RNA–Protein interactions for RNA: ENST00000466138.1

CSF3R-208, Transcript of colony stimulating factor 3 receptor, humanhuman

TSL 3

Gene CSF3R, Length 335 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSF3R-208ENST00000466138 CCDC61Q9Y6R9 512 aa15.32■□□□□ 0.04
CSF3R-208ENST00000466138 C4BP0C0L5 1744 aa15.31■□□□□ 0.04
CSF3R-208ENST00000466138 PLEKHG3A1L390 1219 aa15.3■□□□□ 0.04
CSF3R-208ENST00000466138 AOC2O75106 756 aa15.3■□□□□ 0.04
CSF3R-208ENST00000466138 LTBP1Q14766 1721 aa15.29■□□□□ 0.04
CSF3R-208ENST00000466138 ITGBL1O95965 494 aaPredicted RBP15.29■□□□□ 0.04
CSF3R-208ENST00000466138 EAPPQ56P03 285 aaPredicted RBP15.29■□□□□ 0.04
CSF3R-208ENST00000466138 CLEC11AQ9Y240 323 aa15.29■□□□□ 0.04
CSF3R-208ENST00000466138 TIAM2Q8IVF5 1701 aa15.29■□□□□ 0.04
CSF3R-208ENST00000466138 SSFA2P28290 1259 aa15.28■□□□□ 0.04
CSF3R-208ENST00000466138 PALLDQ8WX93 1383 aa15.27■□□□□ 0.04
CSF3R-208ENST00000466138 GNPATO15228 680 aa15.27■□□□□ 0.04
CSF3R-208ENST00000466138 LDHDQ86WU2 507 aa15.27■□□□□ 0.04
CSF3R-208ENST00000466138 SLC4A1APQ9BWU0 796 aaKnown RBP15.27■□□□□ 0.04
CSF3R-208ENST00000466138 KDM6AO15550 1401 aaPredicted RBP15.26■□□□□ 0.03
CSF3R-208ENST00000466138 DDNO94850 711 aaPredicted RBP15.26■□□□□ 0.03
CSF3R-208ENST00000466138 PARP3Q9Y6F1 533 aa15.26■□□□□ 0.03
CSF3R-208ENST00000466138 RAB3GAP2Q9H2M9 1393 aa15.25■□□□□ 0.03
CSF3R-208ENST00000466138 UBR3Q6ZT12 1888 aa15.25■□□□□ 0.03
CSF3R-208ENST00000466138 TAF1LQ8IZX4 1826 aa15.25■□□□□ 0.03
CSF3R-208ENST00000466138 ECE1P42892 770 aa15.24■□□□□ 0.03
CSF3R-208ENST00000466138 TMF1P82094 1093 aa15.24■□□□□ 0.03
CSF3R-208ENST00000466138 ANKRD24Q8TF21 1146 aa15.24■□□□□ 0.03
CSF3R-208ENST00000466138 NSD3Q9BZ95 1437 aa15.24■□□□□ 0.03
CSF3R-208ENST00000466138 MAP1SQ66K74 1059 aaPredicted RBP15.23■□□□□ 0.03
CSF3R-208ENST00000466138 KCNH5Q8NCM2 988 aa15.23■□□□□ 0.03
CSF3R-208ENST00000466138 LINC00116Q8NCU8 138 aa15.23■□□□□ 0.03
CSF3R-208ENST00000466138 FMR1Q06787 632 aaKnown RBP eCLIP15.21■□□□□ 0.03
CSF3R-208ENST00000466138 ERFEQ4G0M1 354 aa15.21■□□□□ 0.03
CSF3R-208ENST00000466138 MPRIPQ6WCQ1 1025 aa15.21■□□□□ 0.03
CSF3R-208ENST00000466138 NLGN1Q8N2Q7 840 aa15.21■□□□□ 0.03
CSF3R-208ENST00000466138 CNTROBQ8N137 903 aa15.2■□□□□ 0.02
CSF3R-208ENST00000466138 THSD7BQ9C0I4 1608 aa15.19■□□□□ 0.02
CSF3R-208ENST00000466138 LTV1Q96GA3 475 aaPredicted RBP15.19■□□□□ 0.02
CSF3R-208ENST00000466138 TAF1DQ9H5J8 278 aaPredicted RBP15.19■□□□□ 0.02
CSF3R-208ENST00000466138 C4AP0C0L4 1744 aa15.19■□□□□ 0.02
CSF3R-208ENST00000466138 NFKBIEO00221 500 aa15.18■□□□□ 0.02
CSF3R-208ENST00000466138 CA12O43570 354 aa15.18■□□□□ 0.02
CSF3R-208ENST00000466138 HMGB2P26583 209 aaKnown RBP15.18■□□□□ 0.02
CSF3R-208ENST00000466138 SRPK2P78362 688 aaKnown RBP15.18■□□□□ 0.02
CSF3R-208ENST00000466138 NBPF1Q3BBV0 1214 aa15.18■□□□□ 0.02
CSF3R-208ENST00000466138 ADGRB1O14514 1584 aa15.18■□□□□ 0.02
CSF3R-208ENST00000466138 ADAMTS7Q9UKP4 1686 aa15.18■□□□□ 0.02
CSF3R-208ENST00000466138 CCDC88AQ3V6T2 1871 aa15.18■□□□□ 0.02
CSF3R-208ENST00000466138 ZCRB1Q8TBF4 217 aaKnown RBP15.17■□□□□ 0.02
CSF3R-208ENST00000466138 COLQQ9Y215 455 aaPredicted RBP15.17■□□□□ 0.02
CSF3R-208ENST00000466138 IQCA1LA6NCM1 817 aa15.15■□□□□ 0.02
CSF3R-208ENST00000466138 TRAPPC3LQ5T215 181 aa15.15■□□□□ 0.02
CSF3R-208ENST00000466138 CIAPIN1Q6FI81 312 aa15.15■□□□□ 0.02
CSF3R-208ENST00000466138 CABP2Q9NPB3 220 aa15.15■□□□□ 0.02
CSF3R-208ENST00000466138 MAP2K2P36507 400 aa15.14■□□□□ 0.01
CSF3R-208ENST00000466138 CABP1Q9NZU7 370 aa15.14■□□□□ 0.01
CSF3R-208ENST00000466138 GYS1P13807 737 aa15.13■□□□□ 0.01
CSF3R-208ENST00000466138 DDX21Q9NR30 783 aaKnown RBP eCLIP15.13■□□□□ 0.01
CSF3R-208ENST00000466138 HPS5Q9UPZ3 1129 aa15.13■□□□□ 0.01
CSF3R-208ENST00000466138 SZT2Q5T011 3432 aa15.12■□□□□ 0.01
CSF3R-208ENST00000466138 NFAT5O94916 1531 aa15.12■□□□□ 0.01
CSF3R-208ENST00000466138 MNX1P50219 401 aaPredicted RBP15.11■□□□□ 0.01
CSF3R-208ENST00000466138 ITPK1Q13572 414 aa15.11■□□□□ 0.01
CSF3R-208ENST00000466138 A0A0C4DFX4 3053 aa15.1■□□□□ 0.01
CSF3R-208ENST00000466138 ARHGEF1Q92888 912 aaKnown RBP15.1■□□□□ 0.01
CSF3R-208ENST00000466138 SMARCC1Q92922 1105 aaPredicted RBP15.1■□□□□ 0.01
CSF3R-208ENST00000466138 LOC102724428A0A0B4J2F2 783 aa15.09■□□□□ 0.01
CSF3R-208ENST00000466138 BRPF1P55201 1214 aaPredicted RBP15.09■□□□□ 0.01
CSF3R-208ENST00000466138 SIK1P57059 783 aa15.09■□□□□ 0.01
CSF3R-208ENST00000466138 MPHOSPH9Q99550 1183 aa15.09■□□□□ 0.01
CSF3R-208ENST00000466138 RTCBQ9Y3I0 505 aaKnown RBP15.09■□□□□ 0.01
CSF3R-208ENST00000466138 MEGF6O75095 1541 aa15.08■□□□□ 0.01
CSF3R-208ENST00000466138 RFC4P35249 363 aa15.08■□□□□ 0
CSF3R-208ENST00000466138 ATP6V1AP38606 617 aa15.08■□□□□ 0
CSF3R-208ENST00000466138 DDR1Q08345 913 aa15.08■□□□□ 0
CSF3R-208ENST00000466138 TTC21BQ7Z4L5 1316 aa15.08■□□□□ 0
CSF3R-208ENST00000466138 EPHX2P34913 555 aa15.07■□□□□ 0
CSF3R-208ENST00000466138 ZIC5Q96T25 663 aa15.07■□□□□ 0
CSF3R-208ENST00000466138 HACL1Q9UJ83 578 aa15.07■□□□□ 0
CSF3R-208ENST00000466138 KDM2AQ9Y2K7 1162 aa15.07■□□□□ 0
CSF3R-208ENST00000466138 CUL9Q8IWT3 2517 aa15.07■□□□□ 0
CSF3R-208ENST00000466138 TRAF5O00463 557 aa15.06■□□□□ 0
CSF3R-208ENST00000466138 TTLL6Q8N841 843 aa15.06■□□□□ 0
CSF3R-208ENST00000466138 COL25A1Q9BXS0 654 aaPredicted RBP15.06■□□□□ 0
CSF3R-208ENST00000466138 TLL2Q9Y6L7 1015 aa15.06■□□□□ 0
CSF3R-208ENST00000466138 CST9Q5W186 159 aa15.05■□□□□ -0
CSF3R-208ENST00000466138 CTU1Q7Z7A3 348 aaKnown RBP15.04■□□□□ -0
CSF3R-208ENST00000466138 SRP68Q9UHB9 627 aaKnown RBP15.04■□□□□ -0
CSF3R-208ENST00000466138 RNF123Q5XPI4 1314 aa15.03■□□□□ -0
CSF3R-208ENST00000466138 C21orf2O43822 256 aa15.03■□□□□ -0
CSF3R-208ENST00000466138 FKBP8Q14318 412 aa15.03■□□□□ -0
CSF3R-208ENST00000466138 PIGBQ92521 554 aa15.03■□□□□ -0
CSF3R-208ENST00000466138 L3MBTL3Q96JM7 780 aaPredicted RBP15.02■□□□□ -0
CSF3R-208ENST00000466138 PNMA8AQ86V59 439 aaPredicted RBP15□□□□□ -0.01
CSF3R-208ENST00000466138 C2CD5Q86YS7 1000 aa15□□□□□ -0.01
CSF3R-208ENST00000466138 SCN4AP35499 1836 aa14.99□□□□□ -0.01
CSF3R-208ENST00000466138 ZNF541Q9H0D2 1346 aa14.99□□□□□ -0.01
CSF3R-208ENST00000466138 ADAMTSL1Q8N6G6 1762 aa14.99□□□□□ -0.01
CSF3R-208ENST00000466138 TRPA1O75762 1119 aa14.99□□□□□ -0.01
CSF3R-208ENST00000466138 BICDL1Q6ZP65 573 aa14.99□□□□□ -0.01
CSF3R-208ENST00000466138 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.99□□□□□ -0.01
CSF3R-208ENST00000466138 USHBP1Q8N6Y0 703 aa14.99□□□□□ -0.01
CSF3R-208ENST00000466138 LTN1O94822 1766 aa14.98□□□□□ -0.01
CSF3R-208ENST00000466138 COL6A3P12111 3177 aa14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms