RNA–Protein interactions for RNA: ENST00000465408.1

UBE4B-205, Transcript of ubiquitination factor E4B, humanhuman

TSL 3

Gene UBE4B, Length 355 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-205ENST00000465408 CRBNQ96SW2 442 aa10.81□□□□□ -0.68
UBE4B-205ENST00000465408 MAPK8IP3Q9UPT6 1336 aa10.81□□□□□ -0.68
UBE4B-205ENST00000465408 PAK3O75914 559 aaPredicted RBP10.8□□□□□ -0.68
UBE4B-205ENST00000465408 CCDC136Q96JN2 1154 aa10.8□□□□□ -0.68
UBE4B-205ENST00000465408 IGSF1Q8N6C5 1336 aa10.8□□□□□ -0.68
UBE4B-205ENST00000465408 CRB1P82279 1406 aa10.79□□□□□ -0.68
UBE4B-205ENST00000465408 TMPOP42166 694 aaKnown RBP10.79□□□□□ -0.68
UBE4B-205ENST00000465408 CCDC27Q2M243 656 aa10.79□□□□□ -0.68
UBE4B-205ENST00000465408 C20orf194Q5TEA3 1177 aa10.79□□□□□ -0.68
UBE4B-205ENST00000465408 MSL1Q68DK7 614 aa10.79□□□□□ -0.68
UBE4B-205ENST00000465408 WDR63Q8IWG1 891 aa10.79□□□□□ -0.68
UBE4B-205ENST00000465408 NGDNQ8NEJ9 315 aaKnown RBP10.79□□□□□ -0.68
UBE4B-205ENST00000465408 COL5A2P05997 1499 aaPredicted RBP10.79□□□□□ -0.68
UBE4B-205ENST00000465408 NHSQ6T4R5 1651 aa10.79□□□□□ -0.68
UBE4B-205ENST00000465408 ANKARQ7Z5J8 1434 aa10.78□□□□□ -0.68
UBE4B-205ENST00000465408 HMOX1P09601 288 aa10.78□□□□□ -0.68
UBE4B-205ENST00000465408 IL13P35225 146 aa10.78□□□□□ -0.68
UBE4B-205ENST00000465408 CTCFP49711 727 aaPredicted RBP10.78□□□□□ -0.68
UBE4B-205ENST00000465408 SMC1BQ8NDV3 1235 aa10.78□□□□□ -0.68
UBE4B-205ENST00000465408 SOX12O15370 315 aa10.77□□□□□ -0.69
UBE4B-205ENST00000465408 PRKAR2BP31323 418 aa10.77□□□□□ -0.69
UBE4B-205ENST00000465408 LBX1P52954 281 aa10.77□□□□□ -0.69
UBE4B-205ENST00000465408 NUTM2GQ5VZR2 741 aa10.77□□□□□ -0.69
UBE4B-205ENST00000465408 RSPH6AQ9H0K4 717 aa10.77□□□□□ -0.69
UBE4B-205ENST00000465408 TFCP2L1Q9NZI6 479 aa10.77□□□□□ -0.69
UBE4B-205ENST00000465408 WNK3Q9BYP7 1800 aa10.77□□□□□ -0.69
UBE4B-205ENST00000465408 C10orf71Q711Q0 1435 aa10.76□□□□□ -0.69
UBE4B-205ENST00000465408 KCPQ6ZWJ8 1503 aa10.76□□□□□ -0.69
UBE4B-205ENST00000465408 BCAR3O75815 825 aa10.76□□□□□ -0.69
UBE4B-205ENST00000465408 NCBP3Q53F19 620 aaKnown RBP10.76□□□□□ -0.69
UBE4B-205ENST00000465408 ACSBG1Q96GR2 724 aa10.76□□□□□ -0.69
UBE4B-205ENST00000465408 TRIM35Q9UPQ4 493 aa10.76□□□□□ -0.69
UBE4B-205ENST00000465408 TTC21AQ8NDW8 1320 aa10.76□□□□□ -0.69
UBE4B-205ENST00000465408 FCHSD2O94868 740 aa10.75□□□□□ -0.69
UBE4B-205ENST00000465408 RIPK4P57078 832 aa10.75□□□□□ -0.69
UBE4B-205ENST00000465408 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.75□□□□□ -0.69
UBE4B-205ENST00000465408 PNNQ9H307 717 aaKnown RBP10.75□□□□□ -0.69
UBE4B-205ENST00000465408 MYH16Q9H6N6 1097 aa10.75□□□□□ -0.69
UBE4B-205ENST00000465408 MKRN1Q9UHC7 482 aaKnown RBP10.75□□□□□ -0.69
UBE4B-205ENST00000465408 CPDO75976 1380 aa10.75□□□□□ -0.69
UBE4B-205ENST00000465408 USP31Q70CQ4 1352 aa10.75□□□□□ -0.69
UBE4B-205ENST00000465408 BTAF1O14981 1849 aa10.74□□□□□ -0.69
UBE4B-205ENST00000465408 TSR2Q969E8 191 aaKnown RBP10.74□□□□□ -0.69
UBE4B-205ENST00000465408 PHACTR3Q96KR7 559 aa10.74□□□□□ -0.69
UBE4B-205ENST00000465408 RRAGCQ9HB90 399 aa10.74□□□□□ -0.69
UBE4B-205ENST00000465408 PXDNLA1KZ92 1463 aa10.74□□□□□ -0.69
UBE4B-205ENST00000465408 NEFMP07197 916 aa10.73□□□□□ -0.69
UBE4B-205ENST00000465408 KCNQ4P56696 695 aa10.73□□□□□ -0.69
UBE4B-205ENST00000465408 EIF4A2Q14240 407 aaKnown RBP10.73□□□□□ -0.69
UBE4B-205ENST00000465408 NFE2L2Q16236 605 aa10.73□□□□□ -0.69
UBE4B-205ENST00000465408 FANCIQ9NVI1 1328 aa10.73□□□□□ -0.69
UBE4B-205ENST00000465408 MSH5O43196 834 aa10.72□□□□□ -0.69
UBE4B-205ENST00000465408 CANXP27824 592 aaKnown RBP10.72□□□□□ -0.69
UBE4B-205ENST00000465408 COL23A1Q86Y22 540 aaPredicted RBP10.72□□□□□ -0.69
UBE4B-205ENST00000465408 AIDAQ96BJ3 306 aa10.72□□□□□ -0.69
UBE4B-205ENST00000465408 MAP3K19Q56UN5 1328 aa10.72□□□□□ -0.69
UBE4B-205ENST00000465408 PIK3C2AO00443 1686 aa10.72□□□□□ -0.69
UBE4B-205ENST00000465408 MAP2P11137 1827 aaKnown RBP10.72□□□□□ -0.69
UBE4B-205ENST00000465408 RARSP54136 660 aaKnown RBP10.71□□□□□ -0.69
UBE4B-205ENST00000465408 NLRP6P59044 892 aa10.71□□□□□ -0.69
UBE4B-205ENST00000465408 IL16Q14005 1332 aa10.71□□□□□ -0.69
UBE4B-205ENST00000465408 HSP90AB2PQ58FF8 381 aa10.71□□□□□ -0.69
UBE4B-205ENST00000465408 AEBP1Q8IUX7 1158 aa10.71□□□□□ -0.69
UBE4B-205ENST00000465408 CFAP44Q96MT7 982 aa10.71□□□□□ -0.69
UBE4B-205ENST00000465408 BCL2L13Q9BXK5 485 aa10.71□□□□□ -0.69
UBE4B-205ENST00000465408 TNRC6CQ9HCJ0 1690 aaKnown RBP10.7□□□□□ -0.7
UBE4B-205ENST00000465408 HSPA8P11142 646 aaKnown RBP10.7□□□□□ -0.7
UBE4B-205ENST00000465408 KCNA4P22459 653 aa10.7□□□□□ -0.7
UBE4B-205ENST00000465408 EXOSC9Q06265 439 aaKnown RBP10.7□□□□□ -0.7
UBE4B-205ENST00000465408 FRAT1Q92837 279 aaPredicted RBP10.7□□□□□ -0.7
UBE4B-205ENST00000465408 THUMPD2Q9BTF0 503 aaKnown RBP10.7□□□□□ -0.7
UBE4B-205ENST00000465408 KDM2BQ8NHM5 1336 aa10.69□□□□□ -0.7
UBE4B-205ENST00000465408 SLC27A3Q5K4L6 730 aa10.69□□□□□ -0.7
UBE4B-205ENST00000465408 PRPF38BQ5VTL8 546 aaKnown RBP10.69□□□□□ -0.7
UBE4B-205ENST00000465408 C9orf131Q5VYM1 1079 aa10.69□□□□□ -0.7
UBE4B-205ENST00000465408 SULT6B1Q6IMI4 303 aa10.69□□□□□ -0.7
UBE4B-205ENST00000465408 TOM1L2Q6ZVM7 507 aa10.69□□□□□ -0.7
UBE4B-205ENST00000465408 TNNQ9UQP3 1299 aa10.69□□□□□ -0.7
UBE4B-205ENST00000465408 LAS1LQ9Y4W2 734 aaKnown RBP10.69□□□□□ -0.7
UBE4B-205ENST00000465408 PLEKHG2Q9H7P9 1386 aa10.68□□□□□ -0.7
UBE4B-205ENST00000465408 PKD1L3Q7Z443 1732 aa10.68□□□□□ -0.7
UBE4B-205ENST00000465408 AMPHP49418 695 aa10.68□□□□□ -0.7
UBE4B-205ENST00000465408 ABTB2Q8N961 1025 aa10.68□□□□□ -0.7
UBE4B-205ENST00000465408 PANK1Q8TE04 598 aa10.68□□□□□ -0.7
UBE4B-205ENST00000465408 WBP1LQ9NX94 342 aa10.68□□□□□ -0.7
UBE4B-205ENST00000465408 RBM19Q9Y4C8 960 aaKnown RBP10.68□□□□□ -0.7
UBE4B-205ENST00000465408 FLT4P35916 1363 aa10.67□□□□□ -0.7
UBE4B-205ENST00000465408 ARHGAP27Q6ZUM4 889 aa10.67□□□□□ -0.7
UBE4B-205ENST00000465408 CDCA7Q9BWT1 371 aaPredicted RBP10.67□□□□□ -0.7
UBE4B-205ENST00000465408 EXOC5O00471 708 aa10.66□□□□□ -0.7
UBE4B-205ENST00000465408 COG6Q9Y2V7 657 aa10.66□□□□□ -0.7
UBE4B-205ENST00000465408 CNTNAP1P78357 1384 aa10.65□□□□□ -0.7
UBE4B-205ENST00000465408 CT47B1P0C2W7 299 aaPredicted RBP10.65□□□□□ -0.7
UBE4B-205ENST00000465408 LMOD3Q0VAK6 560 aa10.65□□□□□ -0.7
UBE4B-205ENST00000465408 DCTN1Q14203 1278 aa10.65□□□□□ -0.7
UBE4B-205ENST00000465408 PDE3AQ14432 1141 aa10.65□□□□□ -0.7
UBE4B-205ENST00000465408 PIAS4Q8N2W9 510 aaPredicted RBP10.65□□□□□ -0.7
UBE4B-205ENST00000465408 CREBZFQ9NS37 354 aa10.65□□□□□ -0.7
UBE4B-205ENST00000465408 SMC4Q9NTJ3 1288 aa10.65□□□□□ -0.7
UBE4B-205ENST00000465408 USP54Q70EL1 1684 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms