RNA–Protein interactions for RNA: ENST00000466845.1

LRCH3-212, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 3

Gene LRCH3, Length 662 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-212ENST00000466845 CDC14CA4D256 554 aa8.8□□□□□ -1
LRCH3-212ENST00000466845 F11P03951 625 aa8.8□□□□□ -1
LRCH3-212ENST00000466845 LBRQ14739 615 aaKnown RBP8.8□□□□□ -1
LRCH3-212ENST00000466845 TRIM50Q86XT4 487 aa8.8□□□□□ -1
LRCH3-212ENST00000466845 PPARGC1BQ86YN6 1023 aaKnown RBP8.8□□□□□ -1
LRCH3-212ENST00000466845 GPR161Q8N6U8 529 aaKnown RBP8.8□□□□□ -1
LRCH3-212ENST00000466845 FHDC1Q9C0D6 1143 aaPredicted RBP8.8□□□□□ -1
LRCH3-212ENST00000466845 SUPT5HO00267 1087 aaKnown RBP8.79□□□□□ -1
LRCH3-212ENST00000466845 BACH1O14867 736 aa8.79□□□□□ -1
LRCH3-212ENST00000466845 PDIA4P13667 645 aaKnown RBP8.79□□□□□ -1
LRCH3-212ENST00000466845 HDGFL1Q5TGJ6 251 aa8.79□□□□□ -1
LRCH3-212ENST00000466845 PROSER2Q86WR7 435 aaPredicted RBP8.79□□□□□ -1
LRCH3-212ENST00000466845 PLEKHM2Q8IWE5 1019 aa8.79□□□□□ -1
LRCH3-212ENST00000466845 RHBDD1Q8TEB9 315 aa8.79□□□□□ -1
LRCH3-212ENST00000466845 SLC4A9Q96Q91 983 aa8.79□□□□□ -1
LRCH3-212ENST00000466845 COL25A1Q9BXS0 654 aaPredicted RBP8.79□□□□□ -1
LRCH3-212ENST00000466845 ETNK1Q9HBU6 452 aa8.79□□□□□ -1
LRCH3-212ENST00000466845 GDF10P55107 478 aa8.78□□□□□ -1
LRCH3-212ENST00000466845 FNBP4Q8N3X1 1017 aaPredicted RBP8.78□□□□□ -1
LRCH3-212ENST00000466845 ATP1A2P50993 1020 aa8.77□□□□□ -1.01
LRCH3-212ENST00000466845 SMTNP53814 917 aa8.77□□□□□ -1.01
LRCH3-212ENST00000466845 TLR1Q15399 786 aa8.77□□□□□ -1.01
LRCH3-212ENST00000466845 RIPOR1Q6ZS17 1223 aa8.77□□□□□ -1.01
LRCH3-212ENST00000466845 C1orf216Q8TAB5 229 aa8.77□□□□□ -1.01
LRCH3-212ENST00000466845 CNTNAP3BQ96NU0 1288 aa8.77□□□□□ -1.01
LRCH3-212ENST00000466845 TRERF1Q96PN7 1200 aa8.77□□□□□ -1.01
LRCH3-212ENST00000466845 GAS2L1Q99501 681 aaPredicted RBP8.77□□□□□ -1.01
LRCH3-212ENST00000466845 CNTNAP3Q9BZ76 1288 aa8.77□□□□□ -1.01
LRCH3-212ENST00000466845 PIK3CDO00329 1044 aa8.76□□□□□ -1.01
LRCH3-212ENST00000466845 LORP23490 312 aaPredicted RBP8.76□□□□□ -1.01
LRCH3-212ENST00000466845 SCNN1DP51172 638 aa8.76□□□□□ -1.01
LRCH3-212ENST00000466845 PCDHGA11Q9Y5H2 935 aa8.76□□□□□ -1.01
LRCH3-212ENST00000466845 USP17L5A8MUK1 530 aa8.75□□□□□ -1.01
LRCH3-212ENST00000466845 CDK2AP1O14519 115 aa8.75□□□□□ -1.01
LRCH3-212ENST00000466845 SLURP2P0DP57 97 aa8.75□□□□□ -1.01
LRCH3-212ENST00000466845 CSB-PGBD3P0DP91 1061 aa8.75□□□□□ -1.01
LRCH3-212ENST00000466845 NCOA4Q13772 614 aa8.75□□□□□ -1.01
LRCH3-212ENST00000466845 PGBD3Q8N328 593 aa8.75□□□□□ -1.01
LRCH3-212ENST00000466845 ZNF837Q96EG3 531 aaPredicted RBP8.75□□□□□ -1.01
LRCH3-212ENST00000466845 NIFKQ9BYG3 293 aaKnown RBP8.75□□□□□ -1.01
LRCH3-212ENST00000466845 POM121CA8CG34 1229 aa8.74□□□□□ -1.01
LRCH3-212ENST00000466845 ATP9BO43861 1147 aa8.74□□□□□ -1.01
LRCH3-212ENST00000466845 GTF2IP78347 998 aa8.74□□□□□ -1.01
LRCH3-212ENST00000466845 SRSF11Q05519 484 aaKnown RBP8.74□□□□□ -1.01
LRCH3-212ENST00000466845 MTFR1Q15390 333 aa8.74□□□□□ -1.01
LRCH3-212ENST00000466845 DBN1Q16643 649 aa8.74□□□□□ -1.01
LRCH3-212ENST00000466845 C4orf17Q53FE4 359 aa8.74□□□□□ -1.01
LRCH3-212ENST00000466845 FAM9AQ8IZU1 332 aaPredicted RBP8.74□□□□□ -1.01
LRCH3-212ENST00000466845 CFHR5Q9BXR6 569 aa8.74□□□□□ -1.01
LRCH3-212ENST00000466845 NSFL1CQ9UNZ2 370 aaKnown RBP8.74□□□□□ -1.01
LRCH3-212ENST00000466845 PHF24Q9UPV7 400 aa8.74□□□□□ -1.01
LRCH3-212ENST00000466845 KRT76Q01546 638 aa8.73□□□□□ -1.01
LRCH3-212ENST00000466845 UBE2Q2Q8WVN8 375 aa8.73□□□□□ -1.01
LRCH3-212ENST00000466845 NUCKS1Q9H1E3 243 aaKnown RBP8.73□□□□□ -1.01
LRCH3-212ENST00000466845 CUEDC1Q9NWM3 386 aaPredicted RBP8.73□□□□□ -1.01
LRCH3-212ENST00000466845 A6NJY4 79 aa8.72□□□□□ -1.01
LRCH3-212ENST00000466845 TMEM229AB2RXF0 380 aa8.72□□□□□ -1.01
LRCH3-212ENST00000466845 EFHC2Q5JST6 749 aa8.72□□□□□ -1.01
LRCH3-212ENST00000466845 ADAMTS19Q8TE59 1207 aa8.72□□□□□ -1.01
LRCH3-212ENST00000466845 CLUAP1Q96AJ1 413 aa8.72□□□□□ -1.01
LRCH3-212ENST00000466845 MBIPQ9NS73 344 aa8.72□□□□□ -1.01
LRCH3-212ENST00000466845 PSME1Q06323 249 aa8.71□□□□□ -1.02
LRCH3-212ENST00000466845 RNFT1Q5M7Z0 435 aa8.71□□□□□ -1.02
LRCH3-212ENST00000466845 TBC1D9Q6ZT07 1266 aa8.71□□□□□ -1.02
LRCH3-212ENST00000466845 LARGE2Q8N3Y3 721 aa8.71□□□□□ -1.02
LRCH3-212ENST00000466845 CHMP4AQ9BY43 222 aa8.71□□□□□ -1.02
LRCH3-212ENST00000466845 USP17L3A6NCW0 530 aa8.7□□□□□ -1.02
LRCH3-212ENST00000466845 USP17L4A6NCW7 530 aa8.7□□□□□ -1.02
LRCH3-212ENST00000466845 MSX1P28360 303 aa8.7□□□□□ -1.02
LRCH3-212ENST00000466845 PHKA2P46019 1235 aa8.7□□□□□ -1.02
LRCH3-212ENST00000466845 USP17L2Q6R6M4 530 aa8.7□□□□□ -1.02
LRCH3-212ENST00000466845 USP17L1Q7RTZ2 530 aa8.7□□□□□ -1.02
LRCH3-212ENST00000466845 GLMNQ92990 594 aa8.7□□□□□ -1.02
LRCH3-212ENST00000466845 CRISPLD1Q9H336 500 aa8.7□□□□□ -1.02
LRCH3-212ENST00000466845 RBM19Q9Y4C8 960 aaKnown RBP8.7□□□□□ -1.02
LRCH3-212ENST00000466845 PALM3A6NDB9 673 aaPredicted RBP8.69□□□□□ -1.02
LRCH3-212ENST00000466845 M0R2N6 131 aa8.69□□□□□ -1.02
LRCH3-212ENST00000466845 NBPF1Q3BBV0 1214 aa8.69□□□□□ -1.02
LRCH3-212ENST00000466845 FIGNL1Q6PIW4 674 aa8.69□□□□□ -1.02
LRCH3-212ENST00000466845 GTPBP3Q969Y2 492 aaKnown RBP8.69□□□□□ -1.02
LRCH3-212ENST00000466845 ENAMQ9NRM1 1142 aa8.69□□□□□ -1.02
LRCH3-212ENST00000466845 LRRC4BQ9NT99 713 aa8.69□□□□□ -1.02
LRCH3-212ENST00000466845 ZDHHC3Q9NYG2 299 aa8.69□□□□□ -1.02
LRCH3-212ENST00000466845 NLRP8Q86W28 1048 aa8.68□□□□□ -1.02
LRCH3-212ENST00000466845 CALR3Q96L12 384 aaKnown RBP8.68□□□□□ -1.02
LRCH3-212ENST00000466845 UCN2Q96RP3 112 aa8.68□□□□□ -1.02
LRCH3-212ENST00000466845 MKRN1Q9UHC7 482 aaKnown RBP8.68□□□□□ -1.02
LRCH3-212ENST00000466845 SERTAD1Q9UHV2 236 aa8.68□□□□□ -1.02
LRCH3-212ENST00000466845 ADAMTS2O95450 1211 aa8.67□□□□□ -1.02
LRCH3-212ENST00000466845 TATP17735 454 aaPredicted RBP8.67□□□□□ -1.02
LRCH3-212ENST00000466845 MAP2K3P46734 347 aa8.67□□□□□ -1.02
LRCH3-212ENST00000466845 GAS6Q14393 721 aa8.67□□□□□ -1.02
LRCH3-212ENST00000466845 DEPDC4Q8N2C3 294 aa8.67□□□□□ -1.02
LRCH3-212ENST00000466845 DNAAF2Q9NVR5 837 aaKnown RBP8.67□□□□□ -1.02
LRCH3-212ENST00000466845 ZNF358Q9NW07 568 aa8.67□□□□□ -1.02
LRCH3-212ENST00000466845 SCHIP1Q9P0W5 487 aaPredicted RBP8.67□□□□□ -1.02
LRCH3-212ENST00000466845 IQSEC3Q9UPP2 1182 aaPredicted RBP8.67□□□□□ -1.02
LRCH3-212ENST00000466845 GPC6Q9Y625 555 aaPredicted RBP8.67□□□□□ -1.02
LRCH3-212ENST00000466845 ZBTB7BO15156 539 aaPredicted RBP8.66□□□□□ -1.02
LRCH3-212ENST00000466845 STAU1O95793 577 aaKnown RBP8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms