RNA–Protein interactions for RNA: ENST00000466959.1

PDCD11-202, Transcript of programmed cell death 11, humanhuman

TSL 2

Gene PDCD11, Length 500 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD11-202ENST00000466959 DCTN1Q14203 1278 aa17.36■□□□□ 0.37
PDCD11-202ENST00000466959 IL17REQ8NFR9 667 aa17.36■□□□□ 0.37
PDCD11-202ENST00000466959 LGR6Q9HBX8 967 aa17.36■□□□□ 0.37
PDCD11-202ENST00000466959 TRIM37O94972 964 aa17.35■□□□□ 0.37
PDCD11-202ENST00000466959 APBA3O96018 575 aa17.35■□□□□ 0.37
PDCD11-202ENST00000466959 CALD1Q05682 793 aaKnown RBP17.35■□□□□ 0.37
PDCD11-202ENST00000466959 WDR63Q8IWG1 891 aa17.35■□□□□ 0.37
PDCD11-202ENST00000466959 THUMPD2Q9BTF0 503 aaKnown RBP17.35■□□□□ 0.37
PDCD11-202ENST00000466959 BCL9O00512 1426 aa17.35■□□□□ 0.37
PDCD11-202ENST00000466959 SBF2Q86WG5 1849 aa17.35■□□□□ 0.37
PDCD11-202ENST00000466959 CAMKK2Q96RR4 588 aa17.34■□□□□ 0.37
PDCD11-202ENST00000466959 NHSQ6T4R5 1651 aa17.33■□□□□ 0.37
PDCD11-202ENST00000466959 IL16Q14005 1332 aa17.33■□□□□ 0.36
PDCD11-202ENST00000466959 ERVV-2B6SEH9 535 aa17.33■□□□□ 0.36
PDCD11-202ENST00000466959 TEFQ10587 303 aa17.32■□□□□ 0.36
PDCD11-202ENST00000466959 SPON1Q9HCB6 807 aa17.32■□□□□ 0.36
PDCD11-202ENST00000466959 KDM3BQ7LBC6 1761 aa17.32■□□□□ 0.36
PDCD11-202ENST00000466959 KAT6BQ8WYB5 2073 aa17.32■□□□□ 0.36
PDCD11-202ENST00000466959 GOLGA2Q08379 1002 aa17.31■□□□□ 0.36
PDCD11-202ENST00000466959 SLC52A2Q9HAB3 445 aa17.31■□□□□ 0.36
PDCD11-202ENST00000466959 TNS1Q9HBL0 1735 aaKnown RBP17.3■□□□□ 0.36
PDCD11-202ENST00000466959 PAPPAQ13219 1627 aa17.3■□□□□ 0.36
PDCD11-202ENST00000466959 CABP4P57796 275 aa17.3■□□□□ 0.36
PDCD11-202ENST00000466959 TAF7Q15545 349 aaPredicted RBP17.29■□□□□ 0.36
PDCD11-202ENST00000466959 IFT57Q9NWB7 429 aa17.29■□□□□ 0.36
PDCD11-202ENST00000466959 ZNF853P0CG23 659 aa17.28■□□□□ 0.36
PDCD11-202ENST00000466959 GNAI1P63096 354 aa17.28■□□□□ 0.36
PDCD11-202ENST00000466959 CFAP44Q96MT7 982 aa17.28■□□□□ 0.36
PDCD11-202ENST00000466959 BABAM1Q9NWV8 329 aa17.28■□□□□ 0.36
PDCD11-202ENST00000466959 BTAF1O14981 1849 aa17.27■□□□□ 0.36
PDCD11-202ENST00000466959 E9PSI1 815 aa17.27■□□□□ 0.36
PDCD11-202ENST00000466959 PRIM1P49642 420 aaKnown RBP17.27■□□□□ 0.36
PDCD11-202ENST00000466959 NFATC2IPQ8NCF5 419 aa17.27■□□□□ 0.36
PDCD11-202ENST00000466959 ACSBG1Q96GR2 724 aa17.27■□□□□ 0.36
PDCD11-202ENST00000466959 TMOD3Q9NYL9 352 aa17.27■□□□□ 0.36
PDCD11-202ENST00000466959 UBR2Q8IWV8 1755 aa17.26■□□□□ 0.35
PDCD11-202ENST00000466959 CHL1O00533 1208 aa17.26■□□□□ 0.35
PDCD11-202ENST00000466959 SLFN5Q08AF3 891 aa17.26■□□□□ 0.35
PDCD11-202ENST00000466959 CDCA7LQ96GN5 454 aa17.26■□□□□ 0.35
PDCD11-202ENST00000466959 MYH16Q9H6N6 1097 aa17.26■□□□□ 0.35
PDCD11-202ENST00000466959 SPINK5Q9NQ38 1064 aaPredicted RBP17.26■□□□□ 0.35
PDCD11-202ENST00000466959 LAS1LQ9Y4W2 734 aaKnown RBP17.26■□□□□ 0.35
PDCD11-202ENST00000466959 BTBD11A6QL63 1104 aa17.25■□□□□ 0.35
PDCD11-202ENST00000466959 KCNQ2O43526 872 aa17.25■□□□□ 0.35
PDCD11-202ENST00000466959 SYTL4Q96C24 671 aaPredicted RBP17.25■□□□□ 0.35
PDCD11-202ENST00000466959 TRMT2AQ8IZ69 625 aaKnown RBP17.24■□□□□ 0.35
PDCD11-202ENST00000466959 PIGBQ92521 554 aa17.24■□□□□ 0.35
PDCD11-202ENST00000466959 TSPYL4Q9UJ04 414 aa17.24■□□□□ 0.35
PDCD11-202ENST00000466959 FANCIQ9NVI1 1328 aa17.23■□□□□ 0.35
PDCD11-202ENST00000466959 MBIPQ9NS73 344 aa17.23■□□□□ 0.35
PDCD11-202ENST00000466959 MIS18AQ9NYP9 233 aa17.23■□□□□ 0.35
PDCD11-202ENST00000466959 TSR2Q969E8 191 aaKnown RBP17.22■□□□□ 0.35
PDCD11-202ENST00000466959 KCPQ6ZWJ8 1503 aa17.21■□□□□ 0.35
PDCD11-202ENST00000466959 DUSP27Q5VZP5 1158 aa17.21■□□□□ 0.35
PDCD11-202ENST00000466959 ZNF790Q6PG37 636 aa17.21■□□□□ 0.35
PDCD11-202ENST00000466959 BCL11BQ9C0K0 894 aaPredicted RBP17.21■□□□□ 0.35
PDCD11-202ENST00000466959 SLC39A6Q13433 755 aa17.2■□□□□ 0.34
PDCD11-202ENST00000466959 TTC5Q8N0Z6 440 aa17.2■□□□□ 0.34
PDCD11-202ENST00000466959 RREB1Q92766 1687 aa17.2■□□□□ 0.34
PDCD11-202ENST00000466959 KCNQ3O43525 872 aa17.19■□□□□ 0.34
PDCD11-202ENST00000466959 PTF1AQ7RTS3 328 aa17.19■□□□□ 0.34
PDCD11-202ENST00000466959 ATG3Q9NT62 314 aa17.19■□□□□ 0.34
PDCD11-202ENST00000466959 ASAP1Q9ULH1 1129 aa17.19■□□□□ 0.34
PDCD11-202ENST00000466959 LY75O60449 1722 aa17.18■□□□□ 0.34
PDCD11-202ENST00000466959 C5P01031 1676 aa17.18■□□□□ 0.34
PDCD11-202ENST00000466959 ZNF831Q5JPB2 1677 aa17.18■□□□□ 0.34
PDCD11-202ENST00000466959 EIF4A1P60842 406 aaKnown RBP17.18■□□□□ 0.34
PDCD11-202ENST00000466959 SMARCC1Q92922 1105 aaPredicted RBP17.18■□□□□ 0.34
PDCD11-202ENST00000466959 NUP188Q5SRE5 1749 aa17.18■□□□□ 0.34
PDCD11-202ENST00000466959 CICQ96RK0 1608 aaPredicted RBP17.18■□□□□ 0.34
PDCD11-202ENST00000466959 LAMB4A4D0S4 1761 aa17.17■□□□□ 0.34
PDCD11-202ENST00000466959 PALLDQ8WX93 1383 aa17.16■□□□□ 0.34
PDCD11-202ENST00000466959 HEG1Q9ULI3 1381 aa17.16■□□□□ 0.34
PDCD11-202ENST00000466959 RGPD3A6NKT7 1758 aaPredicted RBP17.16■□□□□ 0.34
PDCD11-202ENST00000466959 RGPD4Q7Z3J3 1758 aa17.16■□□□□ 0.34
PDCD11-202ENST00000466959 EXOSC9Q06265 439 aaKnown RBP17.16■□□□□ 0.34
PDCD11-202ENST00000466959 FMNL2Q96PY5 1086 aa17.16■□□□□ 0.34
PDCD11-202ENST00000466959 TJP1Q07157 1748 aa17.16■□□□□ 0.34
PDCD11-202ENST00000466959 ZNF496Q96IT1 587 aaPredicted RBP17.15■□□□□ 0.34
PDCD11-202ENST00000466959 C8orf58Q8NAV2 365 aa17.14■□□□□ 0.33
PDCD11-202ENST00000466959 ZNF784Q8NCA9 323 aaPredicted RBP17.14■□□□□ 0.33
PDCD11-202ENST00000466959 SOS1Q07889 1333 aaPredicted RBP17.14■□□□□ 0.33
PDCD11-202ENST00000466959 PTCD1O75127 700 aaKnown RBP17.13■□□□□ 0.33
PDCD11-202ENST00000466959 KRT24Q2M2I5 525 aa17.13■□□□□ 0.33
PDCD11-202ENST00000466959 HOXB7P09629 217 aa17.12■□□□□ 0.33
PDCD11-202ENST00000466959 CT47B1P0C2W7 299 aaPredicted RBP17.12■□□□□ 0.33
PDCD11-202ENST00000466959 TWISTNBQ3B726 338 aaPredicted RBP17.12■□□□□ 0.33
PDCD11-202ENST00000466959 VSIG10Q8N0Z9 540 aa17.12■□□□□ 0.33
PDCD11-202ENST00000466959 TSPYL6Q8N831 410 aa17.12■□□□□ 0.33
PDCD11-202ENST00000466959 RBM42Q9BTD8 480 aaKnown RBP17.12■□□□□ 0.33
PDCD11-202ENST00000466959 COL5A3P25940 1745 aaPredicted RBP17.11■□□□□ 0.33
PDCD11-202ENST00000466959 GIGYF1O75420 1035 aaPredicted RBP17.11■□□□□ 0.33
PDCD11-202ENST00000466959 SNRPA1P09661 255 aaKnown RBP17.11■□□□□ 0.33
PDCD11-202ENST00000466959 TAF1LQ8IZX4 1826 aa17.1■□□□□ 0.33
PDCD11-202ENST00000466959 LOC102724428A0A0B4J2F2 783 aa17.1■□□□□ 0.33
PDCD11-202ENST00000466959 ELL2O00472 640 aaPredicted RBP17.1■□□□□ 0.33
PDCD11-202ENST00000466959 SIK1P57059 783 aa17.1■□□□□ 0.33
PDCD11-202ENST00000466959 SLC4A9Q96Q91 983 aa17.1■□□□□ 0.33
PDCD11-202ENST00000466959 PLSCR1O15162 318 aa17.09■□□□□ 0.33
PDCD11-202ENST00000466959 VAMP4O75379 141 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms