RNA–Protein interactions for RNA: ENST00000466274.1

NCL-208, Transcript of nucleolin, humanhuman

TSL 2

Gene NCL, Length 671 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCL-208ENST00000466274 AFF2P51816 1311 aa9.55□□□□□ -0.88
NCL-208ENST00000466274 CCDC18Q5T9S5 1454 aa9.54□□□□□ -0.88
NCL-208ENST00000466274 ROBO1Q9Y6N7 1651 aa9.54□□□□□ -0.88
NCL-208ENST00000466274 CCNB3Q8WWL7 1395 aa9.53□□□□□ -0.88
NCL-208ENST00000466274 GPATCH8Q9UKJ3 1502 aaKnown RBP9.53□□□□□ -0.88
NCL-208ENST00000466274 SPDYE5A6NIY4 337 aa9.53□□□□□ -0.88
NCL-208ENST00000466274 INO80Q9ULG1 1556 aaPredicted RBP9.53□□□□□ -0.88
NCL-208ENST00000466274 LRP6O75581 1613 aa9.53□□□□□ -0.88
NCL-208ENST00000466274 STRCP1A6NGW2 1772 aa9.52□□□□□ -0.88
NCL-208ENST00000466274 SPTLC1O15269 473 aa9.52□□□□□ -0.89
NCL-208ENST00000466274 DESI1Q6ICB0 168 aa9.52□□□□□ -0.89
NCL-208ENST00000466274 CFAP99D6REC4 459 aa9.51□□□□□ -0.89
NCL-208ENST00000466274 GJA5P36382 358 aa9.51□□□□□ -0.89
NCL-208ENST00000466274 DIXDC1Q155Q3 683 aa9.51□□□□□ -0.89
NCL-208ENST00000466274 TRIM47Q96LD4 638 aa9.51□□□□□ -0.89
NCL-208ENST00000466274 WASF2Q9Y6W5 498 aa9.51□□□□□ -0.89
NCL-208ENST00000466274 RGS12O14924 1447 aa9.5□□□□□ -0.89
NCL-208ENST00000466274 WFS1O76024 890 aa9.5□□□□□ -0.89
NCL-208ENST00000466274 HRCP23327 699 aa9.5□□□□□ -0.89
NCL-208ENST00000466274 CTHP32929 405 aa9.5□□□□□ -0.89
NCL-208ENST00000466274 CSPP1Q1MSJ5 1256 aa9.5□□□□□ -0.89
NCL-208ENST00000466274 LYPD8Q6UX82 237 aa9.5□□□□□ -0.89
NCL-208ENST00000466274 RIC3Q7Z5B4 369 aa9.5□□□□□ -0.89
NCL-208ENST00000466274 CABLES1Q8TDN4 633 aa9.5□□□□□ -0.89
NCL-208ENST00000466274 BCANQ96GW7 911 aa9.5□□□□□ -0.89
NCL-208ENST00000466274 SENP2Q9HC62 589 aa9.5□□□□□ -0.89
NCL-208ENST00000466274 ADGBQ8N7X0 1667 aa9.49□□□□□ -0.89
NCL-208ENST00000466274 C14orf37Q86TY3 774 aa9.49□□□□□ -0.89
NCL-208ENST00000466274 ZNF511Q8NB15 262 aa9.49□□□□□ -0.89
NCL-208ENST00000466274 C8orf37Q96NL8 207 aa9.49□□□□□ -0.89
NCL-208ENST00000466274 ABCC3O15438 1527 aa9.49□□□□□ -0.89
NCL-208ENST00000466274 PRDM15P57071 1507 aaPredicted RBP9.49□□□□□ -0.89
NCL-208ENST00000466274 TMEM2Q9UHN6 1383 aa9.49□□□□□ -0.89
NCL-208ENST00000466274 PHLPP1O60346 1717 aa9.48□□□□□ -0.89
NCL-208ENST00000466274 ARHGAP35Q9NRY4 1499 aa9.48□□□□□ -0.89
NCL-208ENST00000466274 ARHGAP23Q9P227 1491 aa9.48□□□□□ -0.89
NCL-208ENST00000466274 SLIT1O75093 1534 aa9.48□□□□□ -0.89
NCL-208ENST00000466274 TSPY4P0CV99 314 aa9.48□□□□□ -0.89
NCL-208ENST00000466274 TSPY10P0CW01 314 aa9.48□□□□□ -0.89
NCL-208ENST00000466274 ATF3P18847 181 aa9.48□□□□□ -0.89
NCL-208ENST00000466274 PDE4DQ08499 809 aa9.48□□□□□ -0.89
NCL-208ENST00000466274 NFX1Q12986 1120 aaKnown RBP9.48□□□□□ -0.89
NCL-208ENST00000466274 SLC26A8Q96RN1 970 aa9.48□□□□□ -0.89
NCL-208ENST00000466274 ZBTB3Q9H5J0 574 aa9.48□□□□□ -0.89
NCL-208ENST00000466274 TLL2Q9Y6L7 1015 aa9.48□□□□□ -0.89
NCL-208ENST00000466274 CASKIN1Q8WXD9 1431 aa9.48□□□□□ -0.89
NCL-208ENST00000466274 NKTRP30414 1462 aaKnown RBP9.47□□□□□ -0.89
NCL-208ENST00000466274 ERVK-7P63135 1459 aa9.47□□□□□ -0.89
NCL-208ENST00000466274 SETBP1Q9Y6X0 1596 aa9.47□□□□□ -0.89
NCL-208ENST00000466274 CAPN5O15484 640 aaPredicted RBP9.47□□□□□ -0.89
NCL-208ENST00000466274 NCOA3Q9Y6Q9 1424 aa9.47□□□□□ -0.89
NCL-208ENST00000466274 NCOA2Q15596 1464 aa9.47□□□□□ -0.89
NCL-208ENST00000466274 MAP3K1Q13233 1512 aa9.46□□□□□ -0.89
NCL-208ENST00000466274 ZC3H13Q5T200 1668 aaKnown RBP9.46□□□□□ -0.89
NCL-208ENST00000466274 BMP1P13497 986 aa9.46□□□□□ -0.9
NCL-208ENST00000466274 LRRC59Q96AG4 307 aaKnown RBP9.46□□□□□ -0.9
NCL-208ENST00000466274 SLC24A3Q9HC58 644 aa9.46□□□□□ -0.9
NCL-208ENST00000466274 MAP10Q9P2G4 905 aa9.46□□□□□ -0.9
NCL-208ENST00000466274 LIMD1Q9UGP4 676 aa9.46□□□□□ -0.9
NCL-208ENST00000466274 VARSP26640 1264 aaKnown RBP9.45□□□□□ -0.9
NCL-208ENST00000466274 TRIM46Q7Z4K8 759 aa9.45□□□□□ -0.9
NCL-208ENST00000466274 KIFC2Q96AC6 838 aa9.45□□□□□ -0.9
NCL-208ENST00000466274 C19orf44Q9H6X5 657 aa9.45□□□□□ -0.9
NCL-208ENST00000466274 TRPC5Q9UL62 973 aaPredicted RBP9.45□□□□□ -0.9
NCL-208ENST00000466274 ZNF644Q9H582 1327 aaPredicted RBP9.45□□□□□ -0.9
NCL-208ENST00000466274 MBD5Q9P267 1494 aa9.45□□□□□ -0.9
NCL-208ENST00000466274 PER1O15534 1290 aaPredicted RBP9.44□□□□□ -0.9
NCL-208ENST00000466274 SF3B2Q13435 895 aaKnown RBP9.44□□□□□ -0.9
NCL-208ENST00000466274 QPCTQ16769 361 aa9.44□□□□□ -0.9
NCL-208ENST00000466274 PRPF38BQ5VTL8 546 aaKnown RBP9.44□□□□□ -0.9
NCL-208ENST00000466274 MYSM1Q5VVJ2 828 aa9.44□□□□□ -0.9
NCL-208ENST00000466274 COL16A1Q07092 1604 aaPredicted RBP9.44□□□□□ -0.9
NCL-208ENST00000466274 CDC42BPAQ5VT25 1732 aa9.43□□□□□ -0.9
NCL-208ENST00000466274 TERTO14746 1132 aaKnown RBP9.43□□□□□ -0.9
NCL-208ENST00000466274 F12P00748 615 aaPredicted RBP9.43□□□□□ -0.9
NCL-208ENST00000466274 YY1P25490 414 aa9.43□□□□□ -0.9
NCL-208ENST00000466274 LCE2CQ5TA81 110 aa9.43□□□□□ -0.9
NCL-208ENST00000466274 TSC1Q92574 1164 aa9.43□□□□□ -0.9
NCL-208ENST00000466274 FOXJ1Q92949 421 aa9.43□□□□□ -0.9
NCL-208ENST00000466274 TIAM1Q13009 1591 aa9.42□□□□□ -0.9
NCL-208ENST00000466274 MTUS2Q5JR59 1369 aa9.42□□□□□ -0.9
NCL-208ENST00000466274 USP21Q9UK80 565 aa9.42□□□□□ -0.9
NCL-208ENST00000466274 PLEKHG3A1L390 1219 aa9.41□□□□□ -0.9
NCL-208ENST00000466274 NNTQ13423 1086 aa9.41□□□□□ -0.9
NCL-208ENST00000466274 BRINP3Q76B58 766 aa9.41□□□□□ -0.9
NCL-208ENST00000466274 AHDC1Q5TGY3 1603 aaPredicted RBP9.41□□□□□ -0.9
NCL-208ENST00000466274 CCDC141Q6ZP82 1450 aa9.4□□□□□ -0.9
NCL-208ENST00000466274 XIRP1Q702N8 1843 aaKnown RBP9.4□□□□□ -0.9
NCL-208ENST00000466274 MPNDQ8N594 471 aa9.4□□□□□ -0.9
NCL-208ENST00000466274 SETD5Q9C0A6 1442 aa9.39□□□□□ -0.91
NCL-208ENST00000466274 LILRB3O75022 631 aa9.39□□□□□ -0.91
NCL-208ENST00000466274 ADAMTS2O95450 1211 aa9.39□□□□□ -0.91
NCL-208ENST00000466274 RTL5Q5HYW3 569 aaPredicted RBP9.39□□□□□ -0.91
NCL-208ENST00000466274 FAM174AQ8TBP5 190 aa9.39□□□□□ -0.91
NCL-208ENST00000466274 ARHGAP31Q2M1Z3 1444 aa9.39□□□□□ -0.91
NCL-208ENST00000466274 SHPRHQ149N8 1683 aa9.39□□□□□ -0.91
NCL-208ENST00000466274 NWD1Q149M9 1564 aa9.38□□□□□ -0.91
NCL-208ENST00000466274 PPP1R15AO75807 674 aaPredicted RBP9.38□□□□□ -0.91
NCL-208ENST00000466274 ARID5BQ14865 1188 aa9.38□□□□□ -0.91
NCL-208ENST00000466274 UBR1Q8IWV7 1749 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms