RNA–Protein interactions for RNA: ENST00000466742.5

ABCF3-206, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 2

Gene ABCF3, Length 2,331 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-206ENST00000466742 AMPHP49418 695 aa19■□□□□ 0.63
ABCF3-206ENST00000466742 COG6Q9Y2V7 657 aa19■□□□□ 0.63
ABCF3-206ENST00000466742 IL16Q14005 1332 aa19■□□□□ 0.63
ABCF3-206ENST00000466742 PHACTR3Q96KR7 559 aa19■□□□□ 0.63
ABCF3-206ENST00000466742 NFE2L2Q16236 605 aa18.99■□□□□ 0.63
ABCF3-206ENST00000466742 CGNQ9P2M7 1197 aaKnown RBP18.99■□□□□ 0.63
ABCF3-206ENST00000466742 KCNH5Q8NCM2 988 aa18.98■□□□□ 0.63
ABCF3-206ENST00000466742 RTL1A6NKG5 1358 aa18.98■□□□□ 0.63
ABCF3-206ENST00000466742 DNTTIP2Q5QJE6 756 aaKnown RBP18.97■□□□□ 0.63
ABCF3-206ENST00000466742 KRT28Q7Z3Y7 464 aa18.97■□□□□ 0.63
ABCF3-206ENST00000466742 ARHGEF10O15013 1369 aa18.97■□□□□ 0.63
ABCF3-206ENST00000466742 HOXC9P31274 260 aa18.97■□□□□ 0.63
ABCF3-206ENST00000466742 ZSCAN23Q3MJ62 389 aa18.97■□□□□ 0.63
ABCF3-206ENST00000466742 PANK1Q8TE04 598 aa18.97■□□□□ 0.63
ABCF3-206ENST00000466742 PCDHB15Q9Y5E8 787 aa18.97■□□□□ 0.63
ABCF3-206ENST00000466742 SULT6B1Q6IMI4 303 aa18.96■□□□□ 0.63
ABCF3-206ENST00000466742 KIAA2012Q0VF49 1180 aa18.96■□□□□ 0.63
ABCF3-206ENST00000466742 RWDD1Q9H446 243 aaPredicted RBP18.96■□□□□ 0.63
ABCF3-206ENST00000466742 ZNF335Q9H4Z2 1342 aaPredicted RBP18.95■□□□□ 0.62
ABCF3-206ENST00000466742 NFAT5O94916 1531 aa18.95■□□□□ 0.62
ABCF3-206ENST00000466742 RGPD1P0DJD0 1748 aa18.95■□□□□ 0.62
ABCF3-206ENST00000466742 ZBTB22O15209 634 aa18.95■□□□□ 0.62
ABCF3-206ENST00000466742 BAG4O95429 457 aaKnown RBP18.95■□□□□ 0.62
ABCF3-206ENST00000466742 IRX5P78411 483 aaPredicted RBP18.95■□□□□ 0.62
ABCF3-206ENST00000466742 AEBP1Q8IUX7 1158 aa18.95■□□□□ 0.62
ABCF3-206ENST00000466742 JARID2Q92833 1246 aaPredicted RBP18.94■□□□□ 0.62
ABCF3-206ENST00000466742 KDRP35968 1356 aa18.94■□□□□ 0.62
ABCF3-206ENST00000466742 CHRM1P11229 460 aaPredicted RBP18.94■□□□□ 0.62
ABCF3-206ENST00000466742 IGSF1Q8N6C5 1336 aa18.93■□□□□ 0.62
ABCF3-206ENST00000466742 TRPM3Q9HCF6 1732 aaPredicted RBP18.93■□□□□ 0.62
ABCF3-206ENST00000466742 SLIT3O75094 1523 aa18.93■□□□□ 0.62
ABCF3-206ENST00000466742 SSFA2P28290 1259 aa18.92■□□□□ 0.62
ABCF3-206ENST00000466742 LMOD3Q0VAK6 560 aa18.92■□□□□ 0.62
ABCF3-206ENST00000466742 TEX2Q8IWB9 1127 aa18.92■□□□□ 0.62
ABCF3-206ENST00000466742 KIF3AQ9Y496 699 aa18.92■□□□□ 0.62
ABCF3-206ENST00000466742 PRIM1P49642 420 aaKnown RBP18.92■□□□□ 0.62
ABCF3-206ENST00000466742 IP6K1Q92551 441 aa18.92■□□□□ 0.62
ABCF3-206ENST00000466742 TSC1Q92574 1164 aa18.92■□□□□ 0.62
ABCF3-206ENST00000466742 NPHP3Q7Z494 1330 aa18.92■□□□□ 0.62
ABCF3-206ENST00000466742 CT47B1P0C2W7 299 aaPredicted RBP18.91■□□□□ 0.62
ABCF3-206ENST00000466742 EYA1Q99502 592 aa18.91■□□□□ 0.62
ABCF3-206ENST00000466742 DNAJC2Q99543 621 aaKnown RBP18.91■□□□□ 0.62
ABCF3-206ENST00000466742 GCP02774 474 aa18.91■□□□□ 0.62
ABCF3-206ENST00000466742 PDCL2Q8N4E4 241 aa18.91■□□□□ 0.62
ABCF3-206ENST00000466742 FEZ1Q99689 392 aa18.91■□□□□ 0.62
ABCF3-206ENST00000466742 CAVIN1Q6NZI2 390 aaKnown RBP18.9■□□□□ 0.62
ABCF3-206ENST00000466742 SPDYE4A6NLX3 237 aa18.9■□□□□ 0.62
ABCF3-206ENST00000466742 ZNF771Q7L3S4 317 aaPredicted RBP18.9■□□□□ 0.62
ABCF3-206ENST00000466742 BCL2L12Q9HB09 334 aa18.89■□□□□ 0.61
ABCF3-206ENST00000466742 XIRP1Q702N8 1843 aaKnown RBP18.89■□□□□ 0.61
ABCF3-206ENST00000466742 GABPB1Q06547 395 aaPredicted RBP18.89■□□□□ 0.61
ABCF3-206ENST00000466742 ARHGEF25Q86VW2 580 aa18.88■□□□□ 0.61
ABCF3-206ENST00000466742 PHRF1Q9P1Y6 1649 aaKnown RBP18.88■□□□□ 0.61
ABCF3-206ENST00000466742 RARSP54136 660 aaKnown RBP18.88■□□□□ 0.61
ABCF3-206ENST00000466742 LMOD2Q6P5Q4 547 aa18.88■□□□□ 0.61
ABCF3-206ENST00000466742 TSR2Q969E8 191 aaKnown RBP18.88■□□□□ 0.61
ABCF3-206ENST00000466742 ZFP91Q96JP5 570 aaPredicted RBP18.88■□□□□ 0.61
ABCF3-206ENST00000466742 LMBRD1Q9NUN5 540 aa18.88■□□□□ 0.61
ABCF3-206ENST00000466742 PIBF1Q8WXW3 757 aa18.87■□□□□ 0.61
ABCF3-206ENST00000466742 ANKRD7Q92527 254 aa18.87■□□□□ 0.61
ABCF3-206ENST00000466742 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP18.87■□□□□ 0.61
ABCF3-206ENST00000466742 K7ELQ4 463 aaPredicted RBP18.86■□□□□ 0.61
ABCF3-206ENST00000466742 ALS2Q96Q42 1657 aa18.86■□□□□ 0.61
ABCF3-206ENST00000466742 LRSAM1Q6UWE0 723 aa18.86■□□□□ 0.61
ABCF3-206ENST00000466742 BRINP3Q76B58 766 aa18.86■□□□□ 0.61
ABCF3-206ENST00000466742 IFT57Q9NWB7 429 aa18.86■□□□□ 0.61
ABCF3-206ENST00000466742 OGFRQ9NZT2 677 aa18.86■□□□□ 0.61
ABCF3-206ENST00000466742 IGSF3O75054 1194 aa18.85■□□□□ 0.61
ABCF3-206ENST00000466742 KCNJ4P48050 445 aa18.85■□□□□ 0.61
ABCF3-206ENST00000466742 PXDNQ92626 1479 aa18.85■□□□□ 0.61
ABCF3-206ENST00000466742 DDX17Q92841 729 aaKnown RBP18.85■□□□□ 0.61
ABCF3-206ENST00000466742 ZNF853P0CG23 659 aa18.84■□□□□ 0.61
ABCF3-206ENST00000466742 GNAI1P63096 354 aa18.84■□□□□ 0.61
ABCF3-206ENST00000466742 IRX3P78415 501 aaPredicted RBP18.84■□□□□ 0.61
ABCF3-206ENST00000466742 EXOSC9Q06265 439 aaKnown RBP18.84■□□□□ 0.61
ABCF3-206ENST00000466742 KIF2CQ99661 725 aa18.84■□□□□ 0.61
ABCF3-206ENST00000466742 SLAIN2Q9P270 581 aa18.84■□□□□ 0.61
ABCF3-206ENST00000466742 TNS3Q68CZ2 1445 aa18.84■□□□□ 0.61
ABCF3-206ENST00000466742 NOLC1Q14978 699 aaKnown RBP eCLIP18.84■□□□□ 0.61
ABCF3-206ENST00000466742 LTN1O94822 1766 aa18.83■□□□□ 0.61
ABCF3-206ENST00000466742 CCDC66A2RUB6 948 aa18.83■□□□□ 0.61
ABCF3-206ENST00000466742 U2AF2P26368 475 aaKnown RBP eCLIP18.83■□□□□ 0.613e-6■■■□□ 15.1
ABCF3-206ENST00000466742 THUMPD2Q9BTF0 503 aaKnown RBP18.83■□□□□ 0.61
ABCF3-206ENST00000466742 SPATA31A3Q5VYP0 1347 aa18.82■□□□□ 0.6
ABCF3-206ENST00000466742 MCTP1Q6DN14 999 aa18.82■□□□□ 0.6
ABCF3-206ENST00000466742 LTV1Q96GA3 475 aaPredicted RBP18.82■□□□□ 0.6
ABCF3-206ENST00000466742 CFAP44Q96MT7 982 aa18.82■□□□□ 0.6
ABCF3-206ENST00000466742 GAS2L2Q8NHY3 880 aa18.82■□□□□ 0.6
ABCF3-206ENST00000466742 SPTLC3Q9NUV7 552 aa18.82■□□□□ 0.6
ABCF3-206ENST00000466742 FAM83GA6ND36 823 aa18.81■□□□□ 0.6
ABCF3-206ENST00000466742 SLFN14P0C7P3 912 aa18.81■□□□□ 0.6
ABCF3-206ENST00000466742 FKBP5Q13451 457 aaPredicted RBP18.81■□□□□ 0.6
ABCF3-206ENST00000466742 MTHFSDQ2M296 383 aaKnown RBP18.81■□□□□ 0.6
ABCF3-206ENST00000466742 RGS22Q8NE09 1264 aa18.81■□□□□ 0.6
ABCF3-206ENST00000466742 FOXD4L1Q9NU39 408 aa18.81■□□□□ 0.6
ABCF3-206ENST00000466742 MED1Q15648 1581 aaPredicted RBP18.81■□□□□ 0.6
ABCF3-206ENST00000466742 CD2BP2O95400 341 aaKnown RBP18.8■□□□□ 0.6
ABCF3-206ENST00000466742 PTMAP06454 111 aaKnown RBP18.8■□□□□ 0.6
ABCF3-206ENST00000466742 RLBP1P12271 317 aa18.8■□□□□ 0.6
ABCF3-206ENST00000466742 TULP2O00295 520 aa18.8■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 212.7 ms