RNA–Protein interactions for RNA: ENST00000467213.5

CHD1L-205, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

TSL 1 (best)

Gene CHD1L, Length 2,782 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-205ENST00000467213 CRB1P82279 1406 aa18.86■□□□□ 0.61
CHD1L-205ENST00000467213 TPM3P06753 285 aa18.85■□□□□ 0.61
CHD1L-205ENST00000467213 RPAP1Q9BWH6 1393 aaPredicted RBP18.85■□□□□ 0.61
CHD1L-205ENST00000467213 SOS1Q07889 1333 aaPredicted RBP18.85■□□□□ 0.61
CHD1L-205ENST00000467213 CCDC183Q5T5S1 534 aa18.85■□□□□ 0.61
CHD1L-205ENST00000467213 MEIS3Q99687 375 aa18.85■□□□□ 0.61
CHD1L-205ENST00000467213 TECPR2O15040 1411 aa18.84■□□□□ 0.61
CHD1L-205ENST00000467213 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.84■□□□□ 0.612e-7■■■■□ 20.7
CHD1L-205ENST00000467213 COG3Q96JB2 828 aa18.84■□□□□ 0.61
CHD1L-205ENST00000467213 PXDNLA1KZ92 1463 aa18.84■□□□□ 0.61
CHD1L-205ENST00000467213 XRN1Q8IZH2 1706 aaKnown RBP18.84■□□□□ 0.61
CHD1L-205ENST00000467213 CPS1P31327 1500 aa18.84■□□□□ 0.61
CHD1L-205ENST00000467213 SMARCA5O60264 1052 aaPredicted RBP18.83■□□□□ 0.6
CHD1L-205ENST00000467213 PPP6R1Q9UPN7 881 aa18.83■□□□□ 0.6
CHD1L-205ENST00000467213 PTMAP06454 111 aaKnown RBP18.82■□□□□ 0.6
CHD1L-205ENST00000467213 CHMLP26374 656 aa18.82■□□□□ 0.6
CHD1L-205ENST00000467213 WASLO00401 505 aaPredicted RBP18.82■□□□□ 0.6
CHD1L-205ENST00000467213 FKBP5Q13451 457 aaPredicted RBP18.82■□□□□ 0.6
CHD1L-205ENST00000467213 NRXN3Q9Y4C0 1643 aa18.82■□□□□ 0.6
CHD1L-205ENST00000467213 CRYBG1Q9Y4K1 1723 aa18.82■□□□□ 0.6
CHD1L-205ENST00000467213 NPM1P06748 294 aaKnown RBP eCLIP18.81■□□□□ 0.6
CHD1L-205ENST00000467213 LRRC37A3O60309 1634 aa18.81■□□□□ 0.6
CHD1L-205ENST00000467213 FAM208AQ9UK61 1670 aaKnown RBP18.81■□□□□ 0.6
CHD1L-205ENST00000467213 GNAI2P04899 355 aa18.81■□□□□ 0.6
CHD1L-205ENST00000467213 MX1P20591 662 aa18.81■□□□□ 0.6
CHD1L-205ENST00000467213 NOLC1Q14978 699 aaKnown RBP eCLIP18.81■□□□□ 0.64e-7■■■■□ 25.6
CHD1L-205ENST00000467213 FAM83GA6ND36 823 aa18.81■□□□□ 0.6
CHD1L-205ENST00000467213 LRRCC1Q9C099 1032 aa18.81■□□□□ 0.6
CHD1L-205ENST00000467213 A2ML1A8K2U0 1454 aa18.81■□□□□ 0.6
CHD1L-205ENST00000467213 PDIA4P13667 645 aaKnown RBP18.8■□□□□ 0.6
CHD1L-205ENST00000467213 GNAI3P08754 354 aa18.79■□□□□ 0.6
CHD1L-205ENST00000467213 HSPA4P34932 840 aa18.79■□□□□ 0.6
CHD1L-205ENST00000467213 UBE2HP62256 183 aa18.79■□□□□ 0.6
CHD1L-205ENST00000467213 USP48Q86UV5 1035 aa18.79■□□□□ 0.6
CHD1L-205ENST00000467213 NME9Q86XW9 330 aa18.79■□□□□ 0.6
CHD1L-205ENST00000467213 TOPAZ1Q8N9V7 1692 aa18.79■□□□□ 0.6
CHD1L-205ENST00000467213 TCHHQ07283 1943 aa18.79■□□□□ 0.6
CHD1L-205ENST00000467213 DMTNQ08495 405 aa18.78■□□□□ 0.6
CHD1L-205ENST00000467213 USP25Q9UHP3 1055 aa18.78■□□□□ 0.6
CHD1L-205ENST00000467213 ATP6V1DQ9Y5K8 247 aa18.78■□□□□ 0.6
CHD1L-205ENST00000467213 AGLP35573 1532 aa18.78■□□□□ 0.6
CHD1L-205ENST00000467213 ATP8B2P98198 1209 aa18.78■□□□□ 0.6
CHD1L-205ENST00000467213 RNF214Q8ND24 703 aa18.78■□□□□ 0.6
CHD1L-205ENST00000467213 TTC21BQ7Z4L5 1316 aa18.78■□□□□ 0.6
CHD1L-205ENST00000467213 OVOS2A0A0J9YW53 1432 aa18.77■□□□□ 0.6
CHD1L-205ENST00000467213 OVOS2Q6IE36 1432 aa18.77■□□□□ 0.6
CHD1L-205ENST00000467213 FBLN1P23142 703 aa18.77■□□□□ 0.6
CHD1L-205ENST00000467213 GTPBP4Q9BZE4 634 aaKnown RBP18.77■□□□□ 0.6
CHD1L-205ENST00000467213 FMN2Q9NZ56 1722 aa18.77■□□□□ 0.59
CHD1L-205ENST00000467213 FUCA2Q9BTY2 467 aa18.76■□□□□ 0.59
CHD1L-205ENST00000467213 PALD1Q9ULE6 856 aa18.76■□□□□ 0.59
CHD1L-205ENST00000467213 CCDC61Q9Y6R9 512 aa18.76■□□□□ 0.59
CHD1L-205ENST00000467213 KDM4AO75164 1064 aa18.76■□□□□ 0.59
CHD1L-205ENST00000467213 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.76■□□□□ 0.59
CHD1L-205ENST00000467213 CHD2O14647 1828 aaKnown RBP18.76■□□□□ 0.59
CHD1L-205ENST00000467213 SLC4A2P04920 1241 aa18.76■□□□□ 0.59
CHD1L-205ENST00000467213 DCTN1Q14203 1278 aa18.75■□□□□ 0.59
CHD1L-205ENST00000467213 EIF4A2Q14240 407 aaKnown RBP18.75■□□□□ 0.59
CHD1L-205ENST00000467213 USP31Q70CQ4 1352 aa18.75■□□□□ 0.59
CHD1L-205ENST00000467213 PEAK1Q9H792 1746 aa18.75■□□□□ 0.59
CHD1L-205ENST00000467213 ZSCAN22P10073 491 aaPredicted RBP18.75■□□□□ 0.59
CHD1L-205ENST00000467213 KIF3AQ9Y496 699 aa18.75■□□□□ 0.59
CHD1L-205ENST00000467213 DIAPH3Q9NSV4 1193 aa18.74■□□□□ 0.59
CHD1L-205ENST00000467213 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.74■□□□□ 0.59
CHD1L-205ENST00000467213 HTATSF1O43719 755 aaKnown RBP18.74■□□□□ 0.59
CHD1L-205ENST00000467213 GADD45BO75293 160 aaPredicted RBP18.74■□□□□ 0.59
CHD1L-205ENST00000467213 ADCY5O95622 1261 aa18.74■□□□□ 0.59
CHD1L-205ENST00000467213 TTC14Q96N46 770 aa18.74■□□□□ 0.59
CHD1L-205ENST00000467213 SYCP1Q15431 976 aa18.73■□□□□ 0.59
CHD1L-205ENST00000467213 RAB11FIP3O75154 756 aa18.73■□□□□ 0.59
CHD1L-205ENST00000467213 KRT24Q2M2I5 525 aa18.73■□□□□ 0.59
CHD1L-205ENST00000467213 ZNF710Q8N1W2 664 aa18.73■□□□□ 0.59
CHD1L-205ENST00000467213 ANO2Q9NQ90 1003 aa18.73■□□□□ 0.59
CHD1L-205ENST00000467213 BABAM1Q9NWV8 329 aa18.73■□□□□ 0.59
CHD1L-205ENST00000467213 RAD50Q92878 1312 aa18.72■□□□□ 0.59
CHD1L-205ENST00000467213 NUDT16Q96DE0 195 aaKnown RBP18.72■□□□□ 0.59
CHD1L-205ENST00000467213 CHAMP1Q96JM3 812 aa18.72■□□□□ 0.59
CHD1L-205ENST00000467213 KDRP35968 1356 aa18.72■□□□□ 0.59
CHD1L-205ENST00000467213 ZSCAN20P17040 1043 aaPredicted RBP18.72■□□□□ 0.59
CHD1L-205ENST00000467213 KIAA1524Q8TCG1 905 aa18.72■□□□□ 0.59
CHD1L-205ENST00000467213 DNTTIP2Q5QJE6 756 aaKnown RBP18.71■□□□□ 0.59
CHD1L-205ENST00000467213 SULT6B1Q6IMI4 303 aa18.71■□□□□ 0.59
CHD1L-205ENST00000467213 WAPLQ7Z5K2 1190 aa18.71■□□□□ 0.59
CHD1L-205ENST00000467213 GOLGA6L6A8MZA4 724 aa18.7■□□□□ 0.58
CHD1L-205ENST00000467213 CTIFO43310 598 aaKnown RBP18.7■□□□□ 0.58
CHD1L-205ENST00000467213 KIF20AO95235 890 aa18.7■□□□□ 0.58
CHD1L-205ENST00000467213 RAPGEF3O95398 923 aa18.7■□□□□ 0.58
CHD1L-205ENST00000467213 RRS1Q15050 365 aaKnown RBP18.7■□□□□ 0.58
CHD1L-205ENST00000467213 ANKRD7Q92527 254 aa18.7■□□□□ 0.58
CHD1L-205ENST00000467213 LIMCH1Q9UPQ0 1083 aa18.7■□□□□ 0.58
CHD1L-205ENST00000467213 CCDC171Q6TFL3 1326 aa18.69■□□□□ 0.58
CHD1L-205ENST00000467213 AEBP1Q8IUX7 1158 aa18.69■□□□□ 0.58
CHD1L-205ENST00000467213 USP42Q9H9J4 1324 aaKnown RBP18.69■□□□□ 0.58
CHD1L-205ENST00000467213 STX6O43752 255 aa18.69■□□□□ 0.58
CHD1L-205ENST00000467213 F13A1P00488 732 aa18.69■□□□□ 0.58
CHD1L-205ENST00000467213 APBB1O00213 710 aa18.68■□□□□ 0.58
CHD1L-205ENST00000467213 SGSM2O43147 1006 aa18.68■□□□□ 0.58
CHD1L-205ENST00000467213 SSH3Q8TE77 659 aa18.68■□□□□ 0.58
CHD1L-205ENST00000467213 FOXD4L5Q5VV16 416 aaPredicted RBP18.68■□□□□ 0.58
CHD1L-205ENST00000467213 FOXD4L4Q8WXT5 416 aaPredicted RBP18.68■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms