RNA–Protein interactions for RNA: ENST00000466912.5

PTPN20-211, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 3

Gene PTPN20, Length 446 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-211ENST00000466912 TMPOP42166 694 aaKnown RBP13.27□□□□□ -0.29
PTPN20-211ENST00000466912 DCTN1Q14203 1278 aa13.27□□□□□ -0.29
PTPN20-211ENST00000466912 SLC27A3Q5K4L6 730 aa13.27□□□□□ -0.29
PTPN20-211ENST00000466912 MCM10Q7L590 875 aa13.27□□□□□ -0.29
PTPN20-211ENST00000466912 SMARCC1Q92922 1105 aaPredicted RBP13.27□□□□□ -0.29
PTPN20-211ENST00000466912 PALLDQ8WX93 1383 aa13.27□□□□□ -0.29
PTPN20-211ENST00000466912 MRC1P22897 1456 aa13.27□□□□□ -0.29
PTPN20-211ENST00000466912 ADAMTS7Q9UKP4 1686 aa13.26□□□□□ -0.29
PTPN20-211ENST00000466912 BTAF1O14981 1849 aa13.25□□□□□ -0.29
PTPN20-211ENST00000466912 CCER2I3L3R5 266 aa13.25□□□□□ -0.29
PTPN20-211ENST00000466912 KCNQ4P56696 695 aa13.25□□□□□ -0.29
PTPN20-211ENST00000466912 RIPK4P57078 832 aa13.25□□□□□ -0.29
PTPN20-211ENST00000466912 RTF1Q92541 710 aaKnown RBP13.25□□□□□ -0.29
PTPN20-211ENST00000466912 RRP7AQ9Y3A4 280 aaKnown RBP13.25□□□□□ -0.29
PTPN20-211ENST00000466912 LOC102724428A0A0B4J2F2 783 aa13.24□□□□□ -0.29
PTPN20-211ENST00000466912 SIK1P57059 783 aa13.24□□□□□ -0.29
PTPN20-211ENST00000466912 SLC39A6Q13433 755 aa13.24□□□□□ -0.29
PTPN20-211ENST00000466912 SLC4A9Q96Q91 983 aa13.24□□□□□ -0.29
PTPN20-211ENST00000466912 ANO8Q9HCE9 1232 aaPredicted RBP13.24□□□□□ -0.29
PTPN20-211ENST00000466912 CCNL1Q9UK58 526 aaPredicted RBP13.24□□□□□ -0.29
PTPN20-211ENST00000466912 KAT6BQ8WYB5 2073 aa13.24□□□□□ -0.29
PTPN20-211ENST00000466912 RGPD3A6NKT7 1758 aaPredicted RBP13.23□□□□□ -0.29
PTPN20-211ENST00000466912 RGPD4Q7Z3J3 1758 aa13.23□□□□□ -0.29
PTPN20-211ENST00000466912 APAF1O14727 1248 aa13.23□□□□□ -0.29
PTPN20-211ENST00000466912 TEFQ10587 303 aa13.23□□□□□ -0.29
PTPN20-211ENST00000466912 MIER1Q8N108 512 aa13.23□□□□□ -0.29
PTPN20-211ENST00000466912 THUMPD2Q9BTF0 503 aaKnown RBP13.23□□□□□ -0.29
PTPN20-211ENST00000466912 TRIM35Q9UPQ4 493 aa13.23□□□□□ -0.29
PTPN20-211ENST00000466912 ITPK1Q13572 414 aa13.22□□□□□ -0.29
PTPN20-211ENST00000466912 AKT1S1Q96B36 256 aa13.22□□□□□ -0.29
PTPN20-211ENST00000466912 ITGB4P16144 1822 aa13.22□□□□□ -0.29
PTPN20-211ENST00000466912 KCNQ3O43525 872 aa13.21□□□□□ -0.29
PTPN20-211ENST00000466912 NEUROD2Q15784 382 aa13.21□□□□□ -0.29
PTPN20-211ENST00000466912 ZNF827Q17R98 1081 aa13.21□□□□□ -0.29
PTPN20-211ENST00000466912 NBPF14Q5TI25 921 aa13.21□□□□□ -0.29
PTPN20-211ENST00000466912 ZNF790Q6PG37 636 aa13.21□□□□□ -0.29
PTPN20-211ENST00000466912 SCN11AQ9UI33 1791 aa13.21□□□□□ -0.29
PTPN20-211ENST00000466912 RREB1Q92766 1687 aa13.21□□□□□ -0.3
PTPN20-211ENST00000466912 BTBD11A6QL63 1104 aa13.2□□□□□ -0.3
PTPN20-211ENST00000466912 PTCD1O75127 700 aaKnown RBP13.2□□□□□ -0.3
PTPN20-211ENST00000466912 ATP6V1AP38606 617 aa13.2□□□□□ -0.3
PTPN20-211ENST00000466912 LMOD3Q0VAK6 560 aa13.2□□□□□ -0.3
PTPN20-211ENST00000466912 TAF7Q15545 349 aaPredicted RBP13.2□□□□□ -0.3
PTPN20-211ENST00000466912 SLC15A2Q16348 729 aa13.2□□□□□ -0.3
PTPN20-211ENST00000466912 FAM9BQ8IZU0 186 aa13.2□□□□□ -0.3
PTPN20-211ENST00000466912 RBM42Q9BTD8 480 aaKnown RBP13.2□□□□□ -0.3
PTPN20-211ENST00000466912 R3HDM1Q15032 1099 aaKnown RBP13.19□□□□□ -0.3
PTPN20-211ENST00000466912 LINC00116Q8NCU8 138 aa13.19□□□□□ -0.3
PTPN20-211ENST00000466912 LY75O60449 1722 aa13.19□□□□□ -0.3
PTPN20-211ENST00000466912 NUP188Q5SRE5 1749 aa13.19□□□□□ -0.3
PTPN20-211ENST00000466912 PAPPAQ13219 1627 aa13.18□□□□□ -0.3
PTPN20-211ENST00000466912 PSDA5PKW4 1024 aaPredicted RBP13.18□□□□□ -0.3
PTPN20-211ENST00000466912 NCBP3Q53F19 620 aaKnown RBP13.18□□□□□ -0.3
PTPN20-211ENST00000466912 ZNF496Q96IT1 587 aaPredicted RBP13.18□□□□□ -0.3
PTPN20-211ENST00000466912 STK32BQ9NY57 414 aa13.18□□□□□ -0.3
PTPN20-211ENST00000466912 MIS18AQ9NYP9 233 aa13.18□□□□□ -0.3
PTPN20-211ENST00000466912 KCPQ6ZWJ8 1503 aa13.18□□□□□ -0.3
PTPN20-211ENST00000466912 TTC5Q8N0Z6 440 aa13.17□□□□□ -0.3
PTPN20-211ENST00000466912 VSIG10Q8N0Z9 540 aa13.17□□□□□ -0.3
PTPN20-211ENST00000466912 SENP3-EIF4A1A0A087X0R7 540 aa13.16□□□□□ -0.3
PTPN20-211ENST00000466912 HMGB2P26583 209 aaKnown RBP13.16□□□□□ -0.3
PTPN20-211ENST00000466912 CCDC27Q2M243 656 aa13.16□□□□□ -0.3
PTPN20-211ENST00000466912 AMIGO3Q86WK7 504 aa13.16□□□□□ -0.3
PTPN20-211ENST00000466912 DNAJC10Q8IXB1 793 aa13.16□□□□□ -0.3
PTPN20-211ENST00000466912 CHL1O00533 1208 aa13.15□□□□□ -0.3
PTPN20-211ENST00000466912 FMNL2Q96PY5 1086 aa13.15□□□□□ -0.3
PTPN20-211ENST00000466912 PDGFDQ9GZP0 370 aaPredicted RBP13.15□□□□□ -0.3
PTPN20-211ENST00000466912 BABAM1Q9NWV8 329 aa13.15□□□□□ -0.3
PTPN20-211ENST00000466912 HEG1Q9ULI3 1381 aa13.15□□□□□ -0.3
PTPN20-211ENST00000466912 PNPLA7Q6ZV29 1317 aa13.14□□□□□ -0.31
PTPN20-211ENST00000466912 CNTNAP4Q9C0A0 1308 aa13.14□□□□□ -0.31
PTPN20-211ENST00000466912 ZNF853P0CG23 659 aa13.14□□□□□ -0.31
PTPN20-211ENST00000466912 RC3H1Q5TC82 1133 aaKnown RBP13.14□□□□□ -0.31
PTPN20-211ENST00000466912 WWC1Q8IX03 1113 aa13.14□□□□□ -0.31
PTPN20-211ENST00000466912 SIPA1L3O60292 1781 aaPredicted RBP13.13□□□□□ -0.31
PTPN20-211ENST00000466912 PRAMEF22A3QJZ6 481 aa13.13□□□□□ -0.31
PTPN20-211ENST00000466912 CYP19A1P11511 503 aaPredicted RBP13.13□□□□□ -0.31
PTPN20-211ENST00000466912 EIF4A1P60842 406 aaKnown RBP13.13□□□□□ -0.31
PTPN20-211ENST00000466912 INTS5Q6P9B9 1019 aaKnown RBP13.13□□□□□ -0.31
PTPN20-211ENST00000466912 SMIM5Q71RC9 77 aa13.13□□□□□ -0.31
PTPN20-211ENST00000466912 TFCP2L1Q9NZI6 479 aa13.13□□□□□ -0.31
PTPN20-211ENST00000466912 TSPYL4Q9UJ04 414 aa13.13□□□□□ -0.31
PTPN20-211ENST00000466912 SRCAPQ6ZRS2 3230 aa13.13□□□□□ -0.31
PTPN20-211ENST00000466912 DLG5Q8TDM6 1919 aa13.12□□□□□ -0.31
PTPN20-211ENST00000466912 CRKLP46109 303 aaKnown RBP13.12□□□□□ -0.31
PTPN20-211ENST00000466912 COL23A1Q86Y22 540 aaPredicted RBP13.12□□□□□ -0.31
PTPN20-211ENST00000466912 AK7Q96M32 723 aa13.12□□□□□ -0.31
PTPN20-211ENST00000466912 CFAP44Q96MT7 982 aa13.12□□□□□ -0.31
PTPN20-211ENST00000466912 GNPATO15228 680 aa13.11□□□□□ -0.31
PTPN20-211ENST00000466912 GIGYF1O75420 1035 aaPredicted RBP13.11□□□□□ -0.31
PTPN20-211ENST00000466912 SNRPA1P09661 255 aaKnown RBP13.11□□□□□ -0.31
PTPN20-211ENST00000466912 TEX13AQ9BXU3 409 aaPredicted RBP13.11□□□□□ -0.31
PTPN20-211ENST00000466912 IFT57Q9NWB7 429 aa13.11□□□□□ -0.31
PTPN20-211ENST00000466912 USP16Q9Y5T5 823 aa13.11□□□□□ -0.31
PTPN20-211ENST00000466912 ZNF831Q5JPB2 1677 aa13.11□□□□□ -0.31
PTPN20-211ENST00000466912 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.1□□□□□ -0.31
PTPN20-211ENST00000466912 RPS6KA4O75676 772 aa13.1□□□□□ -0.31
PTPN20-211ENST00000466912 STARD3NLO95772 234 aa13.1□□□□□ -0.31
PTPN20-211ENST00000466912 SSFA2P28290 1259 aa13.1□□□□□ -0.31
PTPN20-211ENST00000466912 CALD1Q05682 793 aaKnown RBP13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms