RNA–Protein interactions for RNA: ENST00000468876.1

ARHGEF39-202, Transcript of Rho guanine nucleotide exchange factor 39, humanhuman

TSL 2

Gene ARHGEF39, Length 739 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39-202ENST00000468876 GLTPD2A6NH11 291 aa16.44■□□□□ 0.22
ARHGEF39-202ENST00000468876 TAF1LQ8IZX4 1826 aa16.44■□□□□ 0.22
ARHGEF39-202ENST00000468876 HSPA8P11142 646 aaKnown RBP16.43■□□□□ 0.22
ARHGEF39-202ENST00000468876 SMARCC1Q92922 1105 aaPredicted RBP16.43■□□□□ 0.22
ARHGEF39-202ENST00000468876 WBP1LQ9NX94 342 aa16.43■□□□□ 0.22
ARHGEF39-202ENST00000468876 HDGFL2Q7Z4V5 671 aaPredicted RBP16.42■□□□□ 0.22
ARHGEF39-202ENST00000468876 KIF13BQ9NQT8 1826 aa16.42■□□□□ 0.22
ARHGEF39-202ENST00000468876 ZC3H4Q9UPT8 1303 aaKnown RBP16.42■□□□□ 0.22
ARHGEF39-202ENST00000468876 UBR3Q6ZT12 1888 aa16.42■□□□□ 0.22
ARHGEF39-202ENST00000468876 KCNA3P22001 575 aa16.41■□□□□ 0.22
ARHGEF39-202ENST00000468876 VEGFBP49765 207 aa16.41■□□□□ 0.22
ARHGEF39-202ENST00000468876 TMF1P82094 1093 aa16.41■□□□□ 0.22
ARHGEF39-202ENST00000468876 PARP3Q9Y6F1 533 aa16.41■□□□□ 0.22
ARHGEF39-202ENST00000468876 RASSF7Q02833 373 aa16.4■□□□□ 0.22
ARHGEF39-202ENST00000468876 NLGN1Q8N2Q7 840 aa16.4■□□□□ 0.22
ARHGEF39-202ENST00000468876 LINC00116Q8NCU8 138 aa16.4■□□□□ 0.22
ARHGEF39-202ENST00000468876 CHADLQ6NUI6 762 aa16.39■□□□□ 0.21
ARHGEF39-202ENST00000468876 ARFGEF1Q9Y6D6 1849 aa16.38■□□□□ 0.21
ARHGEF39-202ENST00000468876 IP6K1Q92551 441 aa16.38■□□□□ 0.21
ARHGEF39-202ENST00000468876 TERF2IPQ9NYB0 399 aa16.38■□□□□ 0.21
ARHGEF39-202ENST00000468876 MEGF6O75095 1541 aa16.38■□□□□ 0.21
ARHGEF39-202ENST00000468876 FAM208AQ9UK61 1670 aaKnown RBP16.37■□□□□ 0.21
ARHGEF39-202ENST00000468876 LMNB1P20700 586 aa16.37■□□□□ 0.21
ARHGEF39-202ENST00000468876 PUS7Q96PZ0 661 aaKnown RBP16.37■□□□□ 0.21
ARHGEF39-202ENST00000468876 BRCA1P38398 1863 aaKnown RBP16.35■□□□□ 0.21
ARHGEF39-202ENST00000468876 LOC102724428A0A0B4J2F2 783 aa16.35■□□□□ 0.21
ARHGEF39-202ENST00000468876 FBLN1P23142 703 aa16.35■□□□□ 0.21
ARHGEF39-202ENST00000468876 SIK1P57059 783 aa16.35■□□□□ 0.21
ARHGEF39-202ENST00000468876 TRAPPC3LQ5T215 181 aa16.35■□□□□ 0.21
ARHGEF39-202ENST00000468876 DPY19L2Q6NUT2 758 aa16.35■□□□□ 0.21
ARHGEF39-202ENST00000468876 KIF20BQ96Q89 1820 aa16.35■□□□□ 0.21
ARHGEF39-202ENST00000468876 CHRNA5P30532 468 aa16.34■□□□□ 0.21
ARHGEF39-202ENST00000468876 RAPGEF4Q8WZA2 1011 aa16.34■□□□□ 0.21
ARHGEF39-202ENST00000468876 RGPD2P0DJD1 1756 aa16.33■□□□□ 0.21
ARHGEF39-202ENST00000468876 POTECB2RU33 542 aa16.33■□□□□ 0.2
ARHGEF39-202ENST00000468876 MAP2K1Q02750 393 aaPredicted RBP16.33■□□□□ 0.2
ARHGEF39-202ENST00000468876 RTCBQ9Y3I0 505 aaKnown RBP16.33■□□□□ 0.2
ARHGEF39-202ENST00000468876 MAP3K19Q56UN5 1328 aa16.33■□□□□ 0.2
ARHGEF39-202ENST00000468876 C4AP0C0L4 1744 aa16.33■□□□□ 0.2
ARHGEF39-202ENST00000468876 SBF1O95248 1867 aa16.32■□□□□ 0.2
ARHGEF39-202ENST00000468876 ATP6V1AP38606 617 aa16.32■□□□□ 0.2
ARHGEF39-202ENST00000468876 PCDH11XQ9BZA7 1347 aa16.32■□□□□ 0.2
ARHGEF39-202ENST00000468876 PCDH11YQ9BZA8 1340 aa16.32■□□□□ 0.2
ARHGEF39-202ENST00000468876 CGNL1Q0VF96 1302 aa16.31■□□□□ 0.2
ARHGEF39-202ENST00000468876 TMEM88BA6NKF7 163 aa16.31■□□□□ 0.2
ARHGEF39-202ENST00000468876 POTEIP0CG38 1075 aa16.31■□□□□ 0.2
ARHGEF39-202ENST00000468876 POTEJP0CG39 1038 aa16.31■□□□□ 0.2
ARHGEF39-202ENST00000468876 TATP17735 454 aaPredicted RBP16.31■□□□□ 0.2
ARHGEF39-202ENST00000468876 ITPK1Q13572 414 aa16.31■□□□□ 0.2
ARHGEF39-202ENST00000468876 USHBP1Q8N6Y0 703 aa16.31■□□□□ 0.2
ARHGEF39-202ENST00000468876 PIGBQ92521 554 aa16.31■□□□□ 0.2
ARHGEF39-202ENST00000468876 GYS1P13807 737 aa16.3■□□□□ 0.2
ARHGEF39-202ENST00000468876 RFC4P35249 363 aa16.3■□□□□ 0.2
ARHGEF39-202ENST00000468876 AMPHP49418 695 aa16.3■□□□□ 0.2
ARHGEF39-202ENST00000468876 COG3Q96JB2 828 aa16.3■□□□□ 0.2
ARHGEF39-202ENST00000468876 BEGAINQ9BUH8 593 aa16.3■□□□□ 0.2
ARHGEF39-202ENST00000468876 PCGF6Q9BYE7 350 aa16.3■□□□□ 0.2
ARHGEF39-202ENST00000468876 KDM6AO15550 1401 aaPredicted RBP16.29■□□□□ 0.2
ARHGEF39-202ENST00000468876 GGNBP2Q9H3C7 697 aa16.29■□□□□ 0.2
ARHGEF39-202ENST00000468876 HOXC9P31274 260 aa16.28■□□□□ 0.2
ARHGEF39-202ENST00000468876 ARHGEF1Q92888 912 aaKnown RBP16.28■□□□□ 0.2
ARHGEF39-202ENST00000468876 RTL1A6NKG5 1358 aa16.27■□□□□ 0.2
ARHGEF39-202ENST00000468876 RRS1Q15050 365 aaKnown RBP16.27■□□□□ 0.2
ARHGEF39-202ENST00000468876 DEFB115Q30KQ5 88 aa16.27■□□□□ 0.2
ARHGEF39-202ENST00000468876 MCOLN1Q9GZU1 580 aa16.27■□□□□ 0.2
ARHGEF39-202ENST00000468876 PASKQ96RG2 1323 aa16.26■□□□□ 0.19
ARHGEF39-202ENST00000468876 WDR33Q9C0J8 1336 aaKnown RBP16.26■□□□□ 0.19
ARHGEF39-202ENST00000468876 FYB1O15117 783 aa16.26■□□□□ 0.19
ARHGEF39-202ENST00000468876 NBPF6Q5VWK0 638 aa16.26■□□□□ 0.19
ARHGEF39-202ENST00000468876 NBPF4Q96M43 638 aa16.26■□□□□ 0.19
ARHGEF39-202ENST00000468876 PRPF38BQ5VTL8 546 aaKnown RBP16.25■□□□□ 0.19
ARHGEF39-202ENST00000468876 PDE4DIPQ5VU43 2346 aa16.25■□□□□ 0.19
ARHGEF39-202ENST00000468876 TIAM2Q8IVF5 1701 aa16.25■□□□□ 0.19
ARHGEF39-202ENST00000468876 ANKRD26Q9UPS8 1709 aa16.25■□□□□ 0.19
ARHGEF39-202ENST00000468876 VIRMAQ69YN4 1812 aaKnown RBP16.24■□□□□ 0.19
ARHGEF39-202ENST00000468876 CYP27B1O15528 508 aa16.24■□□□□ 0.19
ARHGEF39-202ENST00000468876 ADRA2BP18089 450 aa16.24■□□□□ 0.19
ARHGEF39-202ENST00000468876 CARD14Q9BXL6 1004 aa16.24■□□□□ 0.19
ARHGEF39-202ENST00000468876 TMOD3Q9NYL9 352 aa16.24■□□□□ 0.19
ARHGEF39-202ENST00000468876 TSKSQ9UJT2 592 aa16.24■□□□□ 0.19
ARHGEF39-202ENST00000468876 ASAP1Q9ULH1 1129 aa16.24■□□□□ 0.19
ARHGEF39-202ENST00000468876 CLSPNQ9HAW4 1339 aa16.23■□□□□ 0.19
ARHGEF39-202ENST00000468876 RASSF10A6NK89 507 aa16.23■□□□□ 0.19
ARHGEF39-202ENST00000468876 PAXIP1Q6ZW49 1069 aaPredicted RBP16.23■□□□□ 0.19
ARHGEF39-202ENST00000468876 LDHDQ86WU2 507 aa16.23■□□□□ 0.19
ARHGEF39-202ENST00000468876 ABT1Q9ULW3 272 aaKnown RBP16.23■□□□□ 0.19
ARHGEF39-202ENST00000468876 GRM1Q13255 1194 aa16.22■□□□□ 0.19
ARHGEF39-202ENST00000468876 ERFEQ4G0M1 354 aa16.22■□□□□ 0.19
ARHGEF39-202ENST00000468876 SLC24A1O60721 1099 aa16.21■□□□□ 0.19
ARHGEF39-202ENST00000468876 DDR1Q08345 913 aa16.21■□□□□ 0.19
ARHGEF39-202ENST00000468876 CLEC11AQ9Y240 323 aa16.21■□□□□ 0.19
ARHGEF39-202ENST00000468876 MAP2P11137 1827 aaKnown RBP16.21■□□□□ 0.19
ARHGEF39-202ENST00000468876 ITGB4P16144 1822 aa16.21■□□□□ 0.19
ARHGEF39-202ENST00000468876 NFKBIEO00221 500 aa16.2■□□□□ 0.18
ARHGEF39-202ENST00000468876 DDNO94850 711 aaPredicted RBP16.2■□□□□ 0.18
ARHGEF39-202ENST00000468876 DGKZQ13574 1117 aa16.2■□□□□ 0.18
ARHGEF39-202ENST00000468876 EAPPQ56P03 285 aaPredicted RBP16.2■□□□□ 0.18
ARHGEF39-202ENST00000468876 ZNF219Q9P2Y4 722 aaPredicted RBP16.2■□□□□ 0.18
ARHGEF39-202ENST00000468876 FLT4P35916 1363 aa16.19■□□□□ 0.18
ARHGEF39-202ENST00000468876 FKBP8Q14318 412 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms