CDHR3-207ENST00000470188 AKAP4Q5JQC9 854 aa24.71■■□□□ 1.55
CDHR3-207ENST00000470188 ZNF530Q6P9A1 599 aaPredicted RBP24.71■■□□□ 1.55
CDHR3-207ENST00000470188 PHAXQ9H814 394 aaKnown RBP24.71■■□□□ 1.55
CDHR3-207ENST00000470188 GRPEL1Q9HAV7 217 aa24.71■■□□□ 1.55
CDHR3-207ENST00000470188 GLIPR1L2Q4G1C9 344 aa24.71■■□□□ 1.55
CDHR3-207ENST00000470188 PLEKHO1Q53GL0 409 aaPredicted RBP24.71■■□□□ 1.55
CDHR3-207ENST00000470188 ARHGEF25Q86VW2 580 aa24.71■■□□□ 1.55
CDHR3-207ENST00000470188 NAP1L5Q96NT1 182 aaPredicted RBP24.71■■□□□ 1.55
CDHR3-207ENST00000470188 LRRCC1Q9C099 1032 aa24.71■■□□□ 1.55
CDHR3-207ENST00000470188 LRRFIP2Q9Y608 721 aaKnown RBP24.71■■□□□ 1.55
CDHR3-207ENST00000470188 RABEP1Q15276 862 aa24.7■■□□□ 1.55
CDHR3-207ENST00000470188 HOXB7P09629 217 aa24.7■■□□□ 1.54
CDHR3-207ENST00000470188 EIF2S2P20042 333 aaKnown RBP24.7■■□□□ 1.54
CDHR3-207ENST00000470188 USP44Q9H0E7 712 aa24.7■■□□□ 1.54
CDHR3-207ENST00000470188 SLIT3O75094 1523 aa24.7■■□□□ 1.54
CDHR3-207ENST00000470188 RGPD2P0DJD1 1756 aa24.7■■□□□ 1.54
CDHR3-207ENST00000470188 PLEKHG5O94827 1062 aa24.69■■□□□ 1.54
CDHR3-207ENST00000470188 UBTFL1P0CB47 393 aaPredicted RBP24.69■■□□□ 1.54
CDHR3-207ENST00000470188 TEFQ10587 303 aa24.69■■□□□ 1.54
CDHR3-207ENST00000470188 PTMSP20962 102 aa24.69■■□□□ 1.54
CDHR3-207ENST00000470188 LMOD2Q6P5Q4 547 aa24.69■■□□□ 1.54
CDHR3-207ENST00000470188 CHMP4AQ9BY43 222 aa24.69■■□□□ 1.54
CDHR3-207ENST00000470188 LMO7Q8WWI1 1683 aa24.68■■□□□ 1.54
CDHR3-207ENST00000470188 IBTKQ9P2D0 1353 aaPredicted RBP24.68■■□□□ 1.54
CDHR3-207ENST00000470188 AMOTQ4VCS5 1084 aa24.68■■□□□ 1.54
CDHR3-207ENST00000470188 KDM3BQ7LBC6 1761 aa24.68■■□□□ 1.54
CDHR3-207ENST00000470188 REC8O95072 547 aa24.67■■□□□ 1.54
CDHR3-207ENST00000470188 SALL3Q9BXA9 1300 aa24.67■■□□□ 1.54
CDHR3-207ENST00000470188 BTBD11A6QL63 1104 aa24.66■■□□□ 1.54
CDHR3-207ENST00000470188 HSPA2P54652 639 aa24.66■■□□□ 1.54
CDHR3-207ENST00000470188 MPRIPQ6WCQ1 1025 aa24.66■■□□□ 1.54
CDHR3-207ENST00000470188 NCAPD2Q15021 1401 aa24.66■■□□□ 1.54
CDHR3-207ENST00000470188 KCNQ3O43525 872 aa24.66■■□□□ 1.54
CDHR3-207ENST00000470188 ANKRD24Q8TF21 1146 aa24.66■■□□□ 1.54
CDHR3-207ENST00000470188 SRCIN1Q9C0H9 1055 aa24.66■■□□□ 1.54
CDHR3-207ENST00000470188 FOXD4L1Q9NU39 408 aa24.66■■□□□ 1.54
CDHR3-207ENST00000470188 CHPF2Q9P2E5 772 aa24.66■■□□□ 1.54
CDHR3-207ENST00000470188 ERC2O15083 957 aa24.65■■□□□ 1.54
CDHR3-207ENST00000470188 C1orf141Q5JVX7 400 aa24.65■■□□□ 1.54
CDHR3-207ENST00000470188 MX1P20591 662 aa24.64■■□□□ 1.54
CDHR3-207ENST00000470188 RAB3GAP1Q15042 981 aa24.64■■□□□ 1.54
CDHR3-207ENST00000470188 SKOR2Q2VWA4 1001 aaPredicted RBP24.64■■□□□ 1.54
CDHR3-207ENST00000470188 PROSER2Q86WR7 435 aaPredicted RBP24.64■■□□□ 1.54
CDHR3-207ENST00000470188 TNPO1Q92973 898 aaKnown RBP24.64■■□□□ 1.54
CDHR3-207ENST00000470188 GBP4Q96PP9 640 aa24.64■■□□□ 1.53
CDHR3-207ENST00000470188 TSHZ3Q63HK5 1081 aa24.63■■□□□ 1.53
CDHR3-207ENST00000470188 KRT28Q7Z3Y7 464 aa24.63■■□□□ 1.53
CDHR3-207ENST00000470188 LMTK3Q96Q04 1460 aa24.63■■□□□ 1.53
CDHR3-207ENST00000470188 PXDNQ92626 1479 aa24.63■■□□□ 1.53
CDHR3-207ENST00000470188 ESPNB1AK53 854 aa24.63■■□□□ 1.53
CDHR3-207ENST00000470188 RNMTO43148 476 aaKnown RBP24.63■■□□□ 1.53
CDHR3-207ENST00000470188 RRP9O43818 475 aaKnown RBP24.62■■□□□ 1.53
CDHR3-207ENST00000470188 SSH3Q8TE77 659 aa24.61■■□□□ 1.53
CDHR3-207ENST00000470188 TRPM3Q9HCF6 1732 aaPredicted RBP24.61■■□□□ 1.53
CDHR3-207ENST00000470188 OVOS2A0A0G2JMS6 1433 aa24.6■■□□□ 1.53
CDHR3-207ENST00000470188 DNAAF4Q8WXU2 420 aa24.6■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms