RNA–Protein interactions for RNA: ENST00000466635.1

SYP-203, Transcript of synaptophysin, humanhuman

TSL 4

Gene SYP, Length 513 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYP-203ENST00000466635 BTBD11A6QL63 1104 aa17.6■□□□□ 0.41
SYP-203ENST00000466635 MRC1P22897 1456 aa17.59■□□□□ 0.41
SYP-203ENST00000466635 TTC5Q8N0Z6 440 aa17.59■□□□□ 0.41
SYP-203ENST00000466635 ATG3Q9NT62 314 aa17.59■□□□□ 0.41
SYP-203ENST00000466635 ASAP1Q9ULH1 1129 aa17.59■□□□□ 0.41
SYP-203ENST00000466635 TOGARAM1Q9Y4F4 1720 aa17.58■□□□□ 0.41
SYP-203ENST00000466635 ADAMTS7Q9UKP4 1686 aa17.58■□□□□ 0.41
SYP-203ENST00000466635 EN1Q05925 392 aaPredicted RBP17.58■□□□□ 0.4
SYP-203ENST00000466635 WWC1Q8IX03 1113 aa17.58■□□□□ 0.4
SYP-203ENST00000466635 PALLDQ8WX93 1383 aa17.57■□□□□ 0.4
SYP-203ENST00000466635 SBF2Q86WG5 1849 aa17.57■□□□□ 0.4
SYP-203ENST00000466635 BABAM1Q9NWV8 329 aa17.57■□□□□ 0.4
SYP-203ENST00000466635 SCN11AQ9UI33 1791 aa17.57■□□□□ 0.4
SYP-203ENST00000466635 HMGB2P26583 209 aaKnown RBP17.56■□□□□ 0.4
SYP-203ENST00000466635 ZNF790Q6PG37 636 aa17.56■□□□□ 0.4
SYP-203ENST00000466635 DEFB132Q7Z7B7 95 aa17.56■□□□□ 0.4
SYP-203ENST00000466635 LAS1LQ9Y4W2 734 aaKnown RBP17.56■□□□□ 0.4
SYP-203ENST00000466635 SLC39A6Q13433 755 aa17.55■□□□□ 0.4
SYP-203ENST00000466635 SLC27A3Q5K4L6 730 aa17.55■□□□□ 0.4
SYP-203ENST00000466635 WDR63Q8IWG1 891 aa17.55■□□□□ 0.4
SYP-203ENST00000466635 CAMKK2Q96RR4 588 aa17.55■□□□□ 0.4
SYP-203ENST00000466635 RBM42Q9BTD8 480 aaKnown RBP17.55■□□□□ 0.4
SYP-203ENST00000466635 TSPYL4Q9UJ04 414 aa17.55■□□□□ 0.4
SYP-203ENST00000466635 EP400Q96L91 3159 aa17.54■□□□□ 0.4
SYP-203ENST00000466635 PTCD1O75127 700 aaKnown RBP17.54■□□□□ 0.4
SYP-203ENST00000466635 GNAI1P63096 354 aa17.54■□□□□ 0.4
SYP-203ENST00000466635 HNRNPUQ00839 825 aaKnown RBP eCLIP17.54■□□□□ 0.4
SYP-203ENST00000466635 EZH2Q15910 746 aaKnown RBP17.54■□□□□ 0.4
SYP-203ENST00000466635 TXNRD1Q16881 649 aa17.54■□□□□ 0.4
SYP-203ENST00000466635 CFAP44Q96MT7 982 aa17.54■□□□□ 0.4
SYP-203ENST00000466635 IFT57Q9NWB7 429 aa17.54■□□□□ 0.4
SYP-203ENST00000466635 MIS18AQ9NYP9 233 aa17.54■□□□□ 0.4
SYP-203ENST00000466635 CCNL1Q9UK58 526 aaPredicted RBP17.54■□□□□ 0.4
SYP-203ENST00000466635 KAT6BQ8WYB5 2073 aa17.54■□□□□ 0.4
SYP-203ENST00000466635 IL16Q14005 1332 aa17.53■□□□□ 0.4
SYP-203ENST00000466635 TNS1Q9HBL0 1735 aaKnown RBP17.53■□□□□ 0.4
SYP-203ENST00000466635 LOC102724428A0A0B4J2F2 783 aa17.53■□□□□ 0.4
SYP-203ENST00000466635 SIK1P57059 783 aa17.53■□□□□ 0.4
SYP-203ENST00000466635 BTAF1O14981 1849 aa17.53■□□□□ 0.4
SYP-203ENST00000466635 ITGB4P16144 1822 aa17.53■□□□□ 0.4
SYP-203ENST00000466635 DLG5Q8TDM6 1919 aa17.53■□□□□ 0.4
SYP-203ENST00000466635 CHL1O00533 1208 aa17.52■□□□□ 0.4
SYP-203ENST00000466635 FMNL2Q96PY5 1086 aa17.52■□□□□ 0.4
SYP-203ENST00000466635 ATP6V1AP38606 617 aa17.51■□□□□ 0.39
SYP-203ENST00000466635 KCNQ3O43525 872 aa17.5■□□□□ 0.39
SYP-203ENST00000466635 ZNF853P0CG23 659 aa17.5■□□□□ 0.39
SYP-203ENST00000466635 VSIG10Q8N0Z9 540 aa17.5■□□□□ 0.39
SYP-203ENST00000466635 PROM2Q8N271 834 aa17.5■□□□□ 0.39
SYP-203ENST00000466635 ZNF496Q96IT1 587 aaPredicted RBP17.5■□□□□ 0.39
SYP-203ENST00000466635 GOLGA2Q08379 1002 aa17.49■□□□□ 0.39
SYP-203ENST00000466635 MYH16Q9H6N6 1097 aa17.49■□□□□ 0.39
SYP-203ENST00000466635 ZNF521Q96K83 1311 aa17.48■□□□□ 0.39
SYP-203ENST00000466635 EIF4A1P60842 406 aaKnown RBP17.48■□□□□ 0.39
SYP-203ENST00000466635 TEX13AQ9BXU3 409 aaPredicted RBP17.48■□□□□ 0.39
SYP-203ENST00000466635 MBIPQ9NS73 344 aa17.48■□□□□ 0.39
SYP-203ENST00000466635 LRRC4BQ9NT99 713 aa17.48■□□□□ 0.39
SYP-203ENST00000466635 SNRPA1P09661 255 aaKnown RBP17.47■□□□□ 0.39
SYP-203ENST00000466635 KCNQ4P56696 695 aa17.47■□□□□ 0.39
SYP-203ENST00000466635 NBPF14Q5TI25 921 aa17.47■□□□□ 0.39
SYP-203ENST00000466635 HEG1Q9ULI3 1381 aa17.47■□□□□ 0.39
SYP-203ENST00000466635 SIPA1L3O60292 1781 aaPredicted RBP17.46■□□□□ 0.39
SYP-203ENST00000466635 SLC4A9Q96Q91 983 aa17.46■□□□□ 0.39
SYP-203ENST00000466635 RGPD3A6NKT7 1758 aaPredicted RBP17.45■□□□□ 0.38
SYP-203ENST00000466635 RGPD4Q7Z3J3 1758 aa17.45■□□□□ 0.38
SYP-203ENST00000466635 E9PSI1 815 aa17.45■□□□□ 0.38
SYP-203ENST00000466635 STARD3NLO95772 234 aa17.45■□□□□ 0.38
SYP-203ENST00000466635 ITPK1Q13572 414 aa17.45■□□□□ 0.38
SYP-203ENST00000466635 PAPPAQ13219 1627 aa17.45■□□□□ 0.38
SYP-203ENST00000466635 KCPQ6ZWJ8 1503 aa17.45■□□□□ 0.38
SYP-203ENST00000466635 VIRMAQ69YN4 1812 aaKnown RBP17.44■□□□□ 0.38
SYP-203ENST00000466635 DNAJC10Q8IXB1 793 aa17.44■□□□□ 0.38
SYP-203ENST00000466635 TSR2Q969E8 191 aaKnown RBP17.44■□□□□ 0.38
SYP-203ENST00000466635 STK32BQ9NY57 414 aa17.44■□□□□ 0.38
SYP-203ENST00000466635 GIGYF1O75420 1035 aaPredicted RBP17.43■□□□□ 0.38
SYP-203ENST00000466635 LINC00116Q8NCU8 138 aa17.43■□□□□ 0.38
SYP-203ENST00000466635 ZBED9Q6R2W3 1325 aa17.43■□□□□ 0.38
SYP-203ENST00000466635 LY75O60449 1722 aa17.42■□□□□ 0.38
SYP-203ENST00000466635 RC3H1Q5TC82 1133 aaKnown RBP17.42■□□□□ 0.38
SYP-203ENST00000466635 AK7Q96M32 723 aa17.42■□□□□ 0.38
SYP-203ENST00000466635 SPINK5Q9NQ38 1064 aaPredicted RBP17.42■□□□□ 0.38
SYP-203ENST00000466635 FANCIQ9NVI1 1328 aa17.42■□□□□ 0.38
SYP-203ENST00000466635 CYP19A1P11511 503 aaPredicted RBP17.41■□□□□ 0.38
SYP-203ENST00000466635 SLFN5Q08AF3 891 aa17.41■□□□□ 0.38
SYP-203ENST00000466635 CHMP4AQ9BY43 222 aa17.41■□□□□ 0.38
SYP-203ENST00000466635 HOXB7P09629 217 aa17.4■□□□□ 0.38
SYP-203ENST00000466635 CRKLP46109 303 aaKnown RBP17.4■□□□□ 0.38
SYP-203ENST00000466635 AKT1S1Q96B36 256 aa17.4■□□□□ 0.38
SYP-203ENST00000466635 USP16Q9Y5T5 823 aa17.4■□□□□ 0.38
SYP-203ENST00000466635 SOS1Q07889 1333 aaPredicted RBP17.4■□□□□ 0.38
SYP-203ENST00000466635 CNTNAP4Q9C0A0 1308 aa17.4■□□□□ 0.38
SYP-203ENST00000466635 KDM3BQ7LBC6 1761 aa17.39■□□□□ 0.37
SYP-203ENST00000466635 UBR2Q8IWV8 1755 aa17.39■□□□□ 0.37
SYP-203ENST00000466635 PRAMEF22A3QJZ6 481 aa17.39■□□□□ 0.37
SYP-203ENST00000466635 SLC15A2Q16348 729 aa17.39■□□□□ 0.37
SYP-203ENST00000466635 DUSP27Q5VZP5 1158 aa17.39■□□□□ 0.37
SYP-203ENST00000466635 CDCA7LQ96GN5 454 aa17.39■□□□□ 0.37
SYP-203ENST00000466635 CCDC87Q9NVE4 849 aa17.39■□□□□ 0.37
SYP-203ENST00000466635 TFCP2L1Q9NZI6 479 aa17.39■□□□□ 0.37
SYP-203ENST00000466635 ZNF831Q5JPB2 1677 aa17.39■□□□□ 0.37
SYP-203ENST00000466635 ELL2O00472 640 aaPredicted RBP17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms