RNA–Protein interactions for RNA: ENST00000469558.1

MCF2L-222, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 616 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-222ENST00000469558 U2AF1L5P0DN76 240 aaPredicted RBP15.64■□□□□ 0.09
MCF2L-222ENST00000469558 U2AF1Q01081 240 aaKnown RBP eCLIP15.64■□□□□ 0.09
MCF2L-222ENST00000469558 COL24A1Q17RW2 1714 aa15.64■□□□□ 0.09
MCF2L-222ENST00000469558 STK32BQ9NY57 414 aa15.64■□□□□ 0.09
MCF2L-222ENST00000469558 MAP3K5Q99683 1374 aa15.63■□□□□ 0.09
MCF2L-222ENST00000469558 TJP1Q07157 1748 aa15.63■□□□□ 0.09
MCF2L-222ENST00000469558 UBR2Q8IWV8 1755 aa15.63■□□□□ 0.09
MCF2L-222ENST00000469558 RNMTO43148 476 aaKnown RBP15.63■□□□□ 0.09
MCF2L-222ENST00000469558 ITPK1Q13572 414 aa15.63■□□□□ 0.09
MCF2L-222ENST00000469558 PLEKHF1Q96S99 279 aa15.63■□□□□ 0.09
MCF2L-222ENST00000469558 NUDCQ9Y266 331 aa15.63■□□□□ 0.09
MCF2L-222ENST00000469558 PNPLA7Q6ZV29 1317 aa15.63■□□□□ 0.09
MCF2L-222ENST00000469558 KCPQ6ZWJ8 1503 aa15.63■□□□□ 0.09
MCF2L-222ENST00000469558 LOC102724428A0A0B4J2F2 783 aa15.62■□□□□ 0.09
MCF2L-222ENST00000469558 FCHSD2O94868 740 aa15.62■□□□□ 0.09
MCF2L-222ENST00000469558 SIK1P57059 783 aa15.62■□□□□ 0.09
MCF2L-222ENST00000469558 AMIGO3Q86WK7 504 aa15.62■□□□□ 0.09
MCF2L-222ENST00000469558 NFATC2IPQ8NCF5 419 aa15.62■□□□□ 0.09
MCF2L-222ENST00000469558 SMARCC1Q92922 1105 aaPredicted RBP15.62■□□□□ 0.09
MCF2L-222ENST00000469558 UBR3Q6ZT12 1888 aa15.62■□□□□ 0.09
MCF2L-222ENST00000469558 CEMIPQ8WUJ3 1361 aa15.62■□□□□ 0.09
MCF2L-222ENST00000469558 IL17REQ8NFR9 667 aa15.61■□□□□ 0.09
MCF2L-222ENST00000469558 SLC52A2Q9HAB3 445 aa15.61■□□□□ 0.09
MCF2L-222ENST00000469558 DLG5Q8TDM6 1919 aa15.6■□□□□ 0.09
MCF2L-222ENST00000469558 CABP4P57796 275 aa15.6■□□□□ 0.09
MCF2L-222ENST00000469558 LINC00116Q8NCU8 138 aa15.6■□□□□ 0.09
MCF2L-222ENST00000469558 GAS2L2Q8NHY3 880 aa15.6■□□□□ 0.09
MCF2L-222ENST00000469558 GNAT3A8MTJ3 354 aa15.58■□□□□ 0.08
MCF2L-222ENST00000469558 PTGER2P43116 358 aa15.58■□□□□ 0.08
MCF2L-222ENST00000469558 SGIP1Q9BQI5 828 aa15.58■□□□□ 0.08
MCF2L-222ENST00000469558 MYH14Q7Z406 1995 aaKnown RBP15.57■□□□□ 0.08
MCF2L-222ENST00000469558 ZBTB7AO95365 584 aa15.57■□□□□ 0.08
MCF2L-222ENST00000469558 SMIM5Q71RC9 77 aa15.57■□□□□ 0.08
MCF2L-222ENST00000469558 SLC39A6Q13433 755 aa15.56■□□□□ 0.08
MCF2L-222ENST00000469558 ATP6V1AP38606 617 aa15.55■□□□□ 0.08
MCF2L-222ENST00000469558 COL23A1Q86Y22 540 aaPredicted RBP15.55■□□□□ 0.08
MCF2L-222ENST00000469558 PTCD1O75127 700 aaKnown RBP15.54■□□□□ 0.08
MCF2L-222ENST00000469558 CCDC184Q52MB2 194 aa15.54■□□□□ 0.08
MCF2L-222ENST00000469558 SPON1Q9HCB6 807 aa15.54■□□□□ 0.08
MCF2L-222ENST00000469558 TFCP2L1Q9NZI6 479 aa15.54■□□□□ 0.08
MCF2L-222ENST00000469558 DCTN1Q14203 1278 aa15.53■□□□□ 0.08
MCF2L-222ENST00000469558 MCM10Q7L590 875 aa15.53■□□□□ 0.08
MCF2L-222ENST00000469558 RBM42Q9BTD8 480 aaKnown RBP15.53■□□□□ 0.08
MCF2L-222ENST00000469558 MTFR1LQ9H019 292 aa15.53■□□□□ 0.08
MCF2L-222ENST00000469558 C4AP0C0L4 1744 aa15.53■□□□□ 0.08
MCF2L-222ENST00000469558 CNTNAP4Q9C0A0 1308 aa15.52■□□□□ 0.08
MCF2L-222ENST00000469558 NFE2L2Q16236 605 aa15.52■□□□□ 0.08
MCF2L-222ENST00000469558 ATF5Q9Y2D1 282 aaPredicted RBP15.52■□□□□ 0.08
MCF2L-222ENST00000469558 KCNQ3O43525 872 aa15.51■□□□□ 0.07
MCF2L-222ENST00000469558 KDM3BQ7LBC6 1761 aa15.51■□□□□ 0.07
MCF2L-222ENST00000469558 HTATSF1O43719 755 aaKnown RBP15.5■□□□□ 0.07
MCF2L-222ENST00000469558 AK7Q96M32 723 aa15.5■□□□□ 0.07
MCF2L-222ENST00000469558 ADAMTS8Q9UP79 889 aa15.5■□□□□ 0.07
MCF2L-222ENST00000469558 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.49■□□□□ 0.07
MCF2L-222ENST00000469558 GNPATO15228 680 aa15.49■□□□□ 0.07
MCF2L-222ENST00000469558 SSFA2P28290 1259 aa15.49■□□□□ 0.07
MCF2L-222ENST00000469558 TEFQ10587 303 aa15.49■□□□□ 0.07
MCF2L-222ENST00000469558 RC3H1Q5TC82 1133 aaKnown RBP15.49■□□□□ 0.07
MCF2L-222ENST00000469558 ZNF790Q6PG37 636 aa15.49■□□□□ 0.07
MCF2L-222ENST00000469558 DNAJC10Q8IXB1 793 aa15.49■□□□□ 0.07
MCF2L-222ENST00000469558 SLC16A10Q8TF71 515 aa15.49■□□□□ 0.07
MCF2L-222ENST00000469558 ZNF496Q96IT1 587 aaPredicted RBP15.49■□□□□ 0.07
MCF2L-222ENST00000469558 CRKLP46109 303 aaKnown RBP15.48■□□□□ 0.07
MCF2L-222ENST00000469558 INTS5Q6P9B9 1019 aaKnown RBP15.48■□□□□ 0.07
MCF2L-222ENST00000469558 THUMPD2Q9BTF0 503 aaKnown RBP15.48■□□□□ 0.07
MCF2L-222ENST00000469558 PHF14O94880 888 aa15.47■□□□□ 0.07
MCF2L-222ENST00000469558 CYP19A1P11511 503 aaPredicted RBP15.47■□□□□ 0.07
MCF2L-222ENST00000469558 CCDC146Q8IYE0 955 aa15.47■□□□□ 0.07
MCF2L-222ENST00000469558 VSIG10Q8N0Z9 540 aa15.47■□□□□ 0.07
MCF2L-222ENST00000469558 HEG1Q9ULI3 1381 aa15.47■□□□□ 0.07
MCF2L-222ENST00000469558 RPS6KA4O75676 772 aa15.46■□□□□ 0.07
MCF2L-222ENST00000469558 TMPOP42166 694 aaKnown RBP15.46■□□□□ 0.07
MCF2L-222ENST00000469558 MAPK8IP3Q9UPT6 1336 aa15.45■□□□□ 0.06
MCF2L-222ENST00000469558 BTBD11A6QL63 1104 aa15.45■□□□□ 0.06
MCF2L-222ENST00000469558 HMGB2P26583 209 aaKnown RBP15.45■□□□□ 0.06
MCF2L-222ENST00000469558 MSL1Q68DK7 614 aa15.45■□□□□ 0.06
MCF2L-222ENST00000469558 FLAD1Q8NFF5 587 aa15.45■□□□□ 0.06
MCF2L-222ENST00000469558 RTF1Q92541 710 aaKnown RBP15.45■□□□□ 0.06
MCF2L-222ENST00000469558 WDR43Q15061 677 aaKnown RBP eCLIP15.44■□□□□ 0.06
MCF2L-222ENST00000469558 ARHGEF1Q92888 912 aaKnown RBP15.44■□□□□ 0.06
MCF2L-222ENST00000469558 RUNDC1Q96C34 613 aa15.44■□□□□ 0.06
MCF2L-222ENST00000469558 PNNQ9H307 717 aaKnown RBP15.44■□□□□ 0.06
MCF2L-222ENST00000469558 RRP7AQ9Y3A4 280 aaKnown RBP15.44■□□□□ 0.06
MCF2L-222ENST00000469558 SOS1Q07889 1333 aaPredicted RBP15.43■□□□□ 0.06
MCF2L-222ENST00000469558 PRAMEF22A3QJZ6 481 aa15.43■□□□□ 0.06
MCF2L-222ENST00000469558 TTC5Q8N0Z6 440 aa15.43■□□□□ 0.06
MCF2L-222ENST00000469558 CCDC87Q9NVE4 849 aa15.43■□□□□ 0.06
MCF2L-222ENST00000469558 MIS18AQ9NYP9 233 aa15.43■□□□□ 0.06
MCF2L-222ENST00000469558 TRIM35Q9UPQ4 493 aa15.43■□□□□ 0.06
MCF2L-222ENST00000469558 ZBTB1Q9Y2K1 713 aa15.43■□□□□ 0.06
MCF2L-222ENST00000469558 RTCBQ9Y3I0 505 aaKnown RBP15.43■□□□□ 0.06
MCF2L-222ENST00000469558 LAMB4A4D0S4 1761 aa15.43■□□□□ 0.06
MCF2L-222ENST00000469558 MSH5O43196 834 aa15.42■□□□□ 0.06
MCF2L-222ENST00000469558 ADRA2BP18089 450 aa15.42■□□□□ 0.06
MCF2L-222ENST00000469558 RIPK4P57078 832 aa15.42■□□□□ 0.06
MCF2L-222ENST00000469558 TAF7Q15545 349 aaPredicted RBP15.42■□□□□ 0.06
MCF2L-222ENST00000469558 PNISRQ8TF01 805 aaKnown RBP15.42■□□□□ 0.06
MCF2L-222ENST00000469558 ARXQ96QS3 562 aa15.42■□□□□ 0.06
MCF2L-222ENST00000469558 FHDC1Q9C0D6 1143 aaPredicted RBP15.42■□□□□ 0.06
MCF2L-222ENST00000469558 ANP32CO43423 234 aa15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms