RNA–Protein interactions for RNA: ENST00000469757.1

TRAPPC3-206, Transcript of trafficking protein particle complex 3, humanhuman

TSL 2

Gene TRAPPC3, Length 221 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-206ENST00000469757 SLC52A2Q9HAB3 445 aa11.05□□□□□ -0.64
TRAPPC3-206ENST00000469757 LRRC4BQ9NT99 713 aa11.05□□□□□ -0.64
TRAPPC3-206ENST00000469757 GNAT3A8MTJ3 354 aa11.04□□□□□ -0.64
TRAPPC3-206ENST00000469757 RNMTO43148 476 aaKnown RBP11.04□□□□□ -0.64
TRAPPC3-206ENST00000469757 LAMB4A4D0S4 1761 aa11.03□□□□□ -0.64
TRAPPC3-206ENST00000469757 HTATSF1O43719 755 aaKnown RBP11.03□□□□□ -0.64
TRAPPC3-206ENST00000469757 AKT1S1Q96B36 256 aa11.03□□□□□ -0.64
TRAPPC3-206ENST00000469757 PNNQ9H307 717 aaKnown RBP11.03□□□□□ -0.64
TRAPPC3-206ENST00000469757 ATG3Q9NT62 314 aa11.03□□□□□ -0.64
TRAPPC3-206ENST00000469757 KAT6BQ8WYB5 2073 aa11.02□□□□□ -0.64
TRAPPC3-206ENST00000469757 C4AP0C0L4 1744 aa11.02□□□□□ -0.65
TRAPPC3-206ENST00000469757 ANP32CO43423 234 aa11.02□□□□□ -0.65
TRAPPC3-206ENST00000469757 HMGB2P26583 209 aaKnown RBP11.02□□□□□ -0.65
TRAPPC3-206ENST00000469757 NFE2L2Q16236 605 aa11.02□□□□□ -0.65
TRAPPC3-206ENST00000469757 CCNL1Q9UK58 526 aaPredicted RBP11.02□□□□□ -0.65
TRAPPC3-206ENST00000469757 ASAP1Q9ULH1 1129 aa11.02□□□□□ -0.65
TRAPPC3-206ENST00000469757 MAPK8IP3Q9UPT6 1336 aa11.02□□□□□ -0.65
TRAPPC3-206ENST00000469757 LOC102724428A0A0B4J2F2 783 aa11.01□□□□□ -0.65
TRAPPC3-206ENST00000469757 SIK1P57059 783 aa11.01□□□□□ -0.65
TRAPPC3-206ENST00000469757 CABP4P57796 275 aa11.01□□□□□ -0.65
TRAPPC3-206ENST00000469757 WDR43Q15061 677 aaKnown RBP eCLIP11.01□□□□□ -0.65
TRAPPC3-206ENST00000469757 ZNF827Q17R98 1081 aa11.01□□□□□ -0.65
TRAPPC3-206ENST00000469757 NBPF14Q5TI25 921 aa11.01□□□□□ -0.65
TRAPPC3-206ENST00000469757 IL17REQ8NFR9 667 aa11.01□□□□□ -0.65
TRAPPC3-206ENST00000469757 LGR6Q9HBX8 967 aa11.01□□□□□ -0.65
TRAPPC3-206ENST00000469757 R3HDM1Q15032 1099 aaKnown RBP11□□□□□ -0.65
TRAPPC3-206ENST00000469757 SLC15A2Q16348 729 aa11□□□□□ -0.65
TRAPPC3-206ENST00000469757 NFATC2IPQ8NCF5 419 aa11□□□□□ -0.65
TRAPPC3-206ENST00000469757 NEFMP07197 916 aa10.99□□□□□ -0.65
TRAPPC3-206ENST00000469757 ITPK1Q13572 414 aa10.99□□□□□ -0.65
TRAPPC3-206ENST00000469757 CCDC184Q52MB2 194 aa10.99□□□□□ -0.65
TRAPPC3-206ENST00000469757 RUNDC1Q96C34 613 aa10.99□□□□□ -0.65
TRAPPC3-206ENST00000469757 SLC4A9Q96Q91 983 aa10.99□□□□□ -0.65
TRAPPC3-206ENST00000469757 STK32BQ9NY57 414 aa10.99□□□□□ -0.65
TRAPPC3-206ENST00000469757 CNTNAP4Q9C0A0 1308 aa10.99□□□□□ -0.65
TRAPPC3-206ENST00000469757 SCN7AQ01118 1682 aa10.98□□□□□ -0.65
TRAPPC3-206ENST00000469757 PSDA5PKW4 1024 aaPredicted RBP10.98□□□□□ -0.65
TRAPPC3-206ENST00000469757 TEFQ10587 303 aa10.98□□□□□ -0.65
TRAPPC3-206ENST00000469757 ADAMTS8Q9UP79 889 aa10.98□□□□□ -0.65
TRAPPC3-206ENST00000469757 PNPLA7Q6ZV29 1317 aa10.98□□□□□ -0.65
TRAPPC3-206ENST00000469757 SRCAPQ6ZRS2 3230 aa10.97□□□□□ -0.65
TRAPPC3-206ENST00000469757 MYH14Q7Z406 1995 aaKnown RBP10.97□□□□□ -0.65
TRAPPC3-206ENST00000469757 TMPOP42166 694 aaKnown RBP10.97□□□□□ -0.65
TRAPPC3-206ENST00000469757 MCM10Q7L590 875 aa10.97□□□□□ -0.65
TRAPPC3-206ENST00000469757 VSIG10Q8N0Z9 540 aa10.97□□□□□ -0.65
TRAPPC3-206ENST00000469757 LINC00116Q8NCU8 138 aa10.97□□□□□ -0.65
TRAPPC3-206ENST00000469757 PNISRQ8TF01 805 aaKnown RBP10.97□□□□□ -0.65
TRAPPC3-206ENST00000469757 RTF1Q92541 710 aaKnown RBP10.97□□□□□ -0.65
TRAPPC3-206ENST00000469757 HEG1Q9ULI3 1381 aa10.96□□□□□ -0.65
TRAPPC3-206ENST00000469757 KCNQ4P56696 695 aa10.96□□□□□ -0.65
TRAPPC3-206ENST00000469757 LMOD3Q0VAK6 560 aa10.96□□□□□ -0.65
TRAPPC3-206ENST00000469757 ZNF790Q6PG37 636 aa10.96□□□□□ -0.65
TRAPPC3-206ENST00000469757 MRS2Q9HD23 443 aa10.96□□□□□ -0.65
TRAPPC3-206ENST00000469757 SSFA2P28290 1259 aa10.95□□□□□ -0.66
TRAPPC3-206ENST00000469757 ATP6V1AP38606 617 aa10.95□□□□□ -0.66
TRAPPC3-206ENST00000469757 NCBP3Q53F19 620 aaKnown RBP10.95□□□□□ -0.66
TRAPPC3-206ENST00000469757 RC3H1Q5TC82 1133 aaKnown RBP10.95□□□□□ -0.66
TRAPPC3-206ENST00000469757 BCORQ6W2J9 1755 aa10.95□□□□□ -0.66
TRAPPC3-206ENST00000469757 SLC39A6Q13433 755 aa10.94□□□□□ -0.66
TRAPPC3-206ENST00000469757 DCTN1Q14203 1278 aa10.94□□□□□ -0.66
TRAPPC3-206ENST00000469757 CCDC146Q8IYE0 955 aa10.94□□□□□ -0.66
TRAPPC3-206ENST00000469757 ZNF496Q96IT1 587 aaPredicted RBP10.94□□□□□ -0.66
TRAPPC3-206ENST00000469757 PDGFDQ9GZP0 370 aaPredicted RBP10.94□□□□□ -0.66
TRAPPC3-206ENST00000469757 BABAM1Q9NWV8 329 aa10.94□□□□□ -0.66
TRAPPC3-206ENST00000469757 TRIM35Q9UPQ4 493 aa10.94□□□□□ -0.66
TRAPPC3-206ENST00000469757 PTCD1O75127 700 aaKnown RBP10.93□□□□□ -0.66
TRAPPC3-206ENST00000469757 ADRA2BP18089 450 aa10.93□□□□□ -0.66
TRAPPC3-206ENST00000469757 AMIGO3Q86WK7 504 aa10.93□□□□□ -0.66
TRAPPC3-206ENST00000469757 TTC5Q8N0Z6 440 aa10.93□□□□□ -0.66
TRAPPC3-206ENST00000469757 FLAD1Q8NFF5 587 aa10.93□□□□□ -0.66
TRAPPC3-206ENST00000469757 SLC16A10Q8TF71 515 aa10.93□□□□□ -0.66
TRAPPC3-206ENST00000469757 AK7Q96M32 723 aa10.93□□□□□ -0.66
TRAPPC3-206ENST00000469757 SGIP1Q9BQI5 828 aa10.93□□□□□ -0.66
TRAPPC3-206ENST00000469757 RBM42Q9BTD8 480 aaKnown RBP10.93□□□□□ -0.66
TRAPPC3-206ENST00000469757 BTBD11A6QL63 1104 aa10.92□□□□□ -0.66
TRAPPC3-206ENST00000469757 CCER2I3L3R5 266 aa10.92□□□□□ -0.66
TRAPPC3-206ENST00000469757 CYP19A1P11511 503 aaPredicted RBP10.92□□□□□ -0.66
TRAPPC3-206ENST00000469757 RIPK4P57078 832 aa10.92□□□□□ -0.66
TRAPPC3-206ENST00000469757 TAF7Q15545 349 aaPredicted RBP10.92□□□□□ -0.66
TRAPPC3-206ENST00000469757 FMNL2Q96PY5 1086 aa10.92□□□□□ -0.66
TRAPPC3-206ENST00000469757 THUMPD2Q9BTF0 503 aaKnown RBP10.92□□□□□ -0.66
TRAPPC3-206ENST00000469757 MTFR1LQ9H019 292 aa10.92□□□□□ -0.66
TRAPPC3-206ENST00000469757 TFCP2L1Q9NZI6 479 aa10.92□□□□□ -0.66
TRAPPC3-206ENST00000469757 SOS1Q07889 1333 aaPredicted RBP10.91□□□□□ -0.66
TRAPPC3-206ENST00000469757 GNPATO15228 680 aa10.91□□□□□ -0.66
TRAPPC3-206ENST00000469757 PTGER2P43116 358 aa10.91□□□□□ -0.66
TRAPPC3-206ENST00000469757 CRKLP46109 303 aaKnown RBP10.91□□□□□ -0.66
TRAPPC3-206ENST00000469757 CCDC27Q2M243 656 aa10.91□□□□□ -0.66
TRAPPC3-206ENST00000469757 DNAJC10Q8IXB1 793 aa10.91□□□□□ -0.66
TRAPPC3-206ENST00000469757 COL15A1P39059 1388 aa10.9□□□□□ -0.66
TRAPPC3-206ENST00000469757 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.9□□□□□ -0.66
TRAPPC3-206ENST00000469757 INTS5Q6P9B9 1019 aaKnown RBP10.9□□□□□ -0.66
TRAPPC3-206ENST00000469757 COL23A1Q86Y22 540 aaPredicted RBP10.9□□□□□ -0.66
TRAPPC3-206ENST00000469757 TEX13AQ9BXU3 409 aaPredicted RBP10.9□□□□□ -0.66
TRAPPC3-206ENST00000469757 SPON1Q9HCB6 807 aa10.9□□□□□ -0.66
TRAPPC3-206ENST00000469757 CCDC87Q9NVE4 849 aa10.9□□□□□ -0.66
TRAPPC3-206ENST00000469757 RRP7AQ9Y3A4 280 aaKnown RBP10.9□□□□□ -0.66
TRAPPC3-206ENST00000469757 KIF13BQ9NQT8 1826 aa10.9□□□□□ -0.66
TRAPPC3-206ENST00000469757 NRXN2Q9P2S2 1712 aa10.89□□□□□ -0.67
TRAPPC3-206ENST00000469757 APAF1O14727 1248 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms