RNA–Protein interactions for RNA: ENST00000467319.1

MSH5-212, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 688 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-212ENST00000467319 NFE2L2Q16236 605 aa14.67□□□□□ -0.06
MSH5-212ENST00000467319 IL17REQ8NFR9 667 aa14.67□□□□□ -0.06
MSH5-212ENST00000467319 PNNQ9H307 717 aaKnown RBP14.67□□□□□ -0.06
MSH5-212ENST00000467319 ANO8Q9HCE9 1232 aaPredicted RBP14.67□□□□□ -0.06
MSH5-212ENST00000467319 LRRC4BQ9NT99 713 aa14.67□□□□□ -0.06
MSH5-212ENST00000467319 ADAMTS8Q9UP79 889 aa14.67□□□□□ -0.06
MSH5-212ENST00000467319 CASZ1Q86V15 1759 aa14.67□□□□□ -0.06
MSH5-212ENST00000467319 MAPK8IP3Q9UPT6 1336 aa14.66□□□□□ -0.06
MSH5-212ENST00000467319 HTATSF1O43719 755 aaKnown RBP14.66□□□□□ -0.06
MSH5-212ENST00000467319 CABP4P57796 275 aa14.66□□□□□ -0.06
MSH5-212ENST00000467319 SMARCC1Q92922 1105 aaPredicted RBP14.66□□□□□ -0.06
MSH5-212ENST00000467319 ATG3Q9NT62 314 aa14.66□□□□□ -0.06
MSH5-212ENST00000467319 ASAP1Q9ULH1 1129 aa14.66□□□□□ -0.06
MSH5-212ENST00000467319 C4BP0C0L5 1744 aa14.66□□□□□ -0.06
MSH5-212ENST00000467319 PNISRQ8TF01 805 aaKnown RBP14.65□□□□□ -0.06
MSH5-212ENST00000467319 MRS2Q9HD23 443 aa14.65□□□□□ -0.06
MSH5-212ENST00000467319 KDM3BQ7LBC6 1761 aa14.65□□□□□ -0.06
MSH5-212ENST00000467319 NFATC2IPQ8NCF5 419 aa14.64□□□□□ -0.07
MSH5-212ENST00000467319 RUNDC1Q96C34 613 aa14.64□□□□□ -0.07
MSH5-212ENST00000467319 SRCAPQ6ZRS2 3230 aa14.63□□□□□ -0.07
MSH5-212ENST00000467319 NEFMP07197 916 aa14.63□□□□□ -0.07
MSH5-212ENST00000467319 CCDC146Q8IYE0 955 aa14.63□□□□□ -0.07
MSH5-212ENST00000467319 CCNL1Q9UK58 526 aaPredicted RBP14.63□□□□□ -0.07
MSH5-212ENST00000467319 LOC102724428A0A0B4J2F2 783 aa14.62□□□□□ -0.07
MSH5-212ENST00000467319 TMPOP42166 694 aaKnown RBP14.62□□□□□ -0.07
MSH5-212ENST00000467319 SIK1P57059 783 aa14.62□□□□□ -0.07
MSH5-212ENST00000467319 SLC4A9Q96Q91 983 aa14.62□□□□□ -0.07
MSH5-212ENST00000467319 UBR3Q6ZT12 1888 aa14.61□□□□□ -0.07
MSH5-212ENST00000467319 KCNQ4P56696 695 aa14.61□□□□□ -0.07
MSH5-212ENST00000467319 TEFQ10587 303 aa14.61□□□□□ -0.07
MSH5-212ENST00000467319 ZNF827Q17R98 1081 aa14.61□□□□□ -0.07
MSH5-212ENST00000467319 MCM10Q7L590 875 aa14.61□□□□□ -0.07
MSH5-212ENST00000467319 AKT1S1Q96B36 256 aa14.61□□□□□ -0.07
MSH5-212ENST00000467319 LRP5O75197 1615 aa14.6□□□□□ -0.07
MSH5-212ENST00000467319 ITPK1Q13572 414 aa14.6□□□□□ -0.07
MSH5-212ENST00000467319 DCTN1Q14203 1278 aa14.6□□□□□ -0.07
MSH5-212ENST00000467319 RTF1Q92541 710 aaKnown RBP14.6□□□□□ -0.07
MSH5-212ENST00000467319 R3HDM1Q15032 1099 aaKnown RBP14.59□□□□□ -0.07
MSH5-212ENST00000467319 LAMB4A4D0S4 1761 aa14.58□□□□□ -0.08
MSH5-212ENST00000467319 CCER2I3L3R5 266 aa14.58□□□□□ -0.08
MSH5-212ENST00000467319 LMOD3Q0VAK6 560 aa14.58□□□□□ -0.08
MSH5-212ENST00000467319 SLC15A2Q16348 729 aa14.58□□□□□ -0.08
MSH5-212ENST00000467319 NBPF14Q5TI25 921 aa14.58□□□□□ -0.08
MSH5-212ENST00000467319 DIEXFQ68CQ4 756 aaKnown RBP14.58□□□□□ -0.08
MSH5-212ENST00000467319 LINC00116Q8NCU8 138 aa14.58□□□□□ -0.08
MSH5-212ENST00000467319 TRIM35Q9UPQ4 493 aa14.58□□□□□ -0.08
MSH5-212ENST00000467319 COL24A1Q17RW2 1714 aa14.58□□□□□ -0.08
MSH5-212ENST00000467319 PSDA5PKW4 1024 aaPredicted RBP14.57□□□□□ -0.08
MSH5-212ENST00000467319 RIPK4P57078 832 aa14.57□□□□□ -0.08
MSH5-212ENST00000467319 SLC39A6Q13433 755 aa14.57□□□□□ -0.08
MSH5-212ENST00000467319 ZNF790Q6PG37 636 aa14.57□□□□□ -0.08
MSH5-212ENST00000467319 THUMPD2Q9BTF0 503 aaKnown RBP14.57□□□□□ -0.08
MSH5-212ENST00000467319 STK32BQ9NY57 414 aa14.57□□□□□ -0.08
MSH5-212ENST00000467319 RRP7AQ9Y3A4 280 aaKnown RBP14.57□□□□□ -0.08
MSH5-212ENST00000467319 MYH14Q7Z406 1995 aaKnown RBP14.56□□□□□ -0.08
MSH5-212ENST00000467319 PTCD1O75127 700 aaKnown RBP14.56□□□□□ -0.08
MSH5-212ENST00000467319 CNTNAP4Q9C0A0 1308 aa14.56□□□□□ -0.08
MSH5-212ENST00000467319 HEG1Q9ULI3 1381 aa14.56□□□□□ -0.08
MSH5-212ENST00000467319 C4AP0C0L4 1744 aa14.55□□□□□ -0.08
MSH5-212ENST00000467319 APAF1O14727 1248 aa14.55□□□□□ -0.08
MSH5-212ENST00000467319 HMGB2P26583 209 aaKnown RBP14.55□□□□□ -0.08
MSH5-212ENST00000467319 ATP6V1AP38606 617 aa14.55□□□□□ -0.08
MSH5-212ENST00000467319 VSIG10Q8N0Z9 540 aa14.55□□□□□ -0.08
MSH5-212ENST00000467319 RBM42Q9BTD8 480 aaKnown RBP14.55□□□□□ -0.08
MSH5-212ENST00000467319 PNPLA7Q6ZV29 1317 aa14.55□□□□□ -0.08
MSH5-212ENST00000467319 BTBD11A6QL63 1104 aa14.54□□□□□ -0.08
MSH5-212ENST00000467319 TAF7Q15545 349 aaPredicted RBP14.54□□□□□ -0.08
MSH5-212ENST00000467319 NCBP3Q53F19 620 aaKnown RBP14.54□□□□□ -0.08
MSH5-212ENST00000467319 AMIGO3Q86WK7 504 aa14.54□□□□□ -0.08
MSH5-212ENST00000467319 ZNF496Q96IT1 587 aaPredicted RBP14.54□□□□□ -0.08
MSH5-212ENST00000467319 KCNQ3O43525 872 aa14.53□□□□□ -0.08
MSH5-212ENST00000467319 TTC5Q8N0Z6 440 aa14.53□□□□□ -0.08
MSH5-212ENST00000467319 PDGFDQ9GZP0 370 aaPredicted RBP14.53□□□□□ -0.08
MSH5-212ENST00000467319 RC3H1Q5TC82 1133 aaKnown RBP14.52□□□□□ -0.09
MSH5-212ENST00000467319 BABAM1Q9NWV8 329 aa14.52□□□□□ -0.09
MSH5-212ENST00000467319 NEUROD2Q15784 382 aa14.51□□□□□ -0.09
MSH5-212ENST00000467319 CCDC27Q2M243 656 aa14.51□□□□□ -0.09
MSH5-212ENST00000467319 DNAJC10Q8IXB1 793 aa14.51□□□□□ -0.09
MSH5-212ENST00000467319 AK7Q96M32 723 aa14.51□□□□□ -0.09
MSH5-212ENST00000467319 FMNL2Q96PY5 1086 aa14.51□□□□□ -0.09
MSH5-212ENST00000467319 CYP19A1P11511 503 aaPredicted RBP14.5□□□□□ -0.09
MSH5-212ENST00000467319 SSFA2P28290 1259 aa14.5□□□□□ -0.09
MSH5-212ENST00000467319 CRKLP46109 303 aaKnown RBP14.5□□□□□ -0.09
MSH5-212ENST00000467319 MIER1Q8N108 512 aa14.5□□□□□ -0.09
MSH5-212ENST00000467319 TFCP2L1Q9NZI6 479 aa14.5□□□□□ -0.09
MSH5-212ENST00000467319 SCN7AQ01118 1682 aa14.49□□□□□ -0.09
MSH5-212ENST00000467319 CHL1O00533 1208 aa14.49□□□□□ -0.09
MSH5-212ENST00000467319 GNPATO15228 680 aa14.49□□□□□ -0.09
MSH5-212ENST00000467319 INTS5Q6P9B9 1019 aaKnown RBP14.49□□□□□ -0.09
MSH5-212ENST00000467319 FAM9BQ8IZU0 186 aa14.49□□□□□ -0.09
MSH5-212ENST00000467319 MIS18AQ9NYP9 233 aa14.49□□□□□ -0.09
MSH5-212ENST00000467319 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.48□□□□□ -0.09
MSH5-212ENST00000467319 ZNF853P0CG23 659 aa14.48□□□□□ -0.09
MSH5-212ENST00000467319 EIF4A1P60842 406 aaKnown RBP14.48□□□□□ -0.09
MSH5-212ENST00000467319 CCDC87Q9NVE4 849 aa14.48□□□□□ -0.09
MSH5-212ENST00000467319 TSPYL4Q9UJ04 414 aa14.48□□□□□ -0.09
MSH5-212ENST00000467319 SOS1Q07889 1333 aaPredicted RBP14.47□□□□□ -0.09
MSH5-212ENST00000467319 RPS6KA4O75676 772 aa14.47□□□□□ -0.09
MSH5-212ENST00000467319 ADRA2BP18089 450 aa14.47□□□□□ -0.09
MSH5-212ENST00000467319 COL23A1Q86Y22 540 aaPredicted RBP14.47□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms