RNA–Protein interactions for RNA: ENST00000469930.1

BRAF-202, Transcript of B-Raf proto-oncogene, serine/threonine kinase, humanhuman

TSL 2

Gene BRAF, Length 1,058 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAF-202ENST00000469930 CHL1O00533 1208 aa27.14■■□□□ 1.94
BRAF-202ENST00000469930 CABP4P57796 275 aa27.13■■□□□ 1.93
BRAF-202ENST00000469930 SLFN5Q08AF3 891 aa27.13■■□□□ 1.93
BRAF-202ENST00000469930 FAM196AQ6ZSG2 479 aa27.13■■□□□ 1.93
BRAF-202ENST00000469930 NFATC2IPQ8NCF5 419 aa27.1■■□□□ 1.93
BRAF-202ENST00000469930 MYH16Q9H6N6 1097 aa27.1■■□□□ 1.93
BRAF-202ENST00000469930 DOT1LQ8TEK3 1739 aa27.09■■□□□ 1.93
BRAF-202ENST00000469930 ITGB4P16144 1822 aa27.09■■□□□ 1.93
BRAF-202ENST00000469930 SPINK5Q9NQ38 1064 aaPredicted RBP27.08■■□□□ 1.93
BRAF-202ENST00000469930 TMOD3Q9NYL9 352 aa27.08■■□□□ 1.93
BRAF-202ENST00000469930 PRIM1P49642 420 aaKnown RBP27.07■■□□□ 1.92
BRAF-202ENST00000469930 NHSQ6T4R5 1651 aa27.06■■□□□ 1.92
BRAF-202ENST00000469930 BTBD11A6QL63 1104 aa27.06■■□□□ 1.92
BRAF-202ENST00000469930 CDCA7LQ96GN5 454 aa27.06■■□□□ 1.92
BRAF-202ENST00000469930 SBF2Q86WG5 1849 aa27.06■■□□□ 1.92
BRAF-202ENST00000469930 PIGBQ92521 554 aa27.05■■□□□ 1.92
BRAF-202ENST00000469930 KDM3BQ7LBC6 1761 aa27.04■■□□□ 1.92
BRAF-202ENST00000469930 DUSP27Q5VZP5 1158 aa27.04■■□□□ 1.92
BRAF-202ENST00000469930 MBIPQ9NS73 344 aa27.04■■□□□ 1.92
BRAF-202ENST00000469930 PAPPAQ13219 1627 aa27.03■■□□□ 1.92
BRAF-202ENST00000469930 TSPYL4Q9UJ04 414 aa27.03■■□□□ 1.92
BRAF-202ENST00000469930 FANCIQ9NVI1 1328 aa27.02■■□□□ 1.92
BRAF-202ENST00000469930 BCL11BQ9C0K0 894 aaPredicted RBP27.02■■□□□ 1.92
BRAF-202ENST00000469930 FAM182BQ5T319 152 aa27.01■■□□□ 1.91
BRAF-202ENST00000469930 ZNF790Q6PG37 636 aa27.01■■□□□ 1.91
BRAF-202ENST00000469930 ACSBG1Q96GR2 724 aa27■■□□□ 1.91
BRAF-202ENST00000469930 LAS1LQ9Y4W2 734 aaKnown RBP27■■□□□ 1.91
BRAF-202ENST00000469930 HEG1Q9ULI3 1381 aa26.99■■□□□ 1.91
BRAF-202ENST00000469930 SOS1Q07889 1333 aaPredicted RBP26.99■■□□□ 1.91
BRAF-202ENST00000469930 KCNQ2O43526 872 aa26.99■■□□□ 1.91
BRAF-202ENST00000469930 MIS18AQ9NYP9 233 aa26.99■■□□□ 1.91
BRAF-202ENST00000469930 EIF4A1P60842 406 aaKnown RBP26.98■■□□□ 1.91
BRAF-202ENST00000469930 CT47B1P0C2W7 299 aaPredicted RBP26.97■■□□□ 1.91
BRAF-202ENST00000469930 SMARCC1Q92922 1105 aaPredicted RBP26.97■■□□□ 1.91
BRAF-202ENST00000469930 SYTL4Q96C24 671 aaPredicted RBP26.97■■□□□ 1.91
BRAF-202ENST00000469930 ATG3Q9NT62 314 aa26.97■■□□□ 1.91
BRAF-202ENST00000469930 UBR2Q8IWV8 1755 aa26.97■■□□□ 1.91
BRAF-202ENST00000469930 TSR2Q969E8 191 aaKnown RBP26.96■■□□□ 1.91
BRAF-202ENST00000469930 TTC5Q8N0Z6 440 aa26.95■■□□□ 1.9
BRAF-202ENST00000469930 KCNQ3O43525 872 aa26.94■■□□□ 1.9
BRAF-202ENST00000469930 HOXB7P09629 217 aa26.94■■□□□ 1.9
BRAF-202ENST00000469930 VSIG10Q8N0Z9 540 aa26.94■■□□□ 1.9
BRAF-202ENST00000469930 ASAP1Q9ULH1 1129 aa26.94■■□□□ 1.9
BRAF-202ENST00000469930 KCPQ6ZWJ8 1503 aa26.94■■□□□ 1.9
BRAF-202ENST00000469930 SLC39A6Q13433 755 aa26.93■■□□□ 1.9
BRAF-202ENST00000469930 FMNL2Q96PY5 1086 aa26.93■■□□□ 1.9
BRAF-202ENST00000469930 BTAF1O14981 1849 aa26.93■■□□□ 1.9
BRAF-202ENST00000469930 KAT6BQ8WYB5 2073 aa26.91■■□□□ 1.9
BRAF-202ENST00000469930 EXOSC9Q06265 439 aaKnown RBP26.91■■□□□ 1.9
BRAF-202ENST00000469930 ZNF428Q96B54 188 aa26.91■■□□□ 1.9
BRAF-202ENST00000469930 ZNF831Q5JPB2 1677 aa26.91■■□□□ 1.9
BRAF-202ENST00000469930 TRIM37O94972 964 aa26.9■■□□□ 1.9
BRAF-202ENST00000469930 PTF1AQ7RTS3 328 aa26.9■■□□□ 1.9
BRAF-202ENST00000469930 ZNF496Q96IT1 587 aaPredicted RBP26.9■■□□□ 1.9
BRAF-202ENST00000469930 CHMP4AQ9BY43 222 aa26.9■■□□□ 1.9
BRAF-202ENST00000469930 GIGYF1O75420 1035 aaPredicted RBP26.89■■□□□ 1.9
BRAF-202ENST00000469930 C8orf58Q8NAV2 365 aa26.89■■□□□ 1.9
BRAF-202ENST00000469930 CICQ96RK0 1608 aaPredicted RBP26.89■■□□□ 1.9
BRAF-202ENST00000469930 PALLDQ8WX93 1383 aa26.87■■□□□ 1.89
BRAF-202ENST00000469930 PLSCR1O15162 318 aa26.87■■□□□ 1.89
BRAF-202ENST00000469930 VAMP4O75379 141 aa26.87■■□□□ 1.89
BRAF-202ENST00000469930 SNRPA1P09661 255 aaKnown RBP26.87■■□□□ 1.89
BRAF-202ENST00000469930 TEX13AQ9BXU3 409 aaPredicted RBP26.87■■□□□ 1.89
BRAF-202ENST00000469930 TWISTNBQ3B726 338 aaPredicted RBP26.86■■□□□ 1.89
BRAF-202ENST00000469930 CCDC125Q86Z20 511 aa26.85■■□□□ 1.89
BRAF-202ENST00000469930 TSPYL6Q8N831 410 aa26.85■■□□□ 1.89
BRAF-202ENST00000469930 LY75O60449 1722 aa26.85■■□□□ 1.89
BRAF-202ENST00000469930 HMGB2P26583 209 aaKnown RBP26.84■■□□□ 1.89
BRAF-202ENST00000469930 TNS1Q9HBL0 1735 aaKnown RBP26.84■■□□□ 1.89
BRAF-202ENST00000469930 LOC102724428A0A0B4J2F2 783 aa26.83■■□□□ 1.89
BRAF-202ENST00000469930 SIK1P57059 783 aa26.83■■□□□ 1.89
BRAF-202ENST00000469930 KRT24Q2M2I5 525 aa26.83■■□□□ 1.89
BRAF-202ENST00000469930 RGPD3A6NKT7 1758 aaPredicted RBP26.82■■□□□ 1.88
BRAF-202ENST00000469930 RGPD4Q7Z3J3 1758 aa26.82■■□□□ 1.88
BRAF-202ENST00000469930 PTCD1O75127 700 aaKnown RBP26.82■■□□□ 1.88
BRAF-202ENST00000469930 SLC4A9Q96Q91 983 aa26.82■■□□□ 1.88
BRAF-202ENST00000469930 EP400Q96L91 3159 aa26.81■■□□□ 1.88
BRAF-202ENST00000469930 ALDH1L2Q3SY69 923 aa26.8■■□□□ 1.88
BRAF-202ENST00000469930 RBM42Q9BTD8 480 aaKnown RBP26.8■■□□□ 1.88
BRAF-202ENST00000469930 SLC27A3Q5K4L6 730 aa26.79■■□□□ 1.88
BRAF-202ENST00000469930 LAMB4A4D0S4 1761 aa26.79■■□□□ 1.88
BRAF-202ENST00000469930 CENPBP07199 599 aaPredicted RBP26.78■■□□□ 1.88
BRAF-202ENST00000469930 BRPF1P55201 1214 aaPredicted RBP26.78■■□□□ 1.88
BRAF-202ENST00000469930 ERBB4Q15303 1308 aa26.78■■□□□ 1.88
BRAF-202ENST00000469930 TJP1Q07157 1748 aa26.77■■□□□ 1.88
BRAF-202ENST00000469930 ELL2O00472 640 aaPredicted RBP26.77■■□□□ 1.88
BRAF-202ENST00000469930 APBA3O96018 575 aa26.77■■□□□ 1.88
BRAF-202ENST00000469930 C5P01031 1676 aa26.76■■□□□ 1.87
BRAF-202ENST00000469930 ATP6V1AP38606 617 aa26.76■■□□□ 1.87
BRAF-202ENST00000469930 CCDC30Q5VVM6 783 aa26.76■■□□□ 1.87
BRAF-202ENST00000469930 USP16Q9Y5T5 823 aa26.76■■□□□ 1.87
BRAF-202ENST00000469930 STARD3NLO95772 234 aa26.75■■□□□ 1.87
BRAF-202ENST00000469930 RARSP54136 660 aaKnown RBP26.75■■□□□ 1.87
BRAF-202ENST00000469930 PRAMEF22A3QJZ6 481 aa26.74■■□□□ 1.87
BRAF-202ENST00000469930 CYP19A1P11511 503 aaPredicted RBP26.74■■□□□ 1.87
BRAF-202ENST00000469930 HDGFL1Q5TGJ6 251 aa26.74■■□□□ 1.87
BRAF-202ENST00000469930 DNAJC10Q8IXB1 793 aa26.74■■□□□ 1.87
BRAF-202ENST00000469930 ITPK1Q13572 414 aa26.73■■□□□ 1.87
BRAF-202ENST00000469930 CCNL1Q9UK58 526 aaPredicted RBP26.73■■□□□ 1.87
BRAF-202ENST00000469930 RCAN3Q9UKA8 241 aa26.73■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms