RNA–Protein interactions for RNA: ENST00000468475.1

POLR1B-211, Transcript of RNA polymerase I subunit B, humanhuman

TSL 4

Gene POLR1B, Length 569 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1B-211ENST00000468475 NBPF1Q3BBV0 1214 aa10.36□□□□□ -0.75
POLR1B-211ENST00000468475 CCDC87Q9NVE4 849 aa10.36□□□□□ -0.75
POLR1B-211ENST00000468475 PIM2Q9P1W9 311 aa10.36□□□□□ -0.75
POLR1B-211ENST00000468475 MKRN1Q9UHC7 482 aaKnown RBP10.36□□□□□ -0.75
POLR1B-211ENST00000468475 C4AP0C0L4 1744 aa10.36□□□□□ -0.75
POLR1B-211ENST00000468475 CGNL1Q0VF96 1302 aa10.35□□□□□ -0.75
POLR1B-211ENST00000468475 KCNA3P22001 575 aa10.35□□□□□ -0.75
POLR1B-211ENST00000468475 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.35□□□□□ -0.75
POLR1B-211ENST00000468475 LTV1Q96GA3 475 aaPredicted RBP10.35□□□□□ -0.75
POLR1B-211ENST00000468475 GLTPD2A6NH11 291 aa10.34□□□□□ -0.75
POLR1B-211ENST00000468475 LBX1P52954 281 aa10.34□□□□□ -0.75
POLR1B-211ENST00000468475 DALRD3Q5D0E6 543 aaKnown RBP10.34□□□□□ -0.75
POLR1B-211ENST00000468475 MPRIPQ6WCQ1 1025 aa10.34□□□□□ -0.75
POLR1B-211ENST00000468475 NLGN1Q8N2Q7 840 aa10.34□□□□□ -0.75
POLR1B-211ENST00000468475 VIRMAQ69YN4 1812 aaKnown RBP10.34□□□□□ -0.75
POLR1B-211ENST00000468475 CNTNAP1P78357 1384 aa10.34□□□□□ -0.75
POLR1B-211ENST00000468475 PDE4DIPQ5VU43 2346 aa10.34□□□□□ -0.75
POLR1B-211ENST00000468475 GNPATO15228 680 aa10.33□□□□□ -0.76
POLR1B-211ENST00000468475 NME9Q86XW9 330 aa10.33□□□□□ -0.76
POLR1B-211ENST00000468475 KDM6AO15550 1401 aaPredicted RBP10.33□□□□□ -0.76
POLR1B-211ENST00000468475 CCDC88AQ3V6T2 1871 aa10.32□□□□□ -0.76
POLR1B-211ENST00000468475 CCDC85CA6NKD9 419 aa10.32□□□□□ -0.76
POLR1B-211ENST00000468475 TMF1P82094 1093 aa10.32□□□□□ -0.76
POLR1B-211ENST00000468475 LINC00116Q8NCU8 138 aa10.32□□□□□ -0.76
POLR1B-211ENST00000468475 WBP1LQ9NX94 342 aa10.32□□□□□ -0.76
POLR1B-211ENST00000468475 PCDH11XQ9BZA7 1347 aa10.32□□□□□ -0.76
POLR1B-211ENST00000468475 PCDH11YQ9BZA8 1340 aa10.32□□□□□ -0.76
POLR1B-211ENST00000468475 SBNO2Q9Y2G9 1366 aa10.31□□□□□ -0.76
POLR1B-211ENST00000468475 TIAM2Q8IVF5 1701 aa10.31□□□□□ -0.76
POLR1B-211ENST00000468475 LOC102724428A0A0B4J2F2 783 aa10.31□□□□□ -0.76
POLR1B-211ENST00000468475 SIK1P57059 783 aa10.31□□□□□ -0.76
POLR1B-211ENST00000468475 PARP3Q9Y6F1 533 aa10.31□□□□□ -0.76
POLR1B-211ENST00000468475 HSPA8P11142 646 aaKnown RBP10.3□□□□□ -0.76
POLR1B-211ENST00000468475 LMNB1P20700 586 aa10.3□□□□□ -0.76
POLR1B-211ENST00000468475 TRAPPC3LQ5T215 181 aa10.3□□□□□ -0.76
POLR1B-211ENST00000468475 RAPGEF4Q8WZA2 1011 aa10.3□□□□□ -0.76
POLR1B-211ENST00000468475 CD163L1Q9NR16 1453 aa10.3□□□□□ -0.76
POLR1B-211ENST00000468475 HOXC9P31274 260 aa10.29□□□□□ -0.76
POLR1B-211ENST00000468475 CHADLQ6NUI6 762 aa10.29□□□□□ -0.76
POLR1B-211ENST00000468475 POTECB2RU33 542 aa10.28□□□□□ -0.76
POLR1B-211ENST00000468475 TATP17735 454 aaPredicted RBP10.28□□□□□ -0.76
POLR1B-211ENST00000468475 VEGFBP49765 207 aa10.28□□□□□ -0.76
POLR1B-211ENST00000468475 RASSF7Q02833 373 aa10.28□□□□□ -0.76
POLR1B-211ENST00000468475 PIGBQ92521 554 aa10.28□□□□□ -0.76
POLR1B-211ENST00000468475 SPINK5Q9NQ38 1064 aaPredicted RBP10.28□□□□□ -0.76
POLR1B-211ENST00000468475 RTCBQ9Y3I0 505 aaKnown RBP10.28□□□□□ -0.76
POLR1B-211ENST00000468475 EDC4Q6P2E9 1401 aaKnown RBP10.27□□□□□ -0.77
POLR1B-211ENST00000468475 GYS1P13807 737 aa10.27□□□□□ -0.77
POLR1B-211ENST00000468475 ATP6V1AP38606 617 aa10.27□□□□□ -0.77
POLR1B-211ENST00000468475 AMPHP49418 695 aa10.27□□□□□ -0.77
POLR1B-211ENST00000468475 ITPK1Q13572 414 aa10.27□□□□□ -0.77
POLR1B-211ENST00000468475 DPY19L2Q6NUT2 758 aa10.27□□□□□ -0.77
POLR1B-211ENST00000468475 MAP3K19Q56UN5 1328 aa10.27□□□□□ -0.77
POLR1B-211ENST00000468475 DICER1Q9UPY3 1922 aaKnown RBP10.27□□□□□ -0.77
POLR1B-211ENST00000468475 TNRC18O15417 2968 aaPredicted RBP10.26□□□□□ -0.77
POLR1B-211ENST00000468475 CYP27B1O15528 508 aa10.26□□□□□ -0.77
POLR1B-211ENST00000468475 MAP2K1Q02750 393 aaPredicted RBP10.26□□□□□ -0.77
POLR1B-211ENST00000468475 NBPF6Q5VWK0 638 aa10.26□□□□□ -0.77
POLR1B-211ENST00000468475 NBPF4Q96M43 638 aa10.26□□□□□ -0.77
POLR1B-211ENST00000468475 PASKQ96RG2 1323 aa10.26□□□□□ -0.77
POLR1B-211ENST00000468475 CHRNA5P30532 468 aa10.25□□□□□ -0.77
POLR1B-211ENST00000468475 RFC4P35249 363 aa10.25□□□□□ -0.77
POLR1B-211ENST00000468475 HDGFL2Q7Z4V5 671 aaPredicted RBP10.25□□□□□ -0.77
POLR1B-211ENST00000468475 ARHGEF1Q92888 912 aaKnown RBP10.25□□□□□ -0.77
POLR1B-211ENST00000468475 RTL1A6NKG5 1358 aa10.25□□□□□ -0.77
POLR1B-211ENST00000468475 RAB3GAP2Q9H2M9 1393 aa10.25□□□□□ -0.77
POLR1B-211ENST00000468475 ZNF831Q5JPB2 1677 aa10.25□□□□□ -0.77
POLR1B-211ENST00000468475 SMG6Q86US8 1419 aaKnown RBP10.24□□□□□ -0.77
POLR1B-211ENST00000468475 TMEM88BA6NKF7 163 aa10.24□□□□□ -0.77
POLR1B-211ENST00000468475 USHBP1Q8N6Y0 703 aa10.24□□□□□ -0.77
POLR1B-211ENST00000468475 COL5A3P25940 1745 aaPredicted RBP10.24□□□□□ -0.77
POLR1B-211ENST00000468475 MYCNP04198 464 aaPredicted RBP10.23□□□□□ -0.77
POLR1B-211ENST00000468475 NKX1-1Q15270 411 aaPredicted RBP10.23□□□□□ -0.77
POLR1B-211ENST00000468475 RC3H1Q5TC82 1133 aaKnown RBP10.23□□□□□ -0.77
POLR1B-211ENST00000468475 SAMD1Q6SPF0 538 aaPredicted RBP10.23□□□□□ -0.77
POLR1B-211ENST00000468475 TMOD3Q9NYL9 352 aa10.23□□□□□ -0.77
POLR1B-211ENST00000468475 ASAP1Q9ULH1 1129 aa10.23□□□□□ -0.77
POLR1B-211ENST00000468475 DLEC1Q9Y238 1755 aa10.23□□□□□ -0.77
POLR1B-211ENST00000468475 POTEIP0CG38 1075 aa10.22□□□□□ -0.77
POLR1B-211ENST00000468475 POTEJP0CG39 1038 aa10.22□□□□□ -0.77
POLR1B-211ENST00000468475 CFAP44Q96MT7 982 aa10.22□□□□□ -0.77
POLR1B-211ENST00000468475 MYH14Q7Z406 1995 aaKnown RBP10.22□□□□□ -0.77
POLR1B-211ENST00000468475 SCN4AP35499 1836 aa10.21□□□□□ -0.77
POLR1B-211ENST00000468475 RASSF10A6NK89 507 aa10.21□□□□□ -0.77
POLR1B-211ENST00000468475 RPS6KA4O75676 772 aa10.21□□□□□ -0.77
POLR1B-211ENST00000468475 DEFB115Q30KQ5 88 aa10.21□□□□□ -0.77
POLR1B-211ENST00000468475 LDHDQ86WU2 507 aa10.21□□□□□ -0.77
POLR1B-211ENST00000468475 TMC1Q8TDI8 760 aa10.21□□□□□ -0.77
POLR1B-211ENST00000468475 COG3Q96JB2 828 aa10.21□□□□□ -0.77
POLR1B-211ENST00000468475 TERF2IPQ9NYB0 399 aa10.21□□□□□ -0.77
POLR1B-211ENST00000468475 CNTNAP4Q9C0A0 1308 aa10.21□□□□□ -0.78
POLR1B-211ENST00000468475 KDRP35968 1356 aa10.21□□□□□ -0.78
POLR1B-211ENST00000468475 A0A1W2PP64 1363 aa10.2□□□□□ -0.78
POLR1B-211ENST00000468475 DDR1Q08345 913 aa10.2□□□□□ -0.78
POLR1B-211ENST00000468475 BEGAINQ9BUH8 593 aa10.2□□□□□ -0.78
POLR1B-211ENST00000468475 THSD7BQ9C0I4 1608 aa10.2□□□□□ -0.78
POLR1B-211ENST00000468475 WDR33Q9C0J8 1336 aaKnown RBP10.2□□□□□ -0.78
POLR1B-211ENST00000468475 ATG3Q9NT62 314 aa10.2□□□□□ -0.78
POLR1B-211ENST00000468475 FOXD4L1Q9NU39 408 aa10.2□□□□□ -0.78
POLR1B-211ENST00000468475 IQCA1LA6NCM1 817 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms