RNA–Protein interactions for RNA: ENST00000468477.1

CDHR3-206, Transcript of cadherin related family member 3, humanhuman

TSL 2

Gene CDHR3, Length 482 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-206ENST00000468477 SND1Q7KZF4 910 aaKnown RBP eCLIP5.32□□□□□ -1.56
CDHR3-206ENST00000468477 PRICKLE2Q7Z3G6 844 aa5.32□□□□□ -1.56
CDHR3-206ENST00000468477 NANOS1Q8WY41 292 aaKnown RBP5.32□□□□□ -1.56
CDHR3-206ENST00000468477 SPATA32Q96LK8 384 aa5.32□□□□□ -1.56
CDHR3-206ENST00000468477 IVNS1ABPQ9Y6Y0 642 aa5.32□□□□□ -1.56
CDHR3-206ENST00000468477 A0A1W2PRU2 124 aa5.31□□□□□ -1.56
CDHR3-206ENST00000468477 SLC35F4A4IF30 521 aa5.31□□□□□ -1.56
CDHR3-206ENST00000468477 H7C1W4 665 aa5.31□□□□□ -1.56
CDHR3-206ENST00000468477 NCLP19338 710 aaKnown RBP5.31□□□□□ -1.56
CDHR3-206ENST00000468477 USP4Q13107 963 aa5.31□□□□□ -1.56
CDHR3-206ENST00000468477 ANKRD13AQ8IZ07 590 aa5.31□□□□□ -1.56
CDHR3-206ENST00000468477 GMCL1Q96IK5 515 aa5.31□□□□□ -1.56
CDHR3-206ENST00000468477 CEP126Q9P2H0 1117 aa5.31□□□□□ -1.56
CDHR3-206ENST00000468477 TBC1D2BQ9UPU7 963 aa5.31□□□□□ -1.56
CDHR3-206ENST00000468477 CADPSQ9ULU8 1353 aa5.3□□□□□ -1.56
CDHR3-206ENST00000468477 GNRH1P01148 92 aa5.3□□□□□ -1.56
CDHR3-206ENST00000468477 NEFLP07196 543 aa5.3□□□□□ -1.56
CDHR3-206ENST00000468477 SOX11P35716 441 aa5.3□□□□□ -1.56
CDHR3-206ENST00000468477 ABL2P42684 1182 aa5.3□□□□□ -1.56
CDHR3-206ENST00000468477 SEMA3FQ13275 785 aa5.3□□□□□ -1.56
CDHR3-206ENST00000468477 ESCO1Q5FWF5 840 aa5.3□□□□□ -1.56
CDHR3-206ENST00000468477 ZNF526Q8TF50 670 aaPredicted RBP5.3□□□□□ -1.56
CDHR3-206ENST00000468477 DRC1Q96MC2 740 aa5.3□□□□□ -1.56
CDHR3-206ENST00000468477 RBM47A0AV96 593 aaKnown RBP5.29□□□□□ -1.56
CDHR3-206ENST00000468477 CLN3Q13286 438 aa5.29□□□□□ -1.56
CDHR3-206ENST00000468477 RIPOR1Q6ZS17 1223 aa5.29□□□□□ -1.56
CDHR3-206ENST00000468477 RNF135Q8IUD6 432 aa5.29□□□□□ -1.56
CDHR3-206ENST00000468477 VWA5B2Q8N398 1253 aa5.29□□□□□ -1.56
CDHR3-206ENST00000468477 DOLKQ9UPQ8 538 aa5.29□□□□□ -1.56
CDHR3-206ENST00000468477 COG6Q9Y2V7 657 aa5.29□□□□□ -1.56
CDHR3-206ENST00000468477 CSB-PGBD3P0DP91 1061 aa5.28□□□□□ -1.56
CDHR3-206ENST00000468477 CALR3Q96L12 384 aaKnown RBP5.28□□□□□ -1.56
CDHR3-206ENST00000468477 CNTNAP3BQ96NU0 1288 aa5.28□□□□□ -1.56
CDHR3-206ENST00000468477 TRERF1Q96PN7 1200 aa5.28□□□□□ -1.56
CDHR3-206ENST00000468477 COL25A1Q9BXS0 654 aaPredicted RBP5.28□□□□□ -1.56
CDHR3-206ENST00000468477 CNTNAP3Q9BZ76 1288 aa5.28□□□□□ -1.56
CDHR3-206ENST00000468477 GDPD2Q9HCC8 539 aa5.28□□□□□ -1.56
CDHR3-206ENST00000468477 ARHGEF10LQ9HCE6 1279 aa5.28□□□□□ -1.56
CDHR3-206ENST00000468477 DYRK1BQ9Y463 629 aa5.28□□□□□ -1.56
CDHR3-206ENST00000468477 RNF225M0QZC1 329 aaPredicted RBP5.27□□□□□ -1.57
CDHR3-206ENST00000468477 RHOQP17081 205 aa5.27□□□□□ -1.57
CDHR3-206ENST00000468477 MAP7D1Q3KQU3 841 aa5.27□□□□□ -1.57
CDHR3-206ENST00000468477 WDR44Q5JSH3 913 aa5.27□□□□□ -1.57
CDHR3-206ENST00000468477 GNASQ5JWF2 1037 aa5.27□□□□□ -1.57
CDHR3-206ENST00000468477 TMED8Q6PL24 325 aaPredicted RBP5.27□□□□□ -1.57
CDHR3-206ENST00000468477 TAS1R3Q7RTX0 852 aa5.27□□□□□ -1.57
CDHR3-206ENST00000468477 KDF1Q8NAX2 398 aaPredicted RBP5.27□□□□□ -1.57
CDHR3-206ENST00000468477 CNKSR1Q969H4 720 aa5.27□□□□□ -1.57
CDHR3-206ENST00000468477 MRRFQ96E11 262 aaKnown RBP5.27□□□□□ -1.57
CDHR3-206ENST00000468477 GAS2L1Q99501 681 aaPredicted RBP5.27□□□□□ -1.57
CDHR3-206ENST00000468477 KIAA1522Q9P206 1035 aaPredicted RBP5.27□□□□□ -1.57
CDHR3-206ENST00000468477 NSFL1CQ9UNZ2 370 aaKnown RBP5.27□□□□□ -1.57
CDHR3-206ENST00000468477 USTQ9Y2C2 406 aa5.27□□□□□ -1.57
CDHR3-206ENST00000468477 CARNS1A5YM72 827 aa5.26□□□□□ -1.57
CDHR3-206ENST00000468477 WASLO00401 505 aaPredicted RBP5.26□□□□□ -1.57
CDHR3-206ENST00000468477 SCTRP47872 440 aa5.26□□□□□ -1.57
CDHR3-206ENST00000468477 MAP3K10Q02779 954 aa5.26□□□□□ -1.57
CDHR3-206ENST00000468477 VAC14Q08AM6 782 aa5.26□□□□□ -1.57
CDHR3-206ENST00000468477 OXLD1Q5BKU9 147 aa5.26□□□□□ -1.57
CDHR3-206ENST00000468477 TMEM214Q6NUQ4 689 aaKnown RBP5.26□□□□□ -1.57
CDHR3-206ENST00000468477 NOL8Q76FK4 1167 aaKnown RBP5.26□□□□□ -1.57
CDHR3-206ENST00000468477 TRIM22Q8IYM9 498 aa5.26□□□□□ -1.57
CDHR3-206ENST00000468477 SVOPQ8N4V2 548 aa5.26□□□□□ -1.57
CDHR3-206ENST00000468477 ZSCAN10Q96SZ4 725 aaPredicted RBP5.26□□□□□ -1.57
CDHR3-206ENST00000468477 ESYT1Q9BSJ8 1104 aa5.26□□□□□ -1.57
CDHR3-206ENST00000468477 OSBPL3Q9H4L5 887 aa5.26□□□□□ -1.57
CDHR3-206ENST00000468477 TIMMDC1Q9NPL8 285 aa5.26□□□□□ -1.57
CDHR3-206ENST00000468477 ENAMQ9NRM1 1142 aa5.26□□□□□ -1.57
CDHR3-206ENST00000468477 PPP1R1BQ9UD71 204 aaPredicted RBP5.26□□□□□ -1.57
CDHR3-206ENST00000468477 ANKRD62A6NC57 917 aa5.25□□□□□ -1.57
CDHR3-206ENST00000468477 POU4F2Q12837 409 aa5.25□□□□□ -1.57
CDHR3-206ENST00000468477 NBPF10Q6P3W6 841 aaKnown RBP5.25□□□□□ -1.57
CDHR3-206ENST00000468477 PGBD3Q8N328 593 aa5.25□□□□□ -1.57
CDHR3-206ENST00000468477 NBPF15Q8N660 670 aa5.25□□□□□ -1.57
CDHR3-206ENST00000468477 SREK1Q8WXA9 508 aaKnown RBP5.25□□□□□ -1.57
CDHR3-206ENST00000468477 PBXIP1Q96AQ6 731 aa5.25□□□□□ -1.57
CDHR3-206ENST00000468477 GRIP2Q9C0E4 1043 aa5.25□□□□□ -1.57
CDHR3-206ENST00000468477 RAB6BQ9NRW1 208 aa5.25□□□□□ -1.57
CDHR3-206ENST00000468477 SENP3-EIF4A1A0A087X0R7 540 aa5.24□□□□□ -1.57
CDHR3-206ENST00000468477 LOC100996750A0A140TA64 210 aa5.24□□□□□ -1.57
CDHR3-206ENST00000468477 SPATA31C2B4DYI2 1134 aa5.24□□□□□ -1.57
CDHR3-206ENST00000468477 GPR37L1O60883 481 aa5.24□□□□□ -1.57
CDHR3-206ENST00000468477 F11P03951 625 aa5.24□□□□□ -1.57
CDHR3-206ENST00000468477 LORP23490 312 aaPredicted RBP5.24□□□□□ -1.57
CDHR3-206ENST00000468477 IRX6P78412 446 aaPredicted RBP5.24□□□□□ -1.57
CDHR3-206ENST00000468477 CENPCQ03188 943 aa5.24□□□□□ -1.57
CDHR3-206ENST00000468477 GPR161Q8N6U8 529 aaKnown RBP5.24□□□□□ -1.57
CDHR3-206ENST00000468477 CCDC85AQ96PX6 553 aaPredicted RBP5.24□□□□□ -1.57
CDHR3-206ENST00000468477 KRTAP4-6Q9BYQ5 205 aa5.24□□□□□ -1.57
CDHR3-206ENST00000468477 A0A1B0GTH6 734 aa5.23□□□□□ -1.57
CDHR3-206ENST00000468477 RFX1P22670 979 aa5.23□□□□□ -1.57
CDHR3-206ENST00000468477 SRSF11Q05519 484 aaKnown RBP5.23□□□□□ -1.57
CDHR3-206ENST00000468477 CDCA7Q9BWT1 371 aaPredicted RBP5.23□□□□□ -1.57
CDHR3-206ENST00000468477 NUCKS1Q9H1E3 243 aaKnown RBP5.23□□□□□ -1.57
CDHR3-206ENST00000468477 PRDM16Q9HAZ2 1276 aa5.23□□□□□ -1.57
CDHR3-206ENST00000468477 PHF24Q9UPV7 400 aa5.23□□□□□ -1.57
CDHR3-206ENST00000468477 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP5.22□□□□□ -1.57
CDHR3-206ENST00000468477 LZTS3O60299 673 aaPredicted RBP5.22□□□□□ -1.57
CDHR3-206ENST00000468477 MARCH6O60337 910 aa5.22□□□□□ -1.57
CDHR3-206ENST00000468477 TCF3P15923 654 aa5.22□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms