RNA–Protein interactions for RNA: ENST00000465903.5

SMC4-206, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 849 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-206ENST00000465903 MRC1P22897 1456 aa34.53■■■■□ 3.12
SMC4-206ENST00000465903 QSER1Q2KHR3 1735 aa34.53■■■■□ 3.12
SMC4-206ENST00000465903 MAP3K5Q99683 1374 aa34.53■■■■□ 3.12
SMC4-206ENST00000465903 SLC52A2Q9HAB3 445 aa34.53■■■■□ 3.12
SMC4-206ENST00000465903 LOC102724428A0A0B4J2F2 783 aa34.52■■■■□ 3.12
SMC4-206ENST00000465903 GNAT3A8MTJ3 354 aa34.52■■■■□ 3.12
SMC4-206ENST00000465903 SIK1P57059 783 aa34.52■■■■□ 3.12
SMC4-206ENST00000465903 PLEKHF1Q96S99 279 aa34.52■■■■□ 3.12
SMC4-206ENST00000465903 IL17REQ8NFR9 667 aa34.51■■■■□ 3.12
SMC4-206ENST00000465903 DLG5Q8TDM6 1919 aa34.5■■■■□ 3.11
SMC4-206ENST00000465903 LRP5O75197 1615 aa34.48■■■■□ 3.11
SMC4-206ENST00000465903 ZNF831Q5JPB2 1677 aa34.48■■■■□ 3.11
SMC4-206ENST00000465903 SLC4A9Q96Q91 983 aa34.48■■■■□ 3.11
SMC4-206ENST00000465903 SIPA1L3O60292 1781 aaPredicted RBP34.48■■■■□ 3.11
SMC4-206ENST00000465903 ITPK1Q13572 414 aa34.46■■■■□ 3.11
SMC4-206ENST00000465903 C4BP0C0L5 1744 aa34.46■■■■□ 3.11
SMC4-206ENST00000465903 SRCAPQ6ZRS2 3230 aa34.45■■■■□ 3.11
SMC4-206ENST00000465903 ATP6V1AP38606 617 aa34.44■■■■□ 3.1
SMC4-206ENST00000465903 LINC00116Q8NCU8 138 aa34.43■■■■□ 3.1
SMC4-206ENST00000465903 RBM42Q9BTD8 480 aaKnown RBP34.43■■■■□ 3.1
SMC4-206ENST00000465903 CEMIPQ8WUJ3 1361 aa34.42■■■■□ 3.1
SMC4-206ENST00000465903 PNPLA7Q6ZV29 1317 aa34.42■■■■□ 3.1
SMC4-206ENST00000465903 TFCP2L1Q9NZI6 479 aa34.42■■■■□ 3.1
SMC4-206ENST00000465903 PNNQ9H307 717 aaKnown RBP34.41■■■■□ 3.1
SMC4-206ENST00000465903 UBR3Q6ZT12 1888 aa34.4■■■■□ 3.1
SMC4-206ENST00000465903 HMGB2P26583 209 aaKnown RBP34.4■■■■□ 3.1
SMC4-206ENST00000465903 SLC39A6Q13433 755 aa34.4■■■■□ 3.1
SMC4-206ENST00000465903 COL5A3P25940 1745 aaPredicted RBP34.4■■■■□ 3.1
SMC4-206ENST00000465903 PTCD1O75127 700 aaKnown RBP34.38■■■■□ 3.09
SMC4-206ENST00000465903 NEFMP07197 916 aa34.38■■■■□ 3.09
SMC4-206ENST00000465903 MYH14Q7Z406 1995 aaKnown RBP34.37■■■■□ 3.09
SMC4-206ENST00000465903 HTATSF1O43719 755 aaKnown RBP34.37■■■■□ 3.09
SMC4-206ENST00000465903 UBR2Q8IWV8 1755 aa34.36■■■■□ 3.09
SMC4-206ENST00000465903 TJP1Q07157 1748 aa34.36■■■■□ 3.09
SMC4-206ENST00000465903 ZBTB7AO95365 584 aa34.36■■■■□ 3.09
SMC4-206ENST00000465903 TEFQ10587 303 aa34.36■■■■□ 3.09
SMC4-206ENST00000465903 CCDC184Q52MB2 194 aa34.36■■■■□ 3.09
SMC4-206ENST00000465903 MCM10Q7L590 875 aa34.36■■■■□ 3.09
SMC4-206ENST00000465903 ADAMTS8Q9UP79 889 aa34.36■■■■□ 3.09
SMC4-206ENST00000465903 CICQ96RK0 1608 aaPredicted RBP34.35■■■■□ 3.09
SMC4-206ENST00000465903 DCTN1Q14203 1278 aa34.35■■■■□ 3.09
SMC4-206ENST00000465903 NFE2L2Q16236 605 aa34.35■■■■□ 3.09
SMC4-206ENST00000465903 SPON1Q9HCB6 807 aa34.35■■■■□ 3.09
SMC4-206ENST00000465903 KCPQ6ZWJ8 1503 aa34.35■■■■□ 3.09
SMC4-206ENST00000465903 ANP32CO43423 234 aa34.34■■■■□ 3.09
SMC4-206ENST00000465903 AMIGO3Q86WK7 504 aa34.34■■■■□ 3.09
SMC4-206ENST00000465903 COL23A1Q86Y22 540 aaPredicted RBP34.34■■■■□ 3.09
SMC4-206ENST00000465903 RTF1Q92541 710 aaKnown RBP34.34■■■■□ 3.09
SMC4-206ENST00000465903 MAPK8IP3Q9UPT6 1336 aa34.33■■■■□ 3.09
SMC4-206ENST00000465903 WDR43Q15061 677 aaKnown RBP eCLIP34.33■■■■□ 3.09
SMC4-206ENST00000465903 AK7Q96M32 723 aa34.32■■■■□ 3.08
SMC4-206ENST00000465903 ATF5Q9Y2D1 282 aaPredicted RBP34.32■■■■□ 3.08
SMC4-206ENST00000465903 SMIM5Q71RC9 77 aa34.3■■■■□ 3.08
SMC4-206ENST00000465903 CCDC146Q8IYE0 955 aa34.3■■■■□ 3.08
SMC4-206ENST00000465903 COL24A1Q17RW2 1714 aa34.3■■■■□ 3.08
SMC4-206ENST00000465903 SLC16A10Q8TF71 515 aa34.29■■■■□ 3.08
SMC4-206ENST00000465903 MTFR1LQ9H019 292 aa34.29■■■■□ 3.08
SMC4-206ENST00000465903 PTGER2P43116 358 aa34.27■■■■□ 3.08
SMC4-206ENST00000465903 RC3H1Q5TC82 1133 aaKnown RBP34.27■■■■□ 3.08
SMC4-206ENST00000465903 ZNF790Q6PG37 636 aa34.27■■■■□ 3.08
SMC4-206ENST00000465903 SGIP1Q9BQI5 828 aa34.26■■■■□ 3.08
SMC4-206ENST00000465903 CNTNAP4Q9C0A0 1308 aa34.26■■■■□ 3.07
SMC4-206ENST00000465903 KCNQ3O43525 872 aa34.25■■■■□ 3.07
SMC4-206ENST00000465903 TMPOP42166 694 aaKnown RBP34.25■■■■□ 3.07
SMC4-206ENST00000465903 DNAJC10Q8IXB1 793 aa34.25■■■■□ 3.07
SMC4-206ENST00000465903 FLAD1Q8NFF5 587 aa34.25■■■■□ 3.07
SMC4-206ENST00000465903 RUNDC1Q96C34 613 aa34.25■■■■□ 3.07
SMC4-206ENST00000465903 BTBD11A6QL63 1104 aa34.24■■■■□ 3.07
SMC4-206ENST00000465903 GNPATO15228 680 aa34.24■■■■□ 3.07
SMC4-206ENST00000465903 TTC5Q8N0Z6 440 aa34.24■■■■□ 3.07
SMC4-206ENST00000465903 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP34.23■■■■□ 3.07
SMC4-206ENST00000465903 RIPK4P57078 832 aa34.23■■■■□ 3.07
SMC4-206ENST00000465903 ZNF496Q96IT1 587 aaPredicted RBP34.23■■■■□ 3.07
SMC4-206ENST00000465903 MSH5O43196 834 aa34.22■■■■□ 3.07
SMC4-206ENST00000465903 PHF14O94880 888 aa34.22■■■■□ 3.07
SMC4-206ENST00000465903 SSFA2P28290 1259 aa34.22■■■■□ 3.07
SMC4-206ENST00000465903 VSIG10Q8N0Z9 540 aa34.22■■■■□ 3.07
SMC4-206ENST00000465903 THUMPD2Q9BTF0 503 aaKnown RBP34.21■■■■□ 3.07
SMC4-206ENST00000465903 CRKLP46109 303 aaKnown RBP34.2■■■■□ 3.07
SMC4-206ENST00000465903 TAF7Q15545 349 aaPredicted RBP34.2■■■■□ 3.07
SMC4-206ENST00000465903 RPS6KA4O75676 772 aa34.19■■■■□ 3.06
SMC4-206ENST00000465903 RRP7AQ9Y3A4 280 aaKnown RBP34.19■■■■□ 3.06
SMC4-206ENST00000465903 CYP19A1P11511 503 aaPredicted RBP34.18■■■■□ 3.06
SMC4-206ENST00000465903 INTS5Q6P9B9 1019 aaKnown RBP34.18■■■■□ 3.06
SMC4-206ENST00000465903 RTCBQ9Y3I0 505 aaKnown RBP34.18■■■■□ 3.06
SMC4-206ENST00000465903 HEG1Q9ULI3 1381 aa34.18■■■■□ 3.06
SMC4-206ENST00000465903 KDM3BQ7LBC6 1761 aa34.17■■■■□ 3.06
SMC4-206ENST00000465903 PNISRQ8TF01 805 aaKnown RBP34.16■■■■□ 3.06
SMC4-206ENST00000465903 FMNL2Q96PY5 1086 aa34.16■■■■□ 3.06
SMC4-206ENST00000465903 MIS18AQ9NYP9 233 aa34.16■■■■□ 3.06
SMC4-206ENST00000465903 MRS2Q9HD23 443 aa34.15■■■■□ 3.06
SMC4-206ENST00000465903 NEUROD2Q15784 382 aa34.14■■■■□ 3.06
SMC4-206ENST00000465903 TRAPPC3LQ5T215 181 aa34.13■■■■□ 3.05
SMC4-206ENST00000465903 ARHGEF1Q92888 912 aaKnown RBP34.13■■■■□ 3.05
SMC4-206ENST00000465903 CCDC87Q9NVE4 849 aa34.13■■■■□ 3.05
SMC4-206ENST00000465903 PPP1R1BQ9UD71 204 aaPredicted RBP34.13■■■■□ 3.05
SMC4-206ENST00000465903 C4AP0C0L4 1744 aa34.13■■■■□ 3.05
SMC4-206ENST00000465903 TRIM35Q9UPQ4 493 aa34.12■■■■□ 3.05
SMC4-206ENST00000465903 ADRA2BP18089 450 aa34.1■■■■□ 3.05
SMC4-206ENST00000465903 LMOD3Q0VAK6 560 aa34.1■■■■□ 3.05
Retrieved 100 of 20,778 RNA–protein pairs in 94.2 ms