RNA–Protein interactions for RNA: ENST00000466618.1

SNED1-208, Transcript of sushi, nidogen and EGF like domains 1, humanhuman

TSL 5

Gene SNED1, Length 2,198 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1-208ENST00000466618 RIPK4P57078 832 aa19.49■□□□□ 0.71
SNED1-208ENST00000466618 TRIM35Q9UPQ4 493 aa19.49■□□□□ 0.71
SNED1-208ENST00000466618 TNS2Q63HR2 1409 aa19.49■□□□□ 0.71
SNED1-208ENST00000466618 EXOC5O00471 708 aa19.49■□□□□ 0.71
SNED1-208ENST00000466618 CCDC27Q2M243 656 aa19.49■□□□□ 0.71
SNED1-208ENST00000466618 ZNF530Q6P9A1 599 aaPredicted RBP19.49■□□□□ 0.71
SNED1-208ENST00000466618 PHKG2P15735 406 aa19.48■□□□□ 0.71
SNED1-208ENST00000466618 AKAP4Q5JQC9 854 aa19.48■□□□□ 0.71
SNED1-208ENST00000466618 PCDH11XQ9BZA7 1347 aa19.48■□□□□ 0.71
SNED1-208ENST00000466618 PCDH11YQ9BZA8 1340 aa19.48■□□□□ 0.71
SNED1-208ENST00000466618 NEUROD2Q15784 382 aa19.47■□□□□ 0.71
SNED1-208ENST00000466618 DDB1Q16531 1140 aa19.47■□□□□ 0.71
SNED1-208ENST00000466618 MAP3K5Q99683 1374 aa19.47■□□□□ 0.71
SNED1-208ENST00000466618 LRRC37A3O60309 1634 aa19.47■□□□□ 0.71
SNED1-208ENST00000466618 GNAT3A8MTJ3 354 aa19.46■□□□□ 0.71
SNED1-208ENST00000466618 HTATSF1O43719 755 aaKnown RBP19.46■□□□□ 0.71
SNED1-208ENST00000466618 CLCN1P35523 988 aa19.46■□□□□ 0.71
SNED1-208ENST00000466618 IFNL2Q8IZJ0 200 aa19.46■□□□□ 0.71
SNED1-208ENST00000466618 NAP1L5Q96NT1 182 aaPredicted RBP19.46■□□□□ 0.71
SNED1-208ENST00000466618 ZNF521Q96K83 1311 aa19.46■□□□□ 0.71
SNED1-208ENST00000466618 SHANK3Q9BYB0 1731 aa19.45■□□□□ 0.7
SNED1-208ENST00000466618 RRP9O43818 475 aaKnown RBP19.45■□□□□ 0.7
SNED1-208ENST00000466618 RXRBP28702 533 aa19.45■□□□□ 0.7
SNED1-208ENST00000466618 NKX1-1Q15270 411 aaPredicted RBP19.45■□□□□ 0.7
SNED1-208ENST00000466618 WWC1Q8IX03 1113 aa19.45■□□□□ 0.7
SNED1-208ENST00000466618 SEPT12Q8IYM1 358 aa19.45■□□□□ 0.7
SNED1-208ENST00000466618 C1orf141Q5JVX7 400 aa19.44■□□□□ 0.7
SNED1-208ENST00000466618 XRCC6P12956 609 aaKnown RBP eCLIP19.44■□□□□ 0.7
SNED1-208ENST00000466618 HSP90AA2PQ14568 343 aaPredicted RBP19.44■□□□□ 0.7
SNED1-208ENST00000466618 DUSP27Q5VZP5 1158 aa19.44■□□□□ 0.7
SNED1-208ENST00000466618 LMOD3Q0VAK6 560 aa19.43■□□□□ 0.7
SNED1-208ENST00000466618 IL17REQ8NFR9 667 aa19.43■□□□□ 0.7
SNED1-208ENST00000466618 DDX54Q8TDD1 881 aaKnown RBP19.43■□□□□ 0.7
SNED1-208ENST00000466618 ANTXR1Q9H6X2 564 aa19.43■□□□□ 0.7
SNED1-208ENST00000466618 FSD2A1L4K1 749 aa19.43■□□□□ 0.7
SNED1-208ENST00000466618 MARCH10Q8NA82 808 aaPredicted RBP19.43■□□□□ 0.7
SNED1-208ENST00000466618 CEMIPQ8WUJ3 1361 aa19.42■□□□□ 0.7
SNED1-208ENST00000466618 SLKQ9H2G2 1235 aaPredicted RBP19.42■□□□□ 0.7
SNED1-208ENST00000466618 KDM6AO15550 1401 aaPredicted RBP19.42■□□□□ 0.7
SNED1-208ENST00000466618 DCTN1Q14203 1278 aa19.42■□□□□ 0.7
SNED1-208ENST00000466618 LGR6Q9HBX8 967 aa19.42■□□□□ 0.7
SNED1-208ENST00000466618 HSP90AA1P07900 732 aaKnown RBP19.41■□□□□ 0.7
SNED1-208ENST00000466618 MPRIPQ6WCQ1 1025 aa19.41■□□□□ 0.7
SNED1-208ENST00000466618 MCM10Q7L590 875 aa19.41■□□□□ 0.7
SNED1-208ENST00000466618 DCAF5Q96JK2 942 aa19.41■□□□□ 0.7
SNED1-208ENST00000466618 ADAMTS7Q9UKP4 1686 aa19.41■□□□□ 0.7
SNED1-208ENST00000466618 SEC24BO95487 1268 aa19.4■□□□□ 0.7
SNED1-208ENST00000466618 HSP90AB1P08238 724 aaKnown RBP19.4■□□□□ 0.7
SNED1-208ENST00000466618 RTF1Q92541 710 aaKnown RBP19.4■□□□□ 0.7
SNED1-208ENST00000466618 A0A0G2JS52 829 aa19.4■□□□□ 0.7
SNED1-208ENST00000466618 RNMTO43148 476 aaKnown RBP19.4■□□□□ 0.7
SNED1-208ENST00000466618 THUMPD2Q9BTF0 503 aaKnown RBP19.4■□□□□ 0.7
SNED1-208ENST00000466618 WDR63Q8IWG1 891 aa19.39■□□□□ 0.69
SNED1-208ENST00000466618 DLG5Q8TDM6 1919 aa19.39■□□□□ 0.69
SNED1-208ENST00000466618 BECN1Q14457 450 aa19.39■□□□□ 0.69
SNED1-208ENST00000466618 RGS12O14924 1447 aa19.39■□□□□ 0.69
SNED1-208ENST00000466618 PANK2Q9BZ23 570 aa19.38■□□□□ 0.69
SNED1-208ENST00000466618 GOLGA6L3A6NEY3 463 aa19.37■□□□□ 0.69
SNED1-208ENST00000466618 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.37■□□□□ 0.69
SNED1-208ENST00000466618 BCL9O00512 1426 aa19.36■□□□□ 0.69
SNED1-208ENST00000466618 IL16Q14005 1332 aa19.35■□□□□ 0.69
SNED1-208ENST00000466618 ARXQ96QS3 562 aa19.35■□□□□ 0.69
SNED1-208ENST00000466618 ERVV-2B6SEH9 535 aa19.34■□□□□ 0.69
SNED1-208ENST00000466618 KRT27Q7Z3Y8 459 aa19.34■□□□□ 0.69
SNED1-208ENST00000466618 SPINK5Q9NQ38 1064 aaPredicted RBP19.34■□□□□ 0.69
SNED1-208ENST00000466618 MRC1P22897 1456 aa19.34■□□□□ 0.69
SNED1-208ENST00000466618 IGHDP01880 384 aa19.34■□□□□ 0.69
SNED1-208ENST00000466618 ZNF853P0CG23 659 aa19.34■□□□□ 0.69
SNED1-208ENST00000466618 CALD1Q05682 793 aaKnown RBP19.34■□□□□ 0.69
SNED1-208ENST00000466618 GOLGA2Q08379 1002 aa19.33■□□□□ 0.69
SNED1-208ENST00000466618 SLC52A2Q9HAB3 445 aa19.33■□□□□ 0.69
SNED1-208ENST00000466618 FAM182BQ5T319 152 aa19.32■□□□□ 0.68
SNED1-208ENST00000466618 CFAP44Q96MT7 982 aa19.32■□□□□ 0.68
SNED1-208ENST00000466618 IFT57Q9NWB7 429 aa19.32■□□□□ 0.68
SNED1-208ENST00000466618 SCN11AQ9UI33 1791 aa19.31■□□□□ 0.68
SNED1-208ENST00000466618 TOGARAM1Q9Y4F4 1720 aa19.31■□□□□ 0.68
SNED1-208ENST00000466618 CHL1O00533 1208 aa19.31■□□□□ 0.68
SNED1-208ENST00000466618 SLFN5Q08AF3 891 aa19.31■□□□□ 0.68
SNED1-208ENST00000466618 TEFQ10587 303 aa19.31■□□□□ 0.68
SNED1-208ENST00000466618 TAF7Q15545 349 aaPredicted RBP19.31■□□□□ 0.68
SNED1-208ENST00000466618 TRMT2AQ8IZ69 625 aaKnown RBP19.31■□□□□ 0.68
SNED1-208ENST00000466618 NFATC2IPQ8NCF5 419 aa19.31■□□□□ 0.68
SNED1-208ENST00000466618 BABAM1Q9NWV8 329 aa19.3■□□□□ 0.68
SNED1-208ENST00000466618 BRWD3Q6RI45 1802 aa19.29■□□□□ 0.68
SNED1-208ENST00000466618 CABP4P57796 275 aa19.29■□□□□ 0.68
SNED1-208ENST00000466618 E9PSI1 815 aa19.29■□□□□ 0.68
SNED1-208ENST00000466618 GNAI1P63096 354 aa19.29■□□□□ 0.68
SNED1-208ENST00000466618 TBC1D2Q9BYX2 928 aa19.29■□□□□ 0.68
SNED1-208ENST00000466618 MCM4P33991 863 aa19.28■□□□□ 0.68
SNED1-208ENST00000466618 PRIM1P49642 420 aaKnown RBP19.28■□□□□ 0.68
SNED1-208ENST00000466618 EP400Q96L91 3159 aa19.28■□□□□ 0.68
SNED1-208ENST00000466618 PIGBQ92521 554 aa19.27■□□□□ 0.68
SNED1-208ENST00000466618 FAM196AQ6ZSG2 479 aa19.27■□□□□ 0.68
SNED1-208ENST00000466618 ACSBG1Q96GR2 724 aa19.27■□□□□ 0.68
SNED1-208ENST00000466618 MBIPQ9NS73 344 aa19.27■□□□□ 0.68
SNED1-208ENST00000466618 MIS18AQ9NYP9 233 aa19.27■□□□□ 0.68
SNED1-208ENST00000466618 SIPA1L3O60292 1781 aaPredicted RBP19.26■□□□□ 0.67
SNED1-208ENST00000466618 TMOD3Q9NYL9 352 aa19.26■□□□□ 0.67
SNED1-208ENST00000466618 ERBB4Q15303 1308 aa19.26■□□□□ 0.67
SNED1-208ENST00000466618 BTBD11A6QL63 1104 aa19.26■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms