RNA–Protein interactions for RNA: ENST00000466901.5

COPS7B-218, Transcript of COP9 signalosome subunit 7B, humanhuman

TSL 3

Gene COPS7B, Length 598 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-218ENST00000466901 PAPPAQ13219 1627 aa10.42□□□□□ -0.74
COPS7B-218ENST00000466901 ATP6V1AP38606 617 aa10.41□□□□□ -0.74
COPS7B-218ENST00000466901 RBM42Q9BTD8 480 aaKnown RBP10.41□□□□□ -0.74
COPS7B-218ENST00000466901 PNNQ9H307 717 aaKnown RBP10.41□□□□□ -0.74
COPS7B-218ENST00000466901 SLC52A2Q9HAB3 445 aa10.41□□□□□ -0.74
COPS7B-218ENST00000466901 SPON1Q9HCB6 807 aa10.41□□□□□ -0.74
COPS7B-218ENST00000466901 C5P01031 1676 aa10.41□□□□□ -0.74
COPS7B-218ENST00000466901 MAP3K5Q99683 1374 aa10.4□□□□□ -0.74
COPS7B-218ENST00000466901 TAF1LQ8IZX4 1826 aa10.4□□□□□ -0.74
COPS7B-218ENST00000466901 PDGFDQ9GZP0 370 aaPredicted RBP10.4□□□□□ -0.74
COPS7B-218ENST00000466901 LRP5O75197 1615 aa10.4□□□□□ -0.75
COPS7B-218ENST00000466901 PTCD1O75127 700 aaKnown RBP10.39□□□□□ -0.75
COPS7B-218ENST00000466901 ZBTB7AO95365 584 aa10.39□□□□□ -0.75
COPS7B-218ENST00000466901 TEFQ10587 303 aa10.39□□□□□ -0.75
COPS7B-218ENST00000466901 RTF1Q92541 710 aaKnown RBP10.39□□□□□ -0.75
COPS7B-218ENST00000466901 CASZ1Q86V15 1759 aa10.39□□□□□ -0.75
COPS7B-218ENST00000466901 QSER1Q2KHR3 1735 aa10.38□□□□□ -0.75
COPS7B-218ENST00000466901 MSH5O43196 834 aa10.38□□□□□ -0.75
COPS7B-218ENST00000466901 IL17REQ8NFR9 667 aa10.38□□□□□ -0.75
COPS7B-218ENST00000466901 AK7Q96M32 723 aa10.38□□□□□ -0.75
COPS7B-218ENST00000466901 MTFR1LQ9H019 292 aa10.38□□□□□ -0.75
COPS7B-218ENST00000466901 ADAMTS7Q9UKP4 1686 aa10.38□□□□□ -0.75
COPS7B-218ENST00000466901 PNPLA7Q6ZV29 1317 aa10.37□□□□□ -0.75
COPS7B-218ENST00000466901 MAPK8IP3Q9UPT6 1336 aa10.37□□□□□ -0.75
COPS7B-218ENST00000466901 C4BP0C0L5 1744 aa10.37□□□□□ -0.75
COPS7B-218ENST00000466901 ITPK1Q13572 414 aa10.37□□□□□ -0.75
COPS7B-218ENST00000466901 WDR43Q15061 677 aaKnown RBP eCLIP10.37□□□□□ -0.75
COPS7B-218ENST00000466901 LINC00116Q8NCU8 138 aa10.37□□□□□ -0.75
COPS7B-218ENST00000466901 FLAD1Q8NFF5 587 aa10.37□□□□□ -0.75
COPS7B-218ENST00000466901 SLC16A10Q8TF71 515 aa10.37□□□□□ -0.75
COPS7B-218ENST00000466901 PLEKHF1Q96S99 279 aa10.37□□□□□ -0.75
COPS7B-218ENST00000466901 PPP1R1BQ9UD71 204 aaPredicted RBP10.37□□□□□ -0.75
COPS7B-218ENST00000466901 ATF5Q9Y2D1 282 aaPredicted RBP10.37□□□□□ -0.75
COPS7B-218ENST00000466901 TUBGCP6Q96RT7 1819 aa10.37□□□□□ -0.75
COPS7B-218ENST00000466901 MRC1P22897 1456 aa10.36□□□□□ -0.75
COPS7B-218ENST00000466901 HTATSF1O43719 755 aaKnown RBP10.36□□□□□ -0.75
COPS7B-218ENST00000466901 SLC39A6Q13433 755 aa10.36□□□□□ -0.75
COPS7B-218ENST00000466901 TTC5Q8N0Z6 440 aa10.36□□□□□ -0.75
COPS7B-218ENST00000466901 SLC4A9Q96Q91 983 aa10.36□□□□□ -0.75
COPS7B-218ENST00000466901 ZNF831Q5JPB2 1677 aa10.36□□□□□ -0.75
COPS7B-218ENST00000466901 GNPATO15228 680 aa10.35□□□□□ -0.75
COPS7B-218ENST00000466901 ANP32CO43423 234 aa10.35□□□□□ -0.75
COPS7B-218ENST00000466901 NFE2L2Q16236 605 aa10.35□□□□□ -0.75
COPS7B-218ENST00000466901 MCM10Q7L590 875 aa10.35□□□□□ -0.75
COPS7B-218ENST00000466901 COL23A1Q86Y22 540 aaPredicted RBP10.35□□□□□ -0.75
COPS7B-218ENST00000466901 CEMIPQ8WUJ3 1361 aa10.35□□□□□ -0.75
COPS7B-218ENST00000466901 DLG5Q8TDM6 1919 aa10.35□□□□□ -0.75
COPS7B-218ENST00000466901 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.34□□□□□ -0.75
COPS7B-218ENST00000466901 BTBD11A6QL63 1104 aa10.34□□□□□ -0.75
COPS7B-218ENST00000466901 PHF14O94880 888 aa10.34□□□□□ -0.75
COPS7B-218ENST00000466901 SSFA2P28290 1259 aa10.34□□□□□ -0.75
COPS7B-218ENST00000466901 PTGER2P43116 358 aa10.34□□□□□ -0.75
COPS7B-218ENST00000466901 DCTN1Q14203 1278 aa10.34□□□□□ -0.75
COPS7B-218ENST00000466901 RC3H1Q5TC82 1133 aaKnown RBP10.34□□□□□ -0.75
COPS7B-218ENST00000466901 ZNF790Q6PG37 636 aa10.34□□□□□ -0.75
COPS7B-218ENST00000466901 SIPA1L3O60292 1781 aaPredicted RBP10.34□□□□□ -0.75
COPS7B-218ENST00000466901 UBR3Q6ZT12 1888 aa10.34□□□□□ -0.75
COPS7B-218ENST00000466901 POLD1P28340 1107 aa10.33□□□□□ -0.76
COPS7B-218ENST00000466901 VSIG10Q8N0Z9 540 aa10.33□□□□□ -0.76
COPS7B-218ENST00000466901 ADAMTS8Q9UP79 889 aa10.33□□□□□ -0.76
COPS7B-218ENST00000466901 RTCBQ9Y3I0 505 aaKnown RBP10.33□□□□□ -0.76
COPS7B-218ENST00000466901 COL5A3P25940 1745 aaPredicted RBP10.33□□□□□ -0.76
COPS7B-218ENST00000466901 CNTNAP4Q9C0A0 1308 aa10.33□□□□□ -0.76
COPS7B-218ENST00000466901 CRKLP46109 303 aaKnown RBP10.32□□□□□ -0.76
COPS7B-218ENST00000466901 RIPK4P57078 832 aa10.32□□□□□ -0.76
COPS7B-218ENST00000466901 TAF7Q15545 349 aaPredicted RBP10.32□□□□□ -0.76
COPS7B-218ENST00000466901 TRAPPC3LQ5T215 181 aa10.32□□□□□ -0.76
COPS7B-218ENST00000466901 SMIM5Q71RC9 77 aa10.32□□□□□ -0.76
COPS7B-218ENST00000466901 AMIGO3Q86WK7 504 aa10.32□□□□□ -0.76
COPS7B-218ENST00000466901 DNAJC10Q8IXB1 793 aa10.32□□□□□ -0.76
COPS7B-218ENST00000466901 CCDC146Q8IYE0 955 aa10.32□□□□□ -0.76
COPS7B-218ENST00000466901 RUNDC1Q96C34 613 aa10.32□□□□□ -0.76
COPS7B-218ENST00000466901 MYH14Q7Z406 1995 aaKnown RBP10.32□□□□□ -0.76
COPS7B-218ENST00000466901 UBR2Q8IWV8 1755 aa10.31□□□□□ -0.76
COPS7B-218ENST00000466901 TJP1Q07157 1748 aa10.31□□□□□ -0.76
COPS7B-218ENST00000466901 RPS6KA4O75676 772 aa10.31□□□□□ -0.76
COPS7B-218ENST00000466901 ADRA2BP18089 450 aa10.31□□□□□ -0.76
COPS7B-218ENST00000466901 TMPOP42166 694 aaKnown RBP10.31□□□□□ -0.76
COPS7B-218ENST00000466901 ZNF496Q96IT1 587 aaPredicted RBP10.31□□□□□ -0.76
COPS7B-218ENST00000466901 FMNL2Q96PY5 1086 aa10.31□□□□□ -0.76
COPS7B-218ENST00000466901 ARXQ96QS3 562 aa10.31□□□□□ -0.76
COPS7B-218ENST00000466901 SGIP1Q9BQI5 828 aa10.31□□□□□ -0.76
COPS7B-218ENST00000466901 TEX13AQ9BXU3 409 aaPredicted RBP10.31□□□□□ -0.76
COPS7B-218ENST00000466901 KCPQ6ZWJ8 1503 aa10.31□□□□□ -0.76
COPS7B-218ENST00000466901 CICQ96RK0 1608 aaPredicted RBP10.3□□□□□ -0.76
COPS7B-218ENST00000466901 STARD3NLO95772 234 aa10.3□□□□□ -0.76
COPS7B-218ENST00000466901 CYP19A1P11511 503 aaPredicted RBP10.3□□□□□ -0.76
COPS7B-218ENST00000466901 RFC4P35249 363 aa10.3□□□□□ -0.76
COPS7B-218ENST00000466901 LMOD3Q0VAK6 560 aa10.3□□□□□ -0.76
COPS7B-218ENST00000466901 NEUROD2Q15784 382 aa10.3□□□□□ -0.76
COPS7B-218ENST00000466901 MSL1Q68DK7 614 aa10.3□□□□□ -0.76
COPS7B-218ENST00000466901 PNISRQ8TF01 805 aaKnown RBP10.3□□□□□ -0.76
COPS7B-218ENST00000466901 CCDC87Q9NVE4 849 aa10.3□□□□□ -0.76
COPS7B-218ENST00000466901 HEG1Q9ULI3 1381 aa10.29□□□□□ -0.76
COPS7B-218ENST00000466901 KCNQ3O43525 872 aa10.29□□□□□ -0.76
COPS7B-218ENST00000466901 INTS5Q6P9B9 1019 aaKnown RBP10.29□□□□□ -0.76
COPS7B-218ENST00000466901 ARHGEF1Q92888 912 aaKnown RBP10.29□□□□□ -0.76
COPS7B-218ENST00000466901 MIS18AQ9NYP9 233 aa10.29□□□□□ -0.76
COPS7B-218ENST00000466901 RRP7AQ9Y3A4 280 aaKnown RBP10.29□□□□□ -0.76
COPS7B-218ENST00000466901 COL24A1Q17RW2 1714 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms