RNA–Protein interactions for RNA: ENST00000466982.1

SFXN3-204, Transcript of sideroflexin 3, humanhuman

TSL 2

Gene SFXN3, Length 2,756 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN3-204ENST00000466982 CT47A1Q5JQC4 288 aaPredicted RBP13.28□□□□□ -0.28
SFXN3-204ENST00000466982 IL16Q14005 1332 aa13.28□□□□□ -0.28
SFXN3-204ENST00000466982 TRPM2O94759 1503 aa13.28□□□□□ -0.28
SFXN3-204ENST00000466982 KDM4AO75164 1064 aa13.27□□□□□ -0.28
SFXN3-204ENST00000466982 UVSSAQ2YD98 709 aa13.27□□□□□ -0.28
SFXN3-204ENST00000466982 DIAPH3Q9NSV4 1193 aa13.27□□□□□ -0.28
SFXN3-204ENST00000466982 UGGT1Q9NYU2 1555 aa13.27□□□□□ -0.28
SFXN3-204ENST00000466982 ABCA6Q8N139 1617 aa13.27□□□□□ -0.29
SFXN3-204ENST00000466982 KIF3BO15066 747 aa13.27□□□□□ -0.29
SFXN3-204ENST00000466982 TNNT3P45378 269 aaPredicted RBP13.27□□□□□ -0.29
SFXN3-204ENST00000466982 NBPF20Q3BBV1 942 aa13.27□□□□□ -0.29
SFXN3-204ENST00000466982 DCTPP1Q9H773 170 aa13.27□□□□□ -0.29
SFXN3-204ENST00000466982 CEP83Q9Y592 693 aa13.27□□□□□ -0.29
SFXN3-204ENST00000466982 INO80Q9ULG1 1556 aaPredicted RBP13.27□□□□□ -0.29
SFXN3-204ENST00000466982 MLH3Q9UHC1 1453 aa13.27□□□□□ -0.29
SFXN3-204ENST00000466982 CHAF1AQ13111 956 aaPredicted RBP13.26□□□□□ -0.29
SFXN3-204ENST00000466982 FAM184AQ8NB25 1140 aa13.26□□□□□ -0.29
SFXN3-204ENST00000466982 CTNNA3Q9UI47 895 aa13.26□□□□□ -0.29
SFXN3-204ENST00000466982 PALD1Q9ULE6 856 aa13.26□□□□□ -0.29
SFXN3-204ENST00000466982 YEATS2Q9ULM3 1422 aa13.26□□□□□ -0.29
SFXN3-204ENST00000466982 RICTORQ6R327 1708 aa13.26□□□□□ -0.29
SFXN3-204ENST00000466982 KIDINS220Q9ULH0 1771 aa13.26□□□□□ -0.29
SFXN3-204ENST00000466982 NOP2P46087 812 aaKnown RBP13.26□□□□□ -0.29
SFXN3-204ENST00000466982 NCAPGQ9BPX3 1015 aa13.26□□□□□ -0.29
SFXN3-204ENST00000466982 DTNBO60941 627 aa13.26□□□□□ -0.29
SFXN3-204ENST00000466982 GTF2A1P52655 376 aaPredicted RBP13.26□□□□□ -0.29
SFXN3-204ENST00000466982 FRMPD1Q5SYB0 1578 aa13.25□□□□□ -0.29
SFXN3-204ENST00000466982 HECW2Q9P2P5 1572 aa13.25□□□□□ -0.29
SFXN3-204ENST00000466982 TERF2Q15554 542 aa13.25□□□□□ -0.29
SFXN3-204ENST00000466982 GIMAP6Q6P9H5 292 aa13.25□□□□□ -0.29
SFXN3-204ENST00000466982 TAOK2Q9UL54 1235 aa13.25□□□□□ -0.29
SFXN3-204ENST00000466982 CNPY2Q9Y2B0 182 aa13.25□□□□□ -0.29
SFXN3-204ENST00000466982 REC8O95072 547 aa13.24□□□□□ -0.29
SFXN3-204ENST00000466982 HSP90AB3PQ58FF7 597 aa13.24□□□□□ -0.29
SFXN3-204ENST00000466982 CASC1Q6TDU7 716 aa13.24□□□□□ -0.29
SFXN3-204ENST00000466982 UPF3BQ9BZI7 483 aaKnown RBP13.24□□□□□ -0.29
SFXN3-204ENST00000466982 ABCC4O15439 1325 aa13.24□□□□□ -0.29
SFXN3-204ENST00000466982 ANKRD36BQ8N2N9 1353 aa13.24□□□□□ -0.29
SFXN3-204ENST00000466982 SBNO2Q9Y2G9 1366 aa13.24□□□□□ -0.29
SFXN3-204ENST00000466982 ERC2O15083 957 aa13.24□□□□□ -0.29
SFXN3-204ENST00000466982 CLSTN1O94985 981 aa13.24□□□□□ -0.29
SFXN3-204ENST00000466982 TSHZ3Q63HK5 1081 aa13.24□□□□□ -0.29
SFXN3-204ENST00000466982 CABP2Q9NPB3 220 aa13.24□□□□□ -0.29
SFXN3-204ENST00000466982 IRF6O14896 467 aa13.23□□□□□ -0.29
SFXN3-204ENST00000466982 CCDC172P0C7W6 258 aa13.23□□□□□ -0.29
SFXN3-204ENST00000466982 SATB1Q01826 763 aa13.23□□□□□ -0.29
SFXN3-204ENST00000466982 CUL4AQ13619 759 aa13.23□□□□□ -0.29
SFXN3-204ENST00000466982 CCDC183Q5T5S1 534 aa13.23□□□□□ -0.29
SFXN3-204ENST00000466982 C16orf45Q96MC5 204 aaPredicted RBP13.23□□□□□ -0.29
SFXN3-204ENST00000466982 PIK3R4Q99570 1358 aa13.23□□□□□ -0.29
SFXN3-204ENST00000466982 CHGAP10645 457 aaKnown RBP13.23□□□□□ -0.29
SFXN3-204ENST00000466982 GGT6Q6P531 493 aa13.23□□□□□ -0.29
SFXN3-204ENST00000466982 KNDC1Q76NI1 1749 aa13.23□□□□□ -0.29
SFXN3-204ENST00000466982 KIAA1210Q9ULL0 1709 aa13.23□□□□□ -0.29
SFXN3-204ENST00000466982 MX1P20591 662 aa13.22□□□□□ -0.29
SFXN3-204ENST00000466982 FBLN1P23142 703 aa13.22□□□□□ -0.29
SFXN3-204ENST00000466982 PTGS1P23219 599 aa13.22□□□□□ -0.29
SFXN3-204ENST00000466982 SAFB2Q14151 953 aaKnown RBP eCLIP13.22□□□□□ -0.29
SFXN3-204ENST00000466982 ARHGAP45Q92619 1136 aa13.22□□□□□ -0.29
SFXN3-204ENST00000466982 SRCIN1Q9C0H9 1055 aa13.22□□□□□ -0.29
SFXN3-204ENST00000466982 RSPH14Q9UHP6 348 aa13.22□□□□□ -0.29
SFXN3-204ENST00000466982 LRMPQ12912 555 aa13.22□□□□□ -0.29
SFXN3-204ENST00000466982 DDX41Q9UJV9 622 aaKnown RBP13.22□□□□□ -0.29
SFXN3-204ENST00000466982 SH3BP1Q9Y3L3 701 aa13.22□□□□□ -0.29
SFXN3-204ENST00000466982 PTCH1Q13635 1447 aa13.22□□□□□ -0.29
SFXN3-204ENST00000466982 ERICH4A6NGS2 130 aa13.21□□□□□ -0.29
SFXN3-204ENST00000466982 KRT24Q2M2I5 525 aa13.21□□□□□ -0.29
SFXN3-204ENST00000466982 ZNF592Q92610 1267 aa13.21□□□□□ -0.29
SFXN3-204ENST00000466982 SENP3Q9H4L4 574 aaPredicted RBP13.21□□□□□ -0.29
SFXN3-204ENST00000466982 CTR9Q6PD62 1173 aa13.21□□□□□ -0.29
SFXN3-204ENST00000466982 PHACTR3Q96KR7 559 aa13.21□□□□□ -0.29
SFXN3-204ENST00000466982 DHX16O60231 1041 aaKnown RBP13.2□□□□□ -0.3
SFXN3-204ENST00000466982 PRKAR2BP31323 418 aa13.2□□□□□ -0.3
SFXN3-204ENST00000466982 C8orf58Q8NAV2 365 aa13.2□□□□□ -0.3
SFXN3-204ENST00000466982 CFAP44Q96MT7 982 aa13.2□□□□□ -0.3
SFXN3-204ENST00000466982 LARP6Q9BRS8 491 aaKnown RBP13.2□□□□□ -0.3
SFXN3-204ENST00000466982 TRERF1Q96PN7 1200 aa13.2□□□□□ -0.3
SFXN3-204ENST00000466982 FUCA2Q9BTY2 467 aa13.2□□□□□ -0.3
SFXN3-204ENST00000466982 ST7Q9NRC1 585 aa13.2□□□□□ -0.3
SFXN3-204ENST00000466982 FIBPO43427 364 aa13.2□□□□□ -0.3
SFXN3-204ENST00000466982 MBIPQ9NS73 344 aa13.2□□□□□ -0.3
SFXN3-204ENST00000466982 REREQ9P2R6 1566 aa13.19□□□□□ -0.3
SFXN3-204ENST00000466982 DIAPH1O60610 1272 aaKnown RBP13.19□□□□□ -0.3
SFXN3-204ENST00000466982 ICE2Q659A1 982 aa13.19□□□□□ -0.3
SFXN3-204ENST00000466982 NRBP1Q9UHY1 535 aa13.19□□□□□ -0.3
SFXN3-204ENST00000466982 COL3A1P02461 1466 aaPredicted RBP13.19□□□□□ -0.3
SFXN3-204ENST00000466982 DIP2CQ9Y2E4 1556 aa13.19□□□□□ -0.3
SFXN3-204ENST00000466982 HMOX1P09601 288 aa13.19□□□□□ -0.3
SFXN3-204ENST00000466982 TWISTNBQ3B726 338 aaPredicted RBP13.19□□□□□ -0.3
SFXN3-204ENST00000466982 KIF18AQ8NI77 898 aa13.19□□□□□ -0.3
SFXN3-204ENST00000466982 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.19□□□□□ -0.3
SFXN3-204ENST00000466982 V9GYY5 206 aaPredicted RBP13.19□□□□□ -0.3
SFXN3-204ENST00000466982 CFAP65Q6ZU64 1925 aaKnown RBP13.18□□□□□ -0.3
SFXN3-204ENST00000466982 ANKRD44Q8N8A2 993 aa13.18□□□□□ -0.3
SFXN3-204ENST00000466982 INTS4Q96HW7 963 aaKnown RBP13.18□□□□□ -0.3
SFXN3-204ENST00000466982 MORC2Q9Y6X9 1032 aaPredicted RBP13.18□□□□□ -0.3
SFXN3-204ENST00000466982 CEP85Q6P2H3 762 aa13.18□□□□□ -0.3
SFXN3-204ENST00000466982 BRMS1Q9HCU9 246 aa13.18□□□□□ -0.3
SFXN3-204ENST00000466982 WDR33Q9C0J8 1336 aaKnown RBP13.18□□□□□ -0.3
SFXN3-204ENST00000466982 NUTM2DQ5VT03 806 aaPredicted RBP13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms