RNA–Protein interactions for RNA: ENST00000468753.5

COL4A3-203, Transcript of collagen type IV alpha 3 chain, humanhuman

TSL 5

Gene COL4A3, Length 660 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3-203ENST00000468753 DOT1LQ8TEK3 1739 aa11.64□□□□□ -0.55
COL4A3-203ENST00000468753 CYP27B1O15528 508 aa11.63□□□□□ -0.55
COL4A3-203ENST00000468753 R3HDM1Q15032 1099 aaKnown RBP11.63□□□□□ -0.55
COL4A3-203ENST00000468753 RASEFQ8IZ41 740 aa11.63□□□□□ -0.55
COL4A3-203ENST00000468753 PCDH11XQ9BZA7 1347 aa11.62□□□□□ -0.55
COL4A3-203ENST00000468753 PCDH11YQ9BZA8 1340 aa11.62□□□□□ -0.55
COL4A3-203ENST00000468753 TXNRD1Q16881 649 aa11.62□□□□□ -0.55
COL4A3-203ENST00000468753 CC2D1BQ5T0F9 858 aaKnown RBP11.62□□□□□ -0.55
COL4A3-203ENST00000468753 PLEKHG2Q9H7P9 1386 aa11.62□□□□□ -0.55
COL4A3-203ENST00000468753 KAT6BQ8WYB5 2073 aa11.61□□□□□ -0.55
COL4A3-203ENST00000468753 LRP5O75197 1615 aa11.61□□□□□ -0.55
COL4A3-203ENST00000468753 IL13P35225 146 aa11.61□□□□□ -0.55
COL4A3-203ENST00000468753 PRIM1P49642 420 aaKnown RBP11.61□□□□□ -0.55
COL4A3-203ENST00000468753 NBPF14Q5TI25 921 aa11.61□□□□□ -0.55
COL4A3-203ENST00000468753 FAM163AQ96GL9 167 aaPredicted RBP11.61□□□□□ -0.55
COL4A3-203ENST00000468753 ANO8Q9HCE9 1232 aaPredicted RBP11.61□□□□□ -0.55
COL4A3-203ENST00000468753 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.61□□□□□ -0.55
COL4A3-203ENST00000468753 PAPPAQ13219 1627 aa11.6□□□□□ -0.55
COL4A3-203ENST00000468753 MTHFSP49914 203 aa11.6□□□□□ -0.55
COL4A3-203ENST00000468753 NKX1-1Q15270 411 aaPredicted RBP11.6□□□□□ -0.55
COL4A3-203ENST00000468753 TOGARAM1Q9Y4F4 1720 aa11.6□□□□□ -0.55
COL4A3-203ENST00000468753 KDRP35968 1356 aa11.59□□□□□ -0.55
COL4A3-203ENST00000468753 SCUBE2Q9NQ36 999 aa11.59□□□□□ -0.55
COL4A3-203ENST00000468753 SPG7Q9UQ90 795 aa11.59□□□□□ -0.55
COL4A3-203ENST00000468753 AEBP1Q8IUX7 1158 aa11.58□□□□□ -0.56
COL4A3-203ENST00000468753 LRRC4BQ9NT99 713 aa11.58□□□□□ -0.56
COL4A3-203ENST00000468753 TRPC6Q9Y210 931 aa11.58□□□□□ -0.56
COL4A3-203ENST00000468753 LY75O60449 1722 aa11.57□□□□□ -0.56
COL4A3-203ENST00000468753 COL3A1P02461 1466 aaPredicted RBP11.57□□□□□ -0.56
COL4A3-203ENST00000468753 PHKG2P15735 406 aa11.57□□□□□ -0.56
COL4A3-203ENST00000468753 PLCD3Q8N3E9 789 aa11.57□□□□□ -0.56
COL4A3-203ENST00000468753 SYTL4Q96C24 671 aaPredicted RBP11.57□□□□□ -0.56
COL4A3-203ENST00000468753 CASZ1Q86V15 1759 aa11.56□□□□□ -0.56
COL4A3-203ENST00000468753 ITGB4P16144 1822 aa11.56□□□□□ -0.56
COL4A3-203ENST00000468753 SLC15A2Q16348 729 aa11.56□□□□□ -0.56
COL4A3-203ENST00000468753 SLC27A3Q5K4L6 730 aa11.56□□□□□ -0.56
COL4A3-203ENST00000468753 SULT6B1Q6IMI4 303 aa11.56□□□□□ -0.56
COL4A3-203ENST00000468753 IFNL2Q8IZJ0 200 aa11.56□□□□□ -0.56
COL4A3-203ENST00000468753 CNGB1Q14028 1251 aaPredicted RBP11.55□□□□□ -0.56
COL4A3-203ENST00000468753 KIF12Q96FN5 646 aa11.55□□□□□ -0.56
COL4A3-203ENST00000468753 STK32BQ9NY57 414 aa11.55□□□□□ -0.56
COL4A3-203ENST00000468753 DIAPH1O60610 1272 aaKnown RBP11.54□□□□□ -0.56
COL4A3-203ENST00000468753 AMOTQ4VCS5 1084 aa11.54□□□□□ -0.56
COL4A3-203ENST00000468753 PLEKHO1Q53GL0 409 aaPredicted RBP11.54□□□□□ -0.56
COL4A3-203ENST00000468753 PIGBQ92521 554 aa11.54□□□□□ -0.56
COL4A3-203ENST00000468753 PDGFDQ9GZP0 370 aaPredicted RBP11.54□□□□□ -0.56
COL4A3-203ENST00000468753 SRCAPQ6ZRS2 3230 aa11.54□□□□□ -0.56
COL4A3-203ENST00000468753 ZNF827Q17R98 1081 aa11.53□□□□□ -0.56
COL4A3-203ENST00000468753 ZNF530Q6P9A1 599 aaPredicted RBP11.53□□□□□ -0.56
COL4A3-203ENST00000468753 MPRIPQ6WCQ1 1025 aa11.53□□□□□ -0.56
COL4A3-203ENST00000468753 KDM6AO15550 1401 aaPredicted RBP11.52□□□□□ -0.56
COL4A3-203ENST00000468753 MAP3K13O43283 966 aa11.52□□□□□ -0.57
COL4A3-203ENST00000468753 PPP2R1AP30153 589 aa11.52□□□□□ -0.57
COL4A3-203ENST00000468753 NUBP1P53384 320 aa11.52□□□□□ -0.57
COL4A3-203ENST00000468753 KCNQ4P56696 695 aa11.52□□□□□ -0.57
COL4A3-203ENST00000468753 PALLDQ8WX93 1383 aa11.52□□□□□ -0.57
COL4A3-203ENST00000468753 QSER1Q2KHR3 1735 aa11.52□□□□□ -0.57
COL4A3-203ENST00000468753 HMOX1P09601 288 aa11.51□□□□□ -0.57
COL4A3-203ENST00000468753 ATN1P54259 1190 aaPredicted RBP11.51□□□□□ -0.57
COL4A3-203ENST00000468753 DCAF5Q96JK2 942 aa11.51□□□□□ -0.57
COL4A3-203ENST00000468753 CCNL1Q9UK58 526 aaPredicted RBP11.51□□□□□ -0.57
COL4A3-203ENST00000468753 ERVV-2B6SEH9 535 aa11.5□□□□□ -0.57
COL4A3-203ENST00000468753 HSP90AB1P08238 724 aaKnown RBP11.5□□□□□ -0.57
COL4A3-203ENST00000468753 SMARCC1Q92922 1105 aaPredicted RBP11.5□□□□□ -0.57
COL4A3-203ENST00000468753 SPON1Q9HCB6 807 aa11.5□□□□□ -0.57
COL4A3-203ENST00000468753 TMOD3Q9NYL9 352 aa11.5□□□□□ -0.57
COL4A3-203ENST00000468753 TUBGCP6Q96RT7 1819 aa11.5□□□□□ -0.57
COL4A3-203ENST00000468753 TAF1LQ8IZX4 1826 aa11.49□□□□□ -0.57
COL4A3-203ENST00000468753 POTEFA5A3E0 1075 aa11.49□□□□□ -0.57
COL4A3-203ENST00000468753 ASAP1Q9ULH1 1129 aa11.49□□□□□ -0.57
COL4A3-203ENST00000468753 PNPLA7Q6ZV29 1317 aa11.49□□□□□ -0.57
COL4A3-203ENST00000468753 C5P01031 1676 aa11.49□□□□□ -0.57
COL4A3-203ENST00000468753 AKAP4Q5JQC9 854 aa11.48□□□□□ -0.57
COL4A3-203ENST00000468753 C1orf141Q5JVX7 400 aa11.48□□□□□ -0.57
COL4A3-203ENST00000468753 CFAP53Q96M91 514 aa11.48□□□□□ -0.57
COL4A3-203ENST00000468753 ATG3Q9NT62 314 aa11.48□□□□□ -0.57
COL4A3-203ENST00000468753 ADAMTS7Q9UKP4 1686 aa11.48□□□□□ -0.57
COL4A3-203ENST00000468753 SCN11AQ9UI33 1791 aa11.47□□□□□ -0.57
COL4A3-203ENST00000468753 LOC102724428A0A0B4J2F2 783 aa11.47□□□□□ -0.57
COL4A3-203ENST00000468753 U2SURPO15042 1029 aaKnown RBP11.47□□□□□ -0.57
COL4A3-203ENST00000468753 ZBTB7AO95365 584 aa11.47□□□□□ -0.57
COL4A3-203ENST00000468753 PTGER2P43116 358 aa11.47□□□□□ -0.57
COL4A3-203ENST00000468753 SIK1P57059 783 aa11.47□□□□□ -0.57
COL4A3-203ENST00000468753 MTHFSDQ2M296 383 aaKnown RBP11.47□□□□□ -0.57
COL4A3-203ENST00000468753 SGIP1Q9BQI5 828 aa11.47□□□□□ -0.57
COL4A3-203ENST00000468753 MRC1P22897 1456 aa11.46□□□□□ -0.57
COL4A3-203ENST00000468753 ZEB1P37275 1124 aaPredicted RBP11.46□□□□□ -0.57
COL4A3-203ENST00000468753 DDX10Q13206 875 aaKnown RBP11.46□□□□□ -0.57
COL4A3-203ENST00000468753 CDAN1Q8IWY9 1227 aa11.46□□□□□ -0.57
COL4A3-203ENST00000468753 MTFR1LQ9H019 292 aa11.46□□□□□ -0.57
COL4A3-203ENST00000468753 C4BP0C0L5 1744 aa11.46□□□□□ -0.58
COL4A3-203ENST00000468753 COL24A1Q17RW2 1714 aa11.46□□□□□ -0.58
COL4A3-203ENST00000468753 ZNF831Q5JPB2 1677 aa11.46□□□□□ -0.58
COL4A3-203ENST00000468753 CABP4P57796 275 aa11.45□□□□□ -0.58
COL4A3-203ENST00000468753 ITPK1Q13572 414 aa11.45□□□□□ -0.58
COL4A3-203ENST00000468753 SLC16A10Q8TF71 515 aa11.45□□□□□ -0.58
COL4A3-203ENST00000468753 SLC4A9Q96Q91 983 aa11.45□□□□□ -0.58
COL4A3-203ENST00000468753 RSPH6AQ9H0K4 717 aa11.45□□□□□ -0.58
COL4A3-203ENST00000468753 LGR6Q9HBX8 967 aa11.45□□□□□ -0.58
COL4A3-203ENST00000468753 TFCP2L1Q9NZI6 479 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms