RNA–Protein interactions for RNA: ENST00000466351.1

CDHR3-204, Transcript of cadherin related family member 3, humanhuman

TSL 3

Gene CDHR3, Length 362 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-204ENST00000466351 GNAT3A8MTJ3 354 aa8.49□□□□□ -1.05
CDHR3-204ENST00000466351 REC8O95072 547 aa8.49□□□□□ -1.05
CDHR3-204ENST00000466351 HOXC9P31274 260 aa8.49□□□□□ -1.05
CDHR3-204ENST00000466351 MCM4P33991 863 aa8.49□□□□□ -1.05
CDHR3-204ENST00000466351 SLC4A3P48751 1232 aa8.49□□□□□ -1.05
CDHR3-204ENST00000466351 SKOR2Q2VWA4 1001 aaPredicted RBP8.49□□□□□ -1.05
CDHR3-204ENST00000466351 HSP90AB2PQ58FF8 381 aa8.49□□□□□ -1.05
CDHR3-204ENST00000466351 TBC1D9Q6ZT07 1266 aa8.49□□□□□ -1.05
CDHR3-204ENST00000466351 AEBP1Q8IUX7 1158 aa8.49□□□□□ -1.05
CDHR3-204ENST00000466351 PLEKHM2Q8IWE5 1019 aa8.49□□□□□ -1.05
CDHR3-204ENST00000466351 KCNH5Q8NCM2 988 aa8.49□□□□□ -1.05
CDHR3-204ENST00000466351 NGDNQ8NEJ9 315 aaKnown RBP8.49□□□□□ -1.05
CDHR3-204ENST00000466351 SRCIN1Q9C0H9 1055 aa8.49□□□□□ -1.05
CDHR3-204ENST00000466351 NCKAP5LQ9HCH0 1330 aa8.49□□□□□ -1.05
CDHR3-204ENST00000466351 SCN11AQ9UI33 1791 aa8.48□□□□□ -1.05
CDHR3-204ENST00000466351 FAM83GA6ND36 823 aa8.48□□□□□ -1.05
CDHR3-204ENST00000466351 K7ELQ4 463 aaPredicted RBP8.48□□□□□ -1.05
CDHR3-204ENST00000466351 AMPHP49418 695 aa8.48□□□□□ -1.05
CDHR3-204ENST00000466351 GBP4Q96PP9 640 aa8.48□□□□□ -1.05
CDHR3-204ENST00000466351 EYA1Q99502 592 aa8.48□□□□□ -1.05
CDHR3-204ENST00000466351 TSPYL4Q9UJ04 414 aa8.48□□□□□ -1.05
CDHR3-204ENST00000466351 FBLN1P23142 703 aa8.47□□□□□ -1.05
CDHR3-204ENST00000466351 MTHFSDQ2M296 383 aaKnown RBP8.47□□□□□ -1.05
CDHR3-204ENST00000466351 SLC26A8Q96RN1 970 aa8.47□□□□□ -1.05
CDHR3-204ENST00000466351 KIF2CQ99661 725 aa8.47□□□□□ -1.05
CDHR3-204ENST00000466351 HDAC5Q9UQL6 1122 aa8.47□□□□□ -1.05
CDHR3-204ENST00000466351 RGPD2P0DJD1 1756 aa8.47□□□□□ -1.05
CDHR3-204ENST00000466351 GNAI2P04899 355 aa8.46□□□□□ -1.06
CDHR3-204ENST00000466351 MCM2P49736 904 aa8.46□□□□□ -1.06
CDHR3-204ENST00000466351 ANAPC15P60006 121 aa8.46□□□□□ -1.06
CDHR3-204ENST00000466351 RAB3GAP1Q15042 981 aa8.46□□□□□ -1.06
CDHR3-204ENST00000466351 ANKLE2Q86XL3 938 aa8.46□□□□□ -1.06
CDHR3-204ENST00000466351 KLHL34Q8N239 644 aa8.46□□□□□ -1.06
CDHR3-204ENST00000466351 IP6K1Q92551 441 aa8.46□□□□□ -1.06
CDHR3-204ENST00000466351 SLKQ9H2G2 1235 aaPredicted RBP8.46□□□□□ -1.06
CDHR3-204ENST00000466351 CWC22Q9HCG8 908 aaKnown RBP8.46□□□□□ -1.06
CDHR3-204ENST00000466351 ZBTB12Q9Y330 459 aaPredicted RBP8.46□□□□□ -1.06
CDHR3-204ENST00000466351 SALL3Q9BXA9 1300 aa8.46□□□□□ -1.06
CDHR3-204ENST00000466351 PKD1L3Q7Z443 1732 aa8.46□□□□□ -1.06
CDHR3-204ENST00000466351 LAMB4A4D0S4 1761 aa8.45□□□□□ -1.06
CDHR3-204ENST00000466351 FSD2A1L4K1 749 aa8.45□□□□□ -1.06
CDHR3-204ENST00000466351 GSPT1P15170 499 aaKnown RBP8.45□□□□□ -1.06
CDHR3-204ENST00000466351 KCNA6P17658 529 aa8.45□□□□□ -1.06
CDHR3-204ENST00000466351 NLRP6P59044 892 aa8.45□□□□□ -1.06
CDHR3-204ENST00000466351 DCTN1Q14203 1278 aa8.45□□□□□ -1.06
CDHR3-204ENST00000466351 TAF7Q15545 349 aaPredicted RBP8.45□□□□□ -1.06
CDHR3-204ENST00000466351 AMOTQ4VCS5 1084 aa8.45□□□□□ -1.06
CDHR3-204ENST00000466351 MCM10Q7L590 875 aa8.45□□□□□ -1.06
CDHR3-204ENST00000466351 STAP2Q9UGK3 403 aa8.45□□□□□ -1.06
CDHR3-204ENST00000466351 PHF8Q9UPP1 1060 aa8.45□□□□□ -1.06
CDHR3-204ENST00000466351 NPHP4O75161 1426 aaPredicted RBP8.45□□□□□ -1.06
CDHR3-204ENST00000466351 MRC1P22897 1456 aa8.45□□□□□ -1.06
CDHR3-204ENST00000466351 GOLGA6L22H0YM25 854 aa8.44□□□□□ -1.06
CDHR3-204ENST00000466351 ST18O60284 1047 aa8.44□□□□□ -1.06
CDHR3-204ENST00000466351 RAB11FIP3O75154 756 aa8.44□□□□□ -1.06
CDHR3-204ENST00000466351 HSP90AB1P08238 724 aaKnown RBP8.44□□□□□ -1.06
CDHR3-204ENST00000466351 NUCB2P80303 420 aa8.44□□□□□ -1.06
CDHR3-204ENST00000466351 FLIIQ13045 1269 aa8.44□□□□□ -1.06
CDHR3-204ENST00000466351 HEG1Q9ULI3 1381 aa8.44□□□□□ -1.06
CDHR3-204ENST00000466351 ELL2O00472 640 aaPredicted RBP8.43□□□□□ -1.06
CDHR3-204ENST00000466351 HSP90AB4PQ58FF6 505 aa8.43□□□□□ -1.06
CDHR3-204ENST00000466351 MEIS3Q99687 375 aa8.43□□□□□ -1.06
CDHR3-204ENST00000466351 USP26Q9BXU7 913 aa8.43□□□□□ -1.06
CDHR3-204ENST00000466351 ERC2O15083 957 aa8.42□□□□□ -1.06
CDHR3-204ENST00000466351 MRE11P49959 708 aa8.42□□□□□ -1.06
CDHR3-204ENST00000466351 PDE1AP54750 535 aa8.42□□□□□ -1.06
CDHR3-204ENST00000466351 ATP8B2P98198 1209 aa8.42□□□□□ -1.06
CDHR3-204ENST00000466351 MTX1Q13505 466 aa8.42□□□□□ -1.06
CDHR3-204ENST00000466351 AKAP4Q5JQC9 854 aa8.42□□□□□ -1.06
CDHR3-204ENST00000466351 FAM43AQ8N2R8 423 aa8.42□□□□□ -1.06
CDHR3-204ENST00000466351 ABTB2Q8N961 1025 aa8.42□□□□□ -1.06
CDHR3-204ENST00000466351 SSH3Q8TE77 659 aa8.42□□□□□ -1.06
CDHR3-204ENST00000466351 LRRCC1Q9C099 1032 aa8.42□□□□□ -1.06
CDHR3-204ENST00000466351 C1orf115Q9H7X2 142 aa8.42□□□□□ -1.06
CDHR3-204ENST00000466351 USP42Q9H9J4 1324 aaKnown RBP8.42□□□□□ -1.06
CDHR3-204ENST00000466351 COL18A1P39060 1754 aa8.42□□□□□ -1.06
CDHR3-204ENST00000466351 GOLGA6L3A6NEY3 463 aa8.41□□□□□ -1.06
CDHR3-204ENST00000466351 SDSP20132 328 aa8.41□□□□□ -1.06
CDHR3-204ENST00000466351 MCCP23508 829 aa8.41□□□□□ -1.06
CDHR3-204ENST00000466351 CEBPAP49715 358 aaPredicted RBP8.41□□□□□ -1.06
CDHR3-204ENST00000466351 RBM42Q9BTD8 480 aaKnown RBP8.41□□□□□ -1.06
CDHR3-204ENST00000466351 RGPD5Q99666 1765 aa8.4□□□□□ -1.06
CDHR3-204ENST00000466351 COL15A1P39059 1388 aa8.4□□□□□ -1.06
CDHR3-204ENST00000466351 TRAK2O60296 914 aa8.4□□□□□ -1.06
CDHR3-204ENST00000466351 ALDH1L1O75891 902 aa8.4□□□□□ -1.06
CDHR3-204ENST00000466351 CYP2E1P05181 493 aaPredicted RBP8.4□□□□□ -1.06
CDHR3-204ENST00000466351 HSP90AA1P07900 732 aaKnown RBP8.4□□□□□ -1.06
CDHR3-204ENST00000466351 PDIA4P13667 645 aaKnown RBP8.4□□□□□ -1.06
CDHR3-204ENST00000466351 MX1P20591 662 aa8.4□□□□□ -1.06
CDHR3-204ENST00000466351 FKBP5Q13451 457 aaPredicted RBP8.4□□□□□ -1.06
CDHR3-204ENST00000466351 PLEKHO1Q53GL0 409 aaPredicted RBP8.4□□□□□ -1.06
CDHR3-204ENST00000466351 IL17REQ8NFR9 667 aa8.4□□□□□ -1.06
CDHR3-204ENST00000466351 INTS4Q96HW7 963 aaKnown RBP8.4□□□□□ -1.06
CDHR3-204ENST00000466351 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.4□□□□□ -1.06
CDHR3-204ENST00000466351 TTC41PQ6P2S7 1318 aa8.39□□□□□ -1.07
CDHR3-204ENST00000466351 UBTFL1P0CB47 393 aaPredicted RBP8.39□□□□□ -1.07
CDHR3-204ENST00000466351 KRT24Q2M2I5 525 aa8.39□□□□□ -1.07
CDHR3-204ENST00000466351 KLHL40Q2TBA0 621 aa8.39□□□□□ -1.07
CDHR3-204ENST00000466351 HDGFL1Q5TGJ6 251 aa8.39□□□□□ -1.07
CDHR3-204ENST00000466351 ARHGEF25Q86VW2 580 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms