RNA–Protein interactions for RNA: ENST00000469334.5

SMARCE1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 2,128 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-207ENST00000469334 CASQ1P31415 396 aa10.76□□□□□ -0.69
SMARCE1-207ENST00000469334 TMPOP42166 694 aaKnown RBP10.76□□□□□ -0.69
SMARCE1-207ENST00000469334 MTHFSP49914 203 aa10.76□□□□□ -0.69
SMARCE1-207ENST00000469334 NEK4P51957 841 aa10.76□□□□□ -0.69
SMARCE1-207ENST00000469334 GPS2Q13227 327 aa10.76□□□□□ -0.69
SMARCE1-207ENST00000469334 ICE2Q659A1 982 aa10.76□□□□□ -0.69
SMARCE1-207ENST00000469334 ZSCAN25Q6NSZ9 544 aa10.76□□□□□ -0.69
SMARCE1-207ENST00000469334 SIRT2Q8IXJ6 389 aa10.76□□□□□ -0.69
SMARCE1-207ENST00000469334 GOLGA6L1Q8N7Z2 621 aa10.76□□□□□ -0.69
SMARCE1-207ENST00000469334 QRICH2Q9H0J4 1663 aa10.76□□□□□ -0.69
SMARCE1-207ENST00000469334 PLEKHD1A6NEE1 506 aa10.75□□□□□ -0.69
SMARCE1-207ENST00000469334 SMARCA5O60264 1052 aaPredicted RBP10.75□□□□□ -0.69
SMARCE1-207ENST00000469334 SLU7O95391 586 aaKnown RBP10.75□□□□□ -0.69
SMARCE1-207ENST00000469334 U2AF1L5P0DN76 240 aaPredicted RBP10.75□□□□□ -0.69
SMARCE1-207ENST00000469334 H2AFXP16104 143 aaPredicted RBP10.75□□□□□ -0.69
SMARCE1-207ENST00000469334 U2AF1Q01081 240 aaKnown RBP eCLIP10.75□□□□□ -0.69
SMARCE1-207ENST00000469334 CERS3Q8IU89 383 aa10.75□□□□□ -0.69
SMARCE1-207ENST00000469334 SLC26A8Q96RN1 970 aa10.75□□□□□ -0.69
SMARCE1-207ENST00000469334 NCAPGQ9BPX3 1015 aa10.75□□□□□ -0.69
SMARCE1-207ENST00000469334 ZNF215Q9UL58 517 aaPredicted RBP10.75□□□□□ -0.69
SMARCE1-207ENST00000469334 TRIM35Q9UPQ4 493 aa10.75□□□□□ -0.69
SMARCE1-207ENST00000469334 V9GYY5 206 aaPredicted RBP10.75□□□□□ -0.69
SMARCE1-207ENST00000469334 ELP1O95163 1332 aa10.75□□□□□ -0.69
SMARCE1-207ENST00000469334 PTPRCP08575 1304 aa10.75□□□□□ -0.69
SMARCE1-207ENST00000469334 SYCP2Q9BX26 1530 aa10.75□□□□□ -0.69
SMARCE1-207ENST00000469334 SOX12O15370 315 aa10.75□□□□□ -0.69
SMARCE1-207ENST00000469334 ATP8B1O43520 1251 aa10.75□□□□□ -0.69
SMARCE1-207ENST00000469334 SDSP20132 328 aa10.75□□□□□ -0.69
SMARCE1-207ENST00000469334 HNRNPMP52272 730 aaKnown RBP eCLIP10.75□□□□□ -0.69
SMARCE1-207ENST00000469334 NAA30Q147X3 362 aaPredicted RBP10.75□□□□□ -0.69
SMARCE1-207ENST00000469334 KCND1Q9NSA2 647 aa10.75□□□□□ -0.69
SMARCE1-207ENST00000469334 HDAC5Q9UQL6 1122 aa10.75□□□□□ -0.69
SMARCE1-207ENST00000469334 COL3A1P02461 1466 aaPredicted RBP10.74□□□□□ -0.69
SMARCE1-207ENST00000469334 EPB41L2O43491 1005 aaKnown RBP10.74□□□□□ -0.69
SMARCE1-207ENST00000469334 CCDC186Q7Z3E2 898 aa10.74□□□□□ -0.69
SMARCE1-207ENST00000469334 PLEKHF1Q96S99 279 aa10.74□□□□□ -0.69
SMARCE1-207ENST00000469334 SRCIN1Q9C0H9 1055 aa10.74□□□□□ -0.69
SMARCE1-207ENST00000469334 SPAG9O60271 1321 aaKnown RBP10.74□□□□□ -0.69
SMARCE1-207ENST00000469334 U2SURPO15042 1029 aaKnown RBP10.73□□□□□ -0.69
SMARCE1-207ENST00000469334 ELF2Q15723 593 aa10.73□□□□□ -0.69
SMARCE1-207ENST00000469334 NYAP1Q6ZVC0 841 aa10.73□□□□□ -0.69
SMARCE1-207ENST00000469334 PLA2G4DQ86XP0 818 aa10.73□□□□□ -0.69
SMARCE1-207ENST00000469334 GDPD2Q9HCC8 539 aa10.73□□□□□ -0.69
SMARCE1-207ENST00000469334 TET3O43151 1660 aa10.73□□□□□ -0.69
SMARCE1-207ENST00000469334 CDC42BPGQ6DT37 1551 aa10.73□□□□□ -0.69
SMARCE1-207ENST00000469334 PTPN14Q15678 1187 aa10.73□□□□□ -0.69
SMARCE1-207ENST00000469334 NOM1Q5C9Z4 860 aaKnown RBP10.73□□□□□ -0.69
SMARCE1-207ENST00000469334 ARGLU1Q9NWB6 273 aaPredicted RBP10.73□□□□□ -0.69
SMARCE1-207ENST00000469334 ZNF446Q9NWS9 450 aa10.73□□□□□ -0.69
SMARCE1-207ENST00000469334 FHOD1Q9Y613 1164 aa10.73□□□□□ -0.69
SMARCE1-207ENST00000469334 FANCAO15360 1455 aa10.73□□□□□ -0.69
SMARCE1-207ENST00000469334 MYO1CO00159 1063 aa10.72□□□□□ -0.69
SMARCE1-207ENST00000469334 TUBB4AP04350 444 aa10.72□□□□□ -0.69
SMARCE1-207ENST00000469334 ZSCAN22P10073 491 aaPredicted RBP10.72□□□□□ -0.69
SMARCE1-207ENST00000469334 GUCY2CP25092 1073 aa10.72□□□□□ -0.69
SMARCE1-207ENST00000469334 ZNF75DP51815 510 aa10.72□□□□□ -0.69
SMARCE1-207ENST00000469334 POLKQ9UBT6 870 aa10.72□□□□□ -0.69
SMARCE1-207ENST00000469334 ASXL2Q76L83 1435 aa10.72□□□□□ -0.69
SMARCE1-207ENST00000469334 KIF1BO60333 1816 aa10.72□□□□□ -0.69
SMARCE1-207ENST00000469334 PNMA6AP0CW24 399 aaPredicted RBP10.72□□□□□ -0.69
SMARCE1-207ENST00000469334 GIMAP6Q6P9H5 292 aa10.72□□□□□ -0.69
SMARCE1-207ENST00000469334 DRC7Q8IY82 874 aa10.72□□□□□ -0.69
SMARCE1-207ENST00000469334 MRPL50Q8N5N7 158 aaKnown RBP10.72□□□□□ -0.69
SMARCE1-207ENST00000469334 IQUBQ8NA54 791 aa10.72□□□□□ -0.69
SMARCE1-207ENST00000469334 TRERF1Q96PN7 1200 aa10.72□□□□□ -0.69
SMARCE1-207ENST00000469334 BCCIPQ9P287 314 aaKnown RBP eCLIP10.72□□□□□ -0.69
SMARCE1-207ENST00000469334 CNPY2Q9Y2B0 182 aa10.72□□□□□ -0.69
SMARCE1-207ENST00000469334 ERBB3P21860 1342 aa10.72□□□□□ -0.69
SMARCE1-207ENST00000469334 CAVIN2O95810 425 aa10.71□□□□□ -0.69
SMARCE1-207ENST00000469334 CARMIL2Q6F5E8 1435 aa10.71□□□□□ -0.69
SMARCE1-207ENST00000469334 SYT10Q6XYQ8 523 aa10.71□□□□□ -0.69
SMARCE1-207ENST00000469334 FILIP1Q7Z7B0 1213 aa10.71□□□□□ -0.69
SMARCE1-207ENST00000469334 TDRD7Q8NHU6 1098 aaKnown RBP10.71□□□□□ -0.69
SMARCE1-207ENST00000469334 RTF1Q92541 710 aaKnown RBP10.71□□□□□ -0.69
SMARCE1-207ENST00000469334 API5Q9BZZ5 524 aaKnown RBP10.71□□□□□ -0.69
SMARCE1-207ENST00000469334 C1orf115Q9H7X2 142 aa10.71□□□□□ -0.69
SMARCE1-207ENST00000469334 ST7Q9NRC1 585 aa10.71□□□□□ -0.69
SMARCE1-207ENST00000469334 PSD3Q9NYI0 1048 aa10.71□□□□□ -0.69
SMARCE1-207ENST00000469334 ATP10BO94823 1461 aa10.7□□□□□ -0.7
SMARCE1-207ENST00000469334 AATKQ6ZMQ8 1374 aa10.7□□□□□ -0.7
SMARCE1-207ENST00000469334 A0A1B0GUL7 405 aa10.7□□□□□ -0.7
SMARCE1-207ENST00000469334 LRMPQ12912 555 aa10.7□□□□□ -0.7
SMARCE1-207ENST00000469334 KRBA2Q6ZNG9 492 aa10.7□□□□□ -0.7
SMARCE1-207ENST00000469334 GOLGA5Q8TBA6 731 aa10.7□□□□□ -0.7
SMARCE1-207ENST00000469334 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.7□□□□□ -0.72e-15■■■□□ 14.6
SMARCE1-207ENST00000469334 OSBPL3Q9H4L5 887 aa10.7□□□□□ -0.7
SMARCE1-207ENST00000469334 L2HGDHQ9H9P8 463 aa10.7□□□□□ -0.7
SMARCE1-207ENST00000469334 DEPDC5O75140 1603 aa10.7□□□□□ -0.7
SMARCE1-207ENST00000469334 GLI2P10070 1586 aa10.7□□□□□ -0.7
SMARCE1-207ENST00000469334 APPP05067 770 aa10.7□□□□□ -0.7
SMARCE1-207ENST00000469334 PLA2G4AP47712 749 aa10.7□□□□□ -0.7
SMARCE1-207ENST00000469334 MAP3K11Q16584 847 aa10.7□□□□□ -0.7
SMARCE1-207ENST00000469334 RPAP2Q8IXW5 612 aaPredicted RBP10.7□□□□□ -0.7
SMARCE1-207ENST00000469334 AK7Q96M32 723 aa10.7□□□□□ -0.7
SMARCE1-207ENST00000469334 ATG3Q9NT62 314 aa10.7□□□□□ -0.7
SMARCE1-207ENST00000469334 LRRFIP2Q9Y608 721 aaKnown RBP10.7□□□□□ -0.7
SMARCE1-207ENST00000469334 ARHGEF40Q8TER5 1519 aa10.7□□□□□ -0.7
SMARCE1-207ENST00000469334 NRXN1Q9ULB1 1477 aa10.69□□□□□ -0.7
SMARCE1-207ENST00000469334 ATP10DQ9P241 1426 aa10.69□□□□□ -0.7
SMARCE1-207ENST00000469334 F13A1P00488 732 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms