RNA–Protein interactions for RNA: ENST00000466579.1

SDCCAG3-208, Transcript of Serologically defined colon cancer antigen 3, humanhuman

TSL 1 (best)

Gene SDCCAG3, Length 496 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCCAG3-208ENST00000466579 HMGB2P26583 209 aaKnown RBP12.63□□□□□ -0.39
SDCCAG3-208ENST00000466579 R3HDM1Q15032 1099 aaKnown RBP12.63□□□□□ -0.39
SDCCAG3-208ENST00000466579 AKT1S1Q96B36 256 aa12.63□□□□□ -0.39
SDCCAG3-208ENST00000466579 LGR6Q9HBX8 967 aa12.63□□□□□ -0.39
SDCCAG3-208ENST00000466579 ASAP1Q9ULH1 1129 aa12.63□□□□□ -0.39
SDCCAG3-208ENST00000466579 GNAT3A8MTJ3 354 aa12.62□□□□□ -0.39
SDCCAG3-208ENST00000466579 CABP4P57796 275 aa12.62□□□□□ -0.39
SDCCAG3-208ENST00000466579 SLC15A2Q16348 729 aa12.62□□□□□ -0.39
SDCCAG3-208ENST00000466579 PNNQ9H307 717 aaKnown RBP12.62□□□□□ -0.39
SDCCAG3-208ENST00000466579 SLC52A2Q9HAB3 445 aa12.62□□□□□ -0.39
SDCCAG3-208ENST00000466579 CCNL1Q9UK58 526 aaPredicted RBP12.62□□□□□ -0.39
SDCCAG3-208ENST00000466579 DLG5Q8TDM6 1919 aa12.62□□□□□ -0.39
SDCCAG3-208ENST00000466579 TUBGCP6Q96RT7 1819 aa12.62□□□□□ -0.39
SDCCAG3-208ENST00000466579 LRP5O75197 1615 aa12.62□□□□□ -0.39
SDCCAG3-208ENST00000466579 PSDA5PKW4 1024 aaPredicted RBP12.61□□□□□ -0.39
SDCCAG3-208ENST00000466579 HTATSF1O43719 755 aaKnown RBP12.61□□□□□ -0.39
SDCCAG3-208ENST00000466579 NFATC2IPQ8NCF5 419 aa12.61□□□□□ -0.39
SDCCAG3-208ENST00000466579 IL17REQ8NFR9 667 aa12.61□□□□□ -0.39
SDCCAG3-208ENST00000466579 STK32BQ9NY57 414 aa12.61□□□□□ -0.39
SDCCAG3-208ENST00000466579 UBR2Q8IWV8 1755 aa12.61□□□□□ -0.39
SDCCAG3-208ENST00000466579 LOC102724428A0A0B4J2F2 783 aa12.6□□□□□ -0.39
SDCCAG3-208ENST00000466579 SIK1P57059 783 aa12.6□□□□□ -0.39
SDCCAG3-208ENST00000466579 ZNF827Q17R98 1081 aa12.6□□□□□ -0.39
SDCCAG3-208ENST00000466579 C4BP0C0L5 1744 aa12.59□□□□□ -0.39
SDCCAG3-208ENST00000466579 COL5A3P25940 1745 aaPredicted RBP12.59□□□□□ -0.39
SDCCAG3-208ENST00000466579 KCNQ4P56696 695 aa12.59□□□□□ -0.39
SDCCAG3-208ENST00000466579 SLC4A9Q96Q91 983 aa12.59□□□□□ -0.39
SDCCAG3-208ENST00000466579 SRCAPQ6ZRS2 3230 aa12.59□□□□□ -0.39
SDCCAG3-208ENST00000466579 KCPQ6ZWJ8 1503 aa12.58□□□□□ -0.4
SDCCAG3-208ENST00000466579 DCAF8L1A6NGE4 600 aa12.58□□□□□ -0.4
SDCCAG3-208ENST00000466579 TJP1Q07157 1748 aa12.58□□□□□ -0.4
SDCCAG3-208ENST00000466579 NFE2L2Q16236 605 aa12.58□□□□□ -0.4
SDCCAG3-208ENST00000466579 COL24A1Q17RW2 1714 aa12.58□□□□□ -0.4
SDCCAG3-208ENST00000466579 UBR3Q6ZT12 1888 aa12.57□□□□□ -0.4
SDCCAG3-208ENST00000466579 ANP32CO43423 234 aa12.57□□□□□ -0.4
SDCCAG3-208ENST00000466579 ITPK1Q13572 414 aa12.57□□□□□ -0.4
SDCCAG3-208ENST00000466579 NEFMP07197 916 aa12.56□□□□□ -0.4
SDCCAG3-208ENST00000466579 LINC00116Q8NCU8 138 aa12.56□□□□□ -0.4
SDCCAG3-208ENST00000466579 ADAMTS8Q9UP79 889 aa12.56□□□□□ -0.4
SDCCAG3-208ENST00000466579 PNPLA7Q6ZV29 1317 aa12.56□□□□□ -0.4
SDCCAG3-208ENST00000466579 ATP6V1AP38606 617 aa12.55□□□□□ -0.4
SDCCAG3-208ENST00000466579 WDR43Q15061 677 aaKnown RBP eCLIP12.55□□□□□ -0.4
SDCCAG3-208ENST00000466579 CCDC184Q52MB2 194 aa12.55□□□□□ -0.4
SDCCAG3-208ENST00000466579 PDGFDQ9GZP0 370 aaPredicted RBP12.55□□□□□ -0.4
SDCCAG3-208ENST00000466579 MYH14Q7Z406 1995 aaKnown RBP12.55□□□□□ -0.4
SDCCAG3-208ENST00000466579 MAPK8IP3Q9UPT6 1336 aa12.55□□□□□ -0.4
SDCCAG3-208ENST00000466579 TEFQ10587 303 aa12.54□□□□□ -0.4
SDCCAG3-208ENST00000466579 RC3H1Q5TC82 1133 aaKnown RBP12.54□□□□□ -0.4
SDCCAG3-208ENST00000466579 MCM10Q7L590 875 aa12.54□□□□□ -0.4
SDCCAG3-208ENST00000466579 VSIG10Q8N0Z9 540 aa12.54□□□□□ -0.4
SDCCAG3-208ENST00000466579 RTF1Q92541 710 aaKnown RBP12.54□□□□□ -0.4
SDCCAG3-208ENST00000466579 RUNDC1Q96C34 613 aa12.54□□□□□ -0.4
SDCCAG3-208ENST00000466579 CNTNAP4Q9C0A0 1308 aa12.54□□□□□ -0.4
SDCCAG3-208ENST00000466579 TMPOP42166 694 aaKnown RBP12.53□□□□□ -0.4
SDCCAG3-208ENST00000466579 SLC39A6Q13433 755 aa12.53□□□□□ -0.4
SDCCAG3-208ENST00000466579 ZNF790Q6PG37 636 aa12.53□□□□□ -0.4
SDCCAG3-208ENST00000466579 PNISRQ8TF01 805 aaKnown RBP12.53□□□□□ -0.4
SDCCAG3-208ENST00000466579 SLC16A10Q8TF71 515 aa12.53□□□□□ -0.4
SDCCAG3-208ENST00000466579 RBM42Q9BTD8 480 aaKnown RBP12.53□□□□□ -0.4
SDCCAG3-208ENST00000466579 TFCP2L1Q9NZI6 479 aa12.53□□□□□ -0.4
SDCCAG3-208ENST00000466579 KDM3BQ7LBC6 1761 aa12.53□□□□□ -0.4
SDCCAG3-208ENST00000466579 PTCD1O75127 700 aaKnown RBP12.52□□□□□ -0.41
SDCCAG3-208ENST00000466579 DCTN1Q14203 1278 aa12.52□□□□□ -0.41
SDCCAG3-208ENST00000466579 AMIGO3Q86WK7 504 aa12.52□□□□□ -0.41
SDCCAG3-208ENST00000466579 FLAD1Q8NFF5 587 aa12.52□□□□□ -0.41
SDCCAG3-208ENST00000466579 SGIP1Q9BQI5 828 aa12.52□□□□□ -0.41
SDCCAG3-208ENST00000466579 SSFA2P28290 1259 aa12.51□□□□□ -0.41
SDCCAG3-208ENST00000466579 TAF7Q15545 349 aaPredicted RBP12.51□□□□□ -0.41
SDCCAG3-208ENST00000466579 COL23A1Q86Y22 540 aaPredicted RBP12.51□□□□□ -0.41
SDCCAG3-208ENST00000466579 AK7Q96M32 723 aa12.51□□□□□ -0.41
SDCCAG3-208ENST00000466579 MTFR1LQ9H019 292 aa12.51□□□□□ -0.41
SDCCAG3-208ENST00000466579 SPON1Q9HCB6 807 aa12.51□□□□□ -0.41
SDCCAG3-208ENST00000466579 BTBD11A6QL63 1104 aa12.5□□□□□ -0.41
SDCCAG3-208ENST00000466579 HOXD11P31277 338 aaPredicted RBP12.5□□□□□ -0.41
SDCCAG3-208ENST00000466579 PTGER2P43116 358 aa12.5□□□□□ -0.41
SDCCAG3-208ENST00000466579 RIPK4P57078 832 aa12.5□□□□□ -0.41
SDCCAG3-208ENST00000466579 LMOD3Q0VAK6 560 aa12.5□□□□□ -0.41
SDCCAG3-208ENST00000466579 CCDC146Q8IYE0 955 aa12.5□□□□□ -0.41
SDCCAG3-208ENST00000466579 ZNF496Q96IT1 587 aaPredicted RBP12.5□□□□□ -0.41
SDCCAG3-208ENST00000466579 HEG1Q9ULI3 1381 aa12.5□□□□□ -0.41
SDCCAG3-208ENST00000466579 KCNQ3O43525 872 aa12.49□□□□□ -0.41
SDCCAG3-208ENST00000466579 CYP19A1P11511 503 aaPredicted RBP12.49□□□□□ -0.41
SDCCAG3-208ENST00000466579 DNAJC10Q8IXB1 793 aa12.49□□□□□ -0.41
SDCCAG3-208ENST00000466579 TTC5Q8N0Z6 440 aa12.49□□□□□ -0.41
SDCCAG3-208ENST00000466579 FMNL2Q96PY5 1086 aa12.49□□□□□ -0.41
SDCCAG3-208ENST00000466579 MRS2Q9HD23 443 aa12.49□□□□□ -0.41
SDCCAG3-208ENST00000466579 BABAM1Q9NWV8 329 aa12.49□□□□□ -0.41
SDCCAG3-208ENST00000466579 TRIM35Q9UPQ4 493 aa12.49□□□□□ -0.41
SDCCAG3-208ENST00000466579 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.48□□□□□ -0.41
SDCCAG3-208ENST00000466579 GNPATO15228 680 aa12.48□□□□□ -0.41
SDCCAG3-208ENST00000466579 RPS6KA4O75676 772 aa12.48□□□□□ -0.41
SDCCAG3-208ENST00000466579 ZBTB7AO95365 584 aa12.48□□□□□ -0.41
SDCCAG3-208ENST00000466579 CRKLP46109 303 aaKnown RBP12.48□□□□□ -0.41
SDCCAG3-208ENST00000466579 NCBP3Q53F19 620 aaKnown RBP12.48□□□□□ -0.41
SDCCAG3-208ENST00000466579 INTS5Q6P9B9 1019 aaKnown RBP12.48□□□□□ -0.41
SDCCAG3-208ENST00000466579 TEX13AQ9BXU3 409 aaPredicted RBP12.48□□□□□ -0.41
SDCCAG3-208ENST00000466579 RNF39Q9H2S5 420 aa12.48□□□□□ -0.41
SDCCAG3-208ENST00000466579 C4AP0C0L4 1744 aa12.48□□□□□ -0.41
SDCCAG3-208ENST00000466579 PPP4R3CPQ6ZMV5 832 aa12.47□□□□□ -0.41
SDCCAG3-208ENST00000466579 THUMPD2Q9BTF0 503 aaKnown RBP12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 85.9 ms