RNA–Protein interactions for RNA: ENST00000468528.5

NXF3-204, Transcript of nuclear RNA export factor 3, humanhuman

TSL 5

Gene NXF3, Length 535 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF3-204ENST00000468528 SLFN5Q08AF3 891 aa9.3□□□□□ -0.92
NXF3-204ENST00000468528 KRT27Q7Z3Y8 459 aa9.3□□□□□ -0.92
NXF3-204ENST00000468528 TRMT2AQ8IZ69 625 aaKnown RBP9.3□□□□□ -0.92
NXF3-204ENST00000468528 KDM6AO15550 1401 aaPredicted RBP9.3□□□□□ -0.92
NXF3-204ENST00000468528 CENPBP07199 599 aaPredicted RBP9.29□□□□□ -0.92
NXF3-204ENST00000468528 DCTN1Q14203 1278 aa9.29□□□□□ -0.92
NXF3-204ENST00000468528 POTEAQ6S8J7 498 aa9.29□□□□□ -0.92
NXF3-204ENST00000468528 ZNF428Q96B54 188 aa9.29□□□□□ -0.92
NXF3-204ENST00000468528 LGR6Q9HBX8 967 aa9.29□□□□□ -0.92
NXF3-204ENST00000468528 TMOD3Q9NYL9 352 aa9.29□□□□□ -0.92
NXF3-204ENST00000468528 BTBD11A6QL63 1104 aa9.28□□□□□ -0.92
NXF3-204ENST00000468528 TTC5Q8N0Z6 440 aa9.28□□□□□ -0.92
NXF3-204ENST00000468528 NFATC2IPQ8NCF5 419 aa9.28□□□□□ -0.92
NXF3-204ENST00000468528 TSPYL4Q9UJ04 414 aa9.28□□□□□ -0.92
NXF3-204ENST00000468528 DLG5Q8TDM6 1919 aa9.28□□□□□ -0.92
NXF3-204ENST00000468528 SHANK3Q9BYB0 1731 aa9.28□□□□□ -0.92
NXF3-204ENST00000468528 HOXB7P09629 217 aa9.27□□□□□ -0.93
NXF3-204ENST00000468528 DUSP27Q5VZP5 1158 aa9.27□□□□□ -0.93
NXF3-204ENST00000468528 ZNF790Q6PG37 636 aa9.27□□□□□ -0.93
NXF3-204ENST00000468528 SMARCC1Q92922 1105 aaPredicted RBP9.27□□□□□ -0.93
NXF3-204ENST00000468528 THUMPD2Q9BTF0 503 aaKnown RBP9.27□□□□□ -0.93
NXF3-204ENST00000468528 FANCIQ9NVI1 1328 aa9.27□□□□□ -0.93
NXF3-204ENST00000468528 SCN11AQ9UI33 1791 aa9.27□□□□□ -0.93
NXF3-204ENST00000468528 RGS12O14924 1447 aa9.26□□□□□ -0.93
NXF3-204ENST00000468528 PRIM1P49642 420 aaKnown RBP9.26□□□□□ -0.93
NXF3-204ENST00000468528 SYTL4Q96C24 671 aaPredicted RBP9.26□□□□□ -0.93
NXF3-204ENST00000468528 BCL11BQ9C0K0 894 aaPredicted RBP9.26□□□□□ -0.93
NXF3-204ENST00000468528 MBIPQ9NS73 344 aa9.26□□□□□ -0.93
NXF3-204ENST00000468528 LAS1LQ9Y4W2 734 aaKnown RBP9.26□□□□□ -0.93
NXF3-204ENST00000468528 VSIG10Q8N0Z9 540 aa9.25□□□□□ -0.93
NXF3-204ENST00000468528 PIGBQ92521 554 aa9.25□□□□□ -0.93
NXF3-204ENST00000468528 CDCA7LQ96GN5 454 aa9.25□□□□□ -0.93
NXF3-204ENST00000468528 FMNL2Q96PY5 1086 aa9.25□□□□□ -0.93
NXF3-204ENST00000468528 TEX13AQ9BXU3 409 aaPredicted RBP9.25□□□□□ -0.93
NXF3-204ENST00000468528 SENP3-EIF4A1A0A087X0R7 540 aa9.24□□□□□ -0.93
NXF3-204ENST00000468528 SPINK5Q9NQ38 1064 aaPredicted RBP9.24□□□□□ -0.93
NXF3-204ENST00000468528 RNF216Q9NWF9 866 aaPredicted RBP9.24□□□□□ -0.93
NXF3-204ENST00000468528 HEG1Q9ULI3 1381 aa9.24□□□□□ -0.93
NXF3-204ENST00000468528 SNRPA1P09661 255 aaKnown RBP9.23□□□□□ -0.93
NXF3-204ENST00000468528 ATXN8OSP0DMR3 200 aa9.23□□□□□ -0.93
NXF3-204ENST00000468528 EIF4A1P60842 406 aaKnown RBP9.23□□□□□ -0.93
NXF3-204ENST00000468528 TSR2Q969E8 191 aaKnown RBP9.23□□□□□ -0.93
NXF3-204ENST00000468528 SIPA1L3O60292 1781 aaPredicted RBP9.22□□□□□ -0.93
NXF3-204ENST00000468528 EXOSC9Q06265 439 aaKnown RBP9.22□□□□□ -0.93
NXF3-204ENST00000468528 TWISTNBQ3B726 338 aaPredicted RBP9.22□□□□□ -0.93
NXF3-204ENST00000468528 CCDC125Q86Z20 511 aa9.22□□□□□ -0.93
NXF3-204ENST00000468528 ACSBG1Q96GR2 724 aa9.22□□□□□ -0.93
NXF3-204ENST00000468528 ATG3Q9NT62 314 aa9.22□□□□□ -0.93
NXF3-204ENST00000468528 MIS18AQ9NYP9 233 aa9.22□□□□□ -0.93
NXF3-204ENST00000468528 NHSQ6T4R5 1651 aa9.22□□□□□ -0.93
NXF3-204ENST00000468528 TOGARAM1Q9Y4F4 1720 aa9.22□□□□□ -0.93
NXF3-204ENST00000468528 KCNQ2O43526 872 aa9.21□□□□□ -0.94
NXF3-204ENST00000468528 GIGYF1O75420 1035 aaPredicted RBP9.21□□□□□ -0.94
NXF3-204ENST00000468528 STARD3NLO95772 234 aa9.21□□□□□ -0.94
NXF3-204ENST00000468528 ALDH1L2Q3SY69 923 aa9.21□□□□□ -0.94
NXF3-204ENST00000468528 CCDC30Q5VVM6 783 aa9.21□□□□□ -0.94
NXF3-204ENST00000468528 ZNF496Q96IT1 587 aaPredicted RBP9.21□□□□□ -0.94
NXF3-204ENST00000468528 ASAP1Q9ULH1 1129 aa9.21□□□□□ -0.94
NXF3-204ENST00000468528 DOT1LQ8TEK3 1739 aa9.21□□□□□ -0.94
NXF3-204ENST00000468528 ERBB4Q15303 1308 aa9.21□□□□□ -0.94
NXF3-204ENST00000468528 KDM3BQ7LBC6 1761 aa9.21□□□□□ -0.94
NXF3-204ENST00000468528 PALLDQ8WX93 1383 aa9.21□□□□□ -0.94
NXF3-204ENST00000468528 PLSCR1O15162 318 aa9.2□□□□□ -0.94
NXF3-204ENST00000468528 VAMP4O75379 141 aa9.2□□□□□ -0.94
NXF3-204ENST00000468528 BRPF1P55201 1214 aaPredicted RBP9.2□□□□□ -0.94
NXF3-204ENST00000468528 SLC39A6Q13433 755 aa9.2□□□□□ -0.94
NXF3-204ENST00000468528 SLC27A3Q5K4L6 730 aa9.2□□□□□ -0.94
NXF3-204ENST00000468528 C8orf58Q8NAV2 365 aa9.2□□□□□ -0.94
NXF3-204ENST00000468528 STK31Q9BXU1 1019 aa9.2□□□□□ -0.94
NXF3-204ENST00000468528 RCAN3Q9UKA8 241 aa9.2□□□□□ -0.94
NXF3-204ENST00000468528 PAPPAQ13219 1627 aa9.2□□□□□ -0.94
NXF3-204ENST00000468528 VIRMAQ69YN4 1812 aaKnown RBP9.19□□□□□ -0.94
NXF3-204ENST00000468528 BRWD3Q6RI45 1802 aa9.19□□□□□ -0.94
NXF3-204ENST00000468528 LOC102724428A0A0B4J2F2 783 aa9.19□□□□□ -0.94
NXF3-204ENST00000468528 PTCD1O75127 700 aaKnown RBP9.19□□□□□ -0.94
NXF3-204ENST00000468528 TRIM37O94972 964 aa9.19□□□□□ -0.94
NXF3-204ENST00000468528 SIK1P57059 783 aa9.19□□□□□ -0.94
NXF3-204ENST00000468528 SF3B2Q13435 895 aaKnown RBP9.19□□□□□ -0.94
NXF3-204ENST00000468528 FAM182BQ5T319 152 aa9.19□□□□□ -0.94
NXF3-204ENST00000468528 GOLGA6L2Q8N9W4 650 aaPredicted RBP9.19□□□□□ -0.94
NXF3-204ENST00000468528 DBF4Q9UBU7 674 aaPredicted RBP9.19□□□□□ -0.94
NXF3-204ENST00000468528 KCPQ6ZWJ8 1503 aa9.19□□□□□ -0.94
NXF3-204ENST00000468528 ITGB4P16144 1822 aa9.19□□□□□ -0.94
NXF3-204ENST00000468528 KCNQ3O43525 872 aa9.18□□□□□ -0.94
NXF3-204ENST00000468528 RARSP54136 660 aaKnown RBP9.18□□□□□ -0.94
NXF3-204ENST00000468528 ZNF831Q5JPB2 1677 aa9.18□□□□□ -0.94
NXF3-204ENST00000468528 HDGFL1Q5TGJ6 251 aa9.18□□□□□ -0.94
NXF3-204ENST00000468528 UBR2Q8IWV8 1755 aa9.18□□□□□ -0.94
NXF3-204ENST00000468528 KIF16BQ96L93 1317 aa9.18□□□□□ -0.94
NXF3-204ENST00000468528 RBM42Q9BTD8 480 aaKnown RBP9.18□□□□□ -0.94
NXF3-204ENST00000468528 ELL2O00472 640 aaPredicted RBP9.17□□□□□ -0.94
NXF3-204ENST00000468528 IPO8O15397 1037 aaKnown RBP9.17□□□□□ -0.94
NXF3-204ENST00000468528 MS4A1P11836 297 aa9.17□□□□□ -0.94
NXF3-204ENST00000468528 ATP6V1AP38606 617 aa9.17□□□□□ -0.94
NXF3-204ENST00000468528 RC3H1Q5TC82 1133 aaKnown RBP9.17□□□□□ -0.94
NXF3-204ENST00000468528 TSPYL6Q8N831 410 aa9.17□□□□□ -0.94
NXF3-204ENST00000468528 HYPKQ9NX55 129 aa9.17□□□□□ -0.94
NXF3-204ENST00000468528 KAT6BQ8WYB5 2073 aa9.17□□□□□ -0.94
NXF3-204ENST00000468528 SBF2Q86WG5 1849 aa9.17□□□□□ -0.94
NXF3-204ENST00000468528 CICQ96RK0 1608 aaPredicted RBP9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms