RNA–Protein interactions for RNA: ENST00000466252.5

SNX21-208, Transcript of sorting nexin family member 21, humanhuman

TSL 3

Gene SNX21, Length 574 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX21-208ENST00000466252 NBPF14Q5TI25 921 aa30.52■■■□□ 2.48
SNX21-208ENST00000466252 DLG5Q8TDM6 1919 aa30.51■■■□□ 2.48
SNX21-208ENST00000466252 RUNDC1Q96C34 613 aa30.51■■■□□ 2.47
SNX21-208ENST00000466252 ANO8Q9HCE9 1232 aaPredicted RBP30.5■■■□□ 2.47
SNX21-208ENST00000466252 MRS2Q9HD23 443 aa30.5■■■□□ 2.47
SNX21-208ENST00000466252 CCNL1Q9UK58 526 aaPredicted RBP30.5■■■□□ 2.47
SNX21-208ENST00000466252 MRC1P22897 1456 aa30.5■■■□□ 2.47
SNX21-208ENST00000466252 CCDC146Q8IYE0 955 aa30.49■■■□□ 2.47
SNX21-208ENST00000466252 MAPK8IP3Q9UPT6 1336 aa30.48■■■□□ 2.47
SNX21-208ENST00000466252 LOC102724428A0A0B4J2F2 783 aa30.48■■■□□ 2.47
SNX21-208ENST00000466252 TMPOP42166 694 aaKnown RBP30.48■■■□□ 2.47
SNX21-208ENST00000466252 SIK1P57059 783 aa30.48■■■□□ 2.47
SNX21-208ENST00000466252 DCTN1Q14203 1278 aa30.48■■■□□ 2.47
SNX21-208ENST00000466252 MCM10Q7L590 875 aa30.48■■■□□ 2.47
SNX21-208ENST00000466252 R3HDM1Q15032 1099 aaKnown RBP30.47■■■□□ 2.47
SNX21-208ENST00000466252 RTF1Q92541 710 aaKnown RBP30.47■■■□□ 2.47
SNX21-208ENST00000466252 SLC4A9Q96Q91 983 aa30.47■■■□□ 2.47
SNX21-208ENST00000466252 SLC15A2Q16348 729 aa30.46■■■□□ 2.47
SNX21-208ENST00000466252 PSDA5PKW4 1024 aaPredicted RBP30.45■■■□□ 2.47
SNX21-208ENST00000466252 TEFQ10587 303 aa30.45■■■□□ 2.47
SNX21-208ENST00000466252 AKT1S1Q96B36 256 aa30.45■■■□□ 2.47
SNX21-208ENST00000466252 PAPPAQ13219 1627 aa30.44■■■□□ 2.46
SNX21-208ENST00000466252 RIPK4P57078 832 aa30.44■■■□□ 2.46
SNX21-208ENST00000466252 SLC39A6Q13433 755 aa30.44■■■□□ 2.46
SNX21-208ENST00000466252 SIPA1L3O60292 1781 aaPredicted RBP30.43■■■□□ 2.46
SNX21-208ENST00000466252 ITPK1Q13572 414 aa30.42■■■□□ 2.46
SNX21-208ENST00000466252 STK32BQ9NY57 414 aa30.42■■■□□ 2.46
SNX21-208ENST00000466252 TAF1LQ8IZX4 1826 aa30.42■■■□□ 2.46
SNX21-208ENST00000466252 ATP6V1AP38606 617 aa30.41■■■□□ 2.46
SNX21-208ENST00000466252 ZNF827Q17R98 1081 aa30.41■■■□□ 2.46
SNX21-208ENST00000466252 RBM42Q9BTD8 480 aaKnown RBP30.41■■■□□ 2.46
SNX21-208ENST00000466252 PTCD1O75127 700 aaKnown RBP30.4■■■□□ 2.46
SNX21-208ENST00000466252 HMGB2P26583 209 aaKnown RBP30.39■■■□□ 2.46
SNX21-208ENST00000466252 DIEXFQ68CQ4 756 aaKnown RBP30.39■■■□□ 2.46
SNX21-208ENST00000466252 RRP7AQ9Y3A4 280 aaKnown RBP30.39■■■□□ 2.46
SNX21-208ENST00000466252 TAF7Q15545 349 aaPredicted RBP30.38■■■□□ 2.45
SNX21-208ENST00000466252 ZNF831Q5JPB2 1677 aa30.38■■■□□ 2.45
SNX21-208ENST00000466252 ZNF790Q6PG37 636 aa30.37■■■□□ 2.45
SNX21-208ENST00000466252 LINC00116Q8NCU8 138 aa30.37■■■□□ 2.45
SNX21-208ENST00000466252 TRIM35Q9UPQ4 493 aa30.37■■■□□ 2.45
SNX21-208ENST00000466252 APAF1O14727 1248 aa30.36■■■□□ 2.45
SNX21-208ENST00000466252 THUMPD2Q9BTF0 503 aaKnown RBP30.36■■■□□ 2.45
SNX21-208ENST00000466252 BTBD11A6QL63 1104 aa30.35■■■□□ 2.45
SNX21-208ENST00000466252 KCNQ3O43525 872 aa30.35■■■□□ 2.45
SNX21-208ENST00000466252 NEUROD2Q15784 382 aa30.35■■■□□ 2.45
SNX21-208ENST00000466252 C5P01031 1676 aa30.34■■■□□ 2.45
SNX21-208ENST00000466252 PDGFDQ9GZP0 370 aaPredicted RBP30.34■■■□□ 2.45
SNX21-208ENST00000466252 ZNF496Q96IT1 587 aaPredicted RBP30.32■■■□□ 2.44
SNX21-208ENST00000466252 KCPQ6ZWJ8 1503 aa30.32■■■□□ 2.44
SNX21-208ENST00000466252 UBR2Q8IWV8 1755 aa30.31■■■□□ 2.44
SNX21-208ENST00000466252 CCER2I3L3R5 266 aa30.3■■■□□ 2.44
SNX21-208ENST00000466252 LMOD3Q0VAK6 560 aa30.3■■■□□ 2.44
SNX21-208ENST00000466252 VSIG10Q8N0Z9 540 aa30.3■■■□□ 2.44
SNX21-208ENST00000466252 MIS18AQ9NYP9 233 aa30.3■■■□□ 2.44
SNX21-208ENST00000466252 RC3H1Q5TC82 1133 aaKnown RBP30.29■■■□□ 2.44
SNX21-208ENST00000466252 TTC5Q8N0Z6 440 aa30.29■■■□□ 2.44
SNX21-208ENST00000466252 TFCP2L1Q9NZI6 479 aa30.29■■■□□ 2.44
SNX21-208ENST00000466252 C4BP0C0L5 1744 aa30.29■■■□□ 2.44
SNX21-208ENST00000466252 PNPLA7Q6ZV29 1317 aa30.28■■■□□ 2.44
SNX21-208ENST00000466252 MYH14Q7Z406 1995 aaKnown RBP30.28■■■□□ 2.44
SNX21-208ENST00000466252 AMIGO3Q86WK7 504 aa30.27■■■□□ 2.44
SNX21-208ENST00000466252 DNAJC10Q8IXB1 793 aa30.27■■■□□ 2.44
SNX21-208ENST00000466252 FAM9BQ8IZU0 186 aa30.27■■■□□ 2.44
SNX21-208ENST00000466252 QSER1Q2KHR3 1735 aa30.27■■■□□ 2.44
SNX21-208ENST00000466252 TUBGCP6Q96RT7 1819 aa30.26■■■□□ 2.44
SNX21-208ENST00000466252 CICQ96RK0 1608 aaPredicted RBP30.25■■■□□ 2.43
SNX21-208ENST00000466252 COL5A3P25940 1745 aaPredicted RBP30.25■■■□□ 2.43
SNX21-208ENST00000466252 MIER1Q8N108 512 aa30.25■■■□□ 2.43
SNX21-208ENST00000466252 CASZ1Q86V15 1759 aa30.25■■■□□ 2.43
SNX21-208ENST00000466252 HEG1Q9ULI3 1381 aa30.25■■■□□ 2.43
SNX21-208ENST00000466252 TJP1Q07157 1748 aa30.25■■■□□ 2.43
SNX21-208ENST00000466252 CYP19A1P11511 503 aaPredicted RBP30.24■■■□□ 2.43
SNX21-208ENST00000466252 COL23A1Q86Y22 540 aaPredicted RBP30.24■■■□□ 2.43
SNX21-208ENST00000466252 FMNL2Q96PY5 1086 aa30.24■■■□□ 2.43
SNX21-208ENST00000466252 CNTNAP4Q9C0A0 1308 aa30.23■■■□□ 2.43
SNX21-208ENST00000466252 NCBP3Q53F19 620 aaKnown RBP30.23■■■□□ 2.43
SNX21-208ENST00000466252 INTS5Q6P9B9 1019 aaKnown RBP30.23■■■□□ 2.43
SNX21-208ENST00000466252 SMIM5Q71RC9 77 aa30.23■■■□□ 2.43
SNX21-208ENST00000466252 AK7Q96M32 723 aa30.23■■■□□ 2.43
SNX21-208ENST00000466252 BABAM1Q9NWV8 329 aa30.23■■■□□ 2.43
SNX21-208ENST00000466252 UBR3Q6ZT12 1888 aa30.23■■■□□ 2.43
SNX21-208ENST00000466252 RPS6KA4O75676 772 aa30.21■■■□□ 2.43
SNX21-208ENST00000466252 CRKLP46109 303 aaKnown RBP30.21■■■□□ 2.43
SNX21-208ENST00000466252 TEX13AQ9BXU3 409 aaPredicted RBP30.21■■■□□ 2.43
SNX21-208ENST00000466252 CHL1O00533 1208 aa30.2■■■□□ 2.43
SNX21-208ENST00000466252 FLAD1Q8NFF5 587 aa30.2■■■□□ 2.43
SNX21-208ENST00000466252 EIF4A1P60842 406 aaKnown RBP30.19■■■□□ 2.42
SNX21-208ENST00000466252 CCDC27Q2M243 656 aa30.19■■■□□ 2.42
SNX21-208ENST00000466252 SLC16A10Q8TF71 515 aa30.19■■■□□ 2.42
SNX21-208ENST00000466252 KDM3BQ7LBC6 1761 aa30.18■■■□□ 2.42
SNX21-208ENST00000466252 SENP3-EIF4A1A0A087X0R7 540 aa30.18■■■□□ 2.42
SNX21-208ENST00000466252 GNPATO15228 680 aa30.18■■■□□ 2.42
SNX21-208ENST00000466252 SSFA2P28290 1259 aa30.18■■■□□ 2.42
SNX21-208ENST00000466252 USP16Q9Y5T5 823 aa30.18■■■□□ 2.42
SNX21-208ENST00000466252 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP30.17■■■□□ 2.42
SNX21-208ENST00000466252 RTCBQ9Y3I0 505 aaKnown RBP30.17■■■□□ 2.42
SNX21-208ENST00000466252 PRAMEF22A3QJZ6 481 aa30.16■■■□□ 2.42
SNX21-208ENST00000466252 SNRPA1P09661 255 aaKnown RBP30.16■■■□□ 2.42
SNX21-208ENST00000466252 ZBTB7AO95365 584 aa30.15■■■□□ 2.42
SNX21-208ENST00000466252 STARD3NLO95772 234 aa30.15■■■□□ 2.42
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms