RNA–Protein interactions for RNA: ENST00000468468.5

TSPAN4-211, Transcript of tetraspanin 4, humanhuman

TSL 2

Gene TSPAN4, Length 2,777 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-211ENST00000468468 CLEC17AQ6ZS10 378 aa19.44■□□□□ 0.7
TSPAN4-211ENST00000468468 MTHFSDQ2M296 383 aaKnown RBP19.43■□□□□ 0.7
TSPAN4-211ENST00000468468 ESCO1Q5FWF5 840 aa19.43■□□□□ 0.7
TSPAN4-211ENST00000468468 SLC4A10Q6U841 1118 aa19.43■□□□□ 0.7
TSPAN4-211ENST00000468468 BAG4O95429 457 aaKnown RBP19.43■□□□□ 0.7
TSPAN4-211ENST00000468468 MARF1Q9Y4F3 1742 aaKnown RBP19.42■□□□□ 0.7
TSPAN4-211ENST00000468468 HMMRO75330 724 aa19.42■□□□□ 0.7
TSPAN4-211ENST00000468468 HOXC9P31274 260 aa19.42■□□□□ 0.7
TSPAN4-211ENST00000468468 G2E3Q7L622 706 aa19.42■□□□□ 0.7
TSPAN4-211ENST00000468468 RTF1Q92541 710 aaKnown RBP19.42■□□□□ 0.7
TSPAN4-211ENST00000468468 TSPYL4Q9UJ04 414 aa19.42■□□□□ 0.7
TSPAN4-211ENST00000468468 LTV1Q96GA3 475 aaPredicted RBP19.42■□□□□ 0.7
TSPAN4-211ENST00000468468 IGSF1Q8N6C5 1336 aa19.41■□□□□ 0.7
TSPAN4-211ENST00000468468 F6X3S4 739 aa19.41■□□□□ 0.7
TSPAN4-211ENST00000468468 ADGRL3Q9HAR2 1447 aa19.41■□□□□ 0.7
TSPAN4-211ENST00000468468 NAP1L5Q96NT1 182 aaPredicted RBP19.41■□□□□ 0.7
TSPAN4-211ENST00000468468 CLCN1P35523 988 aa19.4■□□□□ 0.7
TSPAN4-211ENST00000468468 NUCB2P80303 420 aa19.4■□□□□ 0.7
TSPAN4-211ENST00000468468 DDX49Q9Y6V7 483 aaKnown RBP19.4■□□□□ 0.7
TSPAN4-211ENST00000468468 KDRP35968 1356 aa19.4■□□□□ 0.7
TSPAN4-211ENST00000468468 REC8O95072 547 aa19.39■□□□□ 0.69
TSPAN4-211ENST00000468468 CCT4P50991 539 aaKnown RBP19.39■□□□□ 0.69
TSPAN4-211ENST00000468468 ST18O60284 1047 aa19.38■□□□□ 0.69
TSPAN4-211ENST00000468468 PSME1Q06323 249 aa19.38■□□□□ 0.69
TSPAN4-211ENST00000468468 HSP90AA2PQ14568 343 aaPredicted RBP19.38■□□□□ 0.69
TSPAN4-211ENST00000468468 ORAI2Q96SN7 254 aa19.38■□□□□ 0.69
TSPAN4-211ENST00000468468 KLHL40Q2TBA0 621 aa19.38■□□□□ 0.69
TSPAN4-211ENST00000468468 ERC2O15083 957 aa19.37■□□□□ 0.69
TSPAN4-211ENST00000468468 XPCQ01831 940 aaPredicted RBP19.37■□□□□ 0.69
TSPAN4-211ENST00000468468 MCTP1Q6DN14 999 aa19.37■□□□□ 0.69
TSPAN4-211ENST00000468468 AK9Q5TCS8 1911 aa19.37■□□□□ 0.69
TSPAN4-211ENST00000468468 PDE1AP54750 535 aa19.37■□□□□ 0.69
TSPAN4-211ENST00000468468 OSBPL3Q9H4L5 887 aa19.36■□□□□ 0.69
TSPAN4-211ENST00000468468 CYP2E1P05181 493 aaPredicted RBP19.36■□□□□ 0.69
TSPAN4-211ENST00000468468 TRIM44Q96DX7 344 aaPredicted RBP19.36■□□□□ 0.69
TSPAN4-211ENST00000468468 CWC22Q9HCG8 908 aaKnown RBP19.36■□□□□ 0.69
TSPAN4-211ENST00000468468 GNAI2P04899 355 aa19.35■□□□□ 0.69
TSPAN4-211ENST00000468468 STK31Q9BXU1 1019 aa19.35■□□□□ 0.69
TSPAN4-211ENST00000468468 ZBTB7CA1YPR0 619 aa19.35■□□□□ 0.69
TSPAN4-211ENST00000468468 ESPNB1AK53 854 aa19.35■□□□□ 0.69
TSPAN4-211ENST00000468468 PKP1Q13835 747 aa19.35■□□□□ 0.69
TSPAN4-211ENST00000468468 USHBP1Q8N6Y0 703 aa19.35■□□□□ 0.69
TSPAN4-211ENST00000468468 EXOC6BQ9Y2D4 811 aa19.34■□□□□ 0.69
TSPAN4-211ENST00000468468 ZGPATQ8N5A5 531 aaKnown RBP19.34■□□□□ 0.69
TSPAN4-211ENST00000468468 USP54Q70EL1 1684 aa19.33■□□□□ 0.69
TSPAN4-211ENST00000468468 NWD1Q149M9 1564 aa19.33■□□□□ 0.68
TSPAN4-211ENST00000468468 PROSER2Q86WR7 435 aaPredicted RBP19.32■□□□□ 0.68
TSPAN4-211ENST00000468468 NCLP19338 710 aaKnown RBP19.32■□□□□ 0.68
TSPAN4-211ENST00000468468 IBTKQ9P2D0 1353 aaPredicted RBP19.32■□□□□ 0.68
TSPAN4-211ENST00000468468 ERBB4Q15303 1308 aa19.32■□□□□ 0.68
TSPAN4-211ENST00000468468 LMBRD1Q9NUN5 540 aa19.32■□□□□ 0.68
TSPAN4-211ENST00000468468 TSHZ3Q63HK5 1081 aa19.31■□□□□ 0.68
TSPAN4-211ENST00000468468 NASPP49321 788 aaPredicted RBP19.31■□□□□ 0.68
TSPAN4-211ENST00000468468 FLIIQ13045 1269 aa19.31■□□□□ 0.68
TSPAN4-211ENST00000468468 FKBP5Q13451 457 aaPredicted RBP19.31■□□□□ 0.68
TSPAN4-211ENST00000468468 NECTIN2Q92692 538 aa19.3■□□□□ 0.68
TSPAN4-211ENST00000468468 LRRCC1Q9C099 1032 aa19.3■□□□□ 0.68
TSPAN4-211ENST00000468468 GNAI3P08754 354 aa19.3■□□□□ 0.68
TSPAN4-211ENST00000468468 CCDC30Q5VVM6 783 aa19.3■□□□□ 0.68
TSPAN4-211ENST00000468468 LMOD2Q6P5Q4 547 aa19.3■□□□□ 0.68
TSPAN4-211ENST00000468468 CAVIN1Q6NZI2 390 aaKnown RBP19.29■□□□□ 0.68
TSPAN4-211ENST00000468468 IP6K1Q92551 441 aa19.29■□□□□ 0.68
TSPAN4-211ENST00000468468 LTN1O94822 1766 aa19.29■□□□□ 0.68
TSPAN4-211ENST00000468468 NFAT5O94916 1531 aa19.29■□□□□ 0.68
TSPAN4-211ENST00000468468 PNMA6EA0A0J9YXQ4 647 aa19.28■□□□□ 0.68
TSPAN4-211ENST00000468468 HTATSF1O43719 755 aaKnown RBP19.28■□□□□ 0.68
TSPAN4-211ENST00000468468 ZDHHC9Q9Y397 364 aa19.28■□□□□ 0.68
TSPAN4-211ENST00000468468 SALL3Q9BXA9 1300 aa19.28■□□□□ 0.68
TSPAN4-211ENST00000468468 NEK4P51957 841 aa19.28■□□□□ 0.68
TSPAN4-211ENST00000468468 ATP8B2P98198 1209 aa19.28■□□□□ 0.68
TSPAN4-211ENST00000468468 CCDC173Q0VFZ6 552 aa19.28■□□□□ 0.68
TSPAN4-211ENST00000468468 GNAT3A8MTJ3 354 aa19.27■□□□□ 0.68
TSPAN4-211ENST00000468468 MX1P20591 662 aa19.27■□□□□ 0.68
TSPAN4-211ENST00000468468 ESYT1Q9BSJ8 1104 aa19.27■□□□□ 0.68
TSPAN4-211ENST00000468468 RRP9O43818 475 aaKnown RBP19.27■□□□□ 0.68
TSPAN4-211ENST00000468468 PRPF40AO75400 957 aaKnown RBP19.27■□□□□ 0.68
TSPAN4-211ENST00000468468 ZNF445P59923 1031 aa19.27■□□□□ 0.68
TSPAN4-211ENST00000468468 NBPF6Q5VWK0 638 aa19.27■□□□□ 0.68
TSPAN4-211ENST00000468468 ANP32BQ92688 251 aaKnown RBP19.27■□□□□ 0.68
TSPAN4-211ENST00000468468 NBPF4Q96M43 638 aa19.27■□□□□ 0.68
TSPAN4-211ENST00000468468 ZSCAN23Q3MJ62 389 aa19.26■□□□□ 0.67
TSPAN4-211ENST00000468468 IL17REQ8NFR9 667 aa19.26■□□□□ 0.67
TSPAN4-211ENST00000468468 RILPL2Q969X0 211 aa19.26■□□□□ 0.67
TSPAN4-211ENST00000468468 TRIM6-TRIM34B2RNG4 842 aa19.26■□□□□ 0.67
TSPAN4-211ENST00000468468 KCNH5Q8NCM2 988 aa19.26■□□□□ 0.67
TSPAN4-211ENST00000468468 PPP1R9BQ96SB3 815 aa19.26■□□□□ 0.67
TSPAN4-211ENST00000468468 GCP02774 474 aa19.25■□□□□ 0.67
TSPAN4-211ENST00000468468 LRRC59Q96AG4 307 aaKnown RBP19.25■□□□□ 0.67
TSPAN4-211ENST00000468468 TMX3Q96JJ7 454 aa19.25■□□□□ 0.67
TSPAN4-211ENST00000468468 LRRFIP2Q9Y608 721 aaKnown RBP19.25■□□□□ 0.67
TSPAN4-211ENST00000468468 MCCP23508 829 aa19.24■□□□□ 0.67
TSPAN4-211ENST00000468468 MAP3K5Q99683 1374 aa19.24■□□□□ 0.67
TSPAN4-211ENST00000468468 CHMLP26374 656 aa19.24■□□□□ 0.67
TSPAN4-211ENST00000468468 MCM2P49736 904 aa19.23■□□□□ 0.67
TSPAN4-211ENST00000468468 FOXD4L5Q5VV16 416 aaPredicted RBP19.23■□□□□ 0.67
TSPAN4-211ENST00000468468 KRT28Q7Z3Y7 464 aa19.23■□□□□ 0.67
TSPAN4-211ENST00000468468 FOXD4L4Q8WXT5 416 aaPredicted RBP19.23■□□□□ 0.67
TSPAN4-211ENST00000468468 ANO2Q9NQ90 1003 aa19.23■□□□□ 0.67
TSPAN4-211ENST00000468468 GPT2Q8TD30 523 aa19.22■□□□□ 0.67
TSPAN4-211ENST00000468468 CHAMP1Q96JM3 812 aa19.22■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms