RNA–Protein interactions for RNA: ENST00000464987.5

TSPAN4-210, Transcript of tetraspanin 4, humanhuman

TSL 5

Gene TSPAN4, Length 2,205 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-210ENST00000464987 GNAI2P04899 355 aa23.16■■□□□ 1.3
TSPAN4-210ENST00000464987 PHAXQ9H814 394 aaKnown RBP23.16■■□□□ 1.3
TSPAN4-210ENST00000464987 BRPF3Q9ULD4 1205 aa23.16■■□□□ 1.3
TSPAN4-210ENST00000464987 ADAMTSL3P82987 1691 aa23.16■■□□□ 1.3
TSPAN4-210ENST00000464987 PNMA6EA0A0J9YXQ4 647 aa23.16■■□□□ 1.3
TSPAN4-210ENST00000464987 MCM4P33991 863 aa23.16■■□□□ 1.3
TSPAN4-210ENST00000464987 HMMRO75330 724 aa23.15■■□□□ 1.3
TSPAN4-210ENST00000464987 N4BP2Q86UW6 1770 aaPredicted RBP23.15■■□□□ 1.3
TSPAN4-210ENST00000464987 CEMIPQ8WUJ3 1361 aa23.15■■□□□ 1.3
TSPAN4-210ENST00000464987 FOXD4L1Q9NU39 408 aa23.14■■□□□ 1.3
TSPAN4-210ENST00000464987 HSP90AB1P08238 724 aaKnown RBP23.14■■□□□ 1.29
TSPAN4-210ENST00000464987 KCNQ3O43525 872 aa23.13■■□□□ 1.29
TSPAN4-210ENST00000464987 HDGFL1Q5TGJ6 251 aa23.13■■□□□ 1.29
TSPAN4-210ENST00000464987 TSHZ3Q63HK5 1081 aa23.13■■□□□ 1.29
TSPAN4-210ENST00000464987 KDM3BQ7LBC6 1761 aa23.12■■□□□ 1.29
TSPAN4-210ENST00000464987 EIF2S2P20042 333 aaKnown RBP23.12■■□□□ 1.29
TSPAN4-210ENST00000464987 USP26Q9BXU7 913 aa23.12■■□□□ 1.29
TSPAN4-210ENST00000464987 BABAM1Q9NWV8 329 aa23.12■■□□□ 1.29
TSPAN4-210ENST00000464987 NPHP4O75161 1426 aaPredicted RBP23.11■■□□□ 1.29
TSPAN4-210ENST00000464987 MED1Q15648 1581 aaPredicted RBP23.11■■□□□ 1.29
TSPAN4-210ENST00000464987 LRRFIP2Q9Y608 721 aaKnown RBP23.11■■□□□ 1.29
TSPAN4-210ENST00000464987 AK9Q5TCS8 1911 aa23.11■■□□□ 1.29
TSPAN4-210ENST00000464987 TUBGCP6Q96RT7 1819 aa23.11■■□□□ 1.29
TSPAN4-210ENST00000464987 PHRF1Q9P1Y6 1649 aaKnown RBP23.11■■□□□ 1.29
TSPAN4-210ENST00000464987 KCNH5Q8NCM2 988 aa23.1■■□□□ 1.29
TSPAN4-210ENST00000464987 PDE1AP54750 535 aa23.1■■□□□ 1.29
TSPAN4-210ENST00000464987 LMOD2Q6P5Q4 547 aa23.1■■□□□ 1.29
TSPAN4-210ENST00000464987 USP44Q9H0E7 712 aa23.1■■□□□ 1.29
TSPAN4-210ENST00000464987 K7ELQ4 463 aaPredicted RBP23.09■■□□□ 1.29
TSPAN4-210ENST00000464987 GCP02774 474 aa23.09■■□□□ 1.29
TSPAN4-210ENST00000464987 EIF4A1P60842 406 aaKnown RBP23.09■■□□□ 1.29
TSPAN4-210ENST00000464987 LMO7Q8WWI1 1683 aa23.09■■□□□ 1.29
TSPAN4-210ENST00000464987 GNAI3P08754 354 aa23.09■■□□□ 1.29
TSPAN4-210ENST00000464987 ATP8B2P98198 1209 aa23.08■■□□□ 1.29
TSPAN4-210ENST00000464987 MPRIPQ6WCQ1 1025 aa23.08■■□□□ 1.29
TSPAN4-210ENST00000464987 RGPD5Q99666 1765 aa23.08■■□□□ 1.29
TSPAN4-210ENST00000464987 SOS1Q07889 1333 aaPredicted RBP23.08■■□□□ 1.28
TSPAN4-210ENST00000464987 PXDNQ92626 1479 aa23.07■■□□□ 1.28
TSPAN4-210ENST00000464987 ZNF530Q6P9A1 599 aaPredicted RBP23.07■■□□□ 1.28
TSPAN4-210ENST00000464987 OSBPL3Q9H4L5 887 aa23.07■■□□□ 1.28
TSPAN4-210ENST00000464987 SALL3Q9BXA9 1300 aa23.07■■□□□ 1.28
TSPAN4-210ENST00000464987 ANXA1P04083 346 aa23.06■■□□□ 1.28
TSPAN4-210ENST00000464987 ARHGEF25Q86VW2 580 aa23.06■■□□□ 1.28
TSPAN4-210ENST00000464987 TNPO1Q92973 898 aaKnown RBP23.06■■□□□ 1.28
TSPAN4-210ENST00000464987 RTN4Q9NQC3 1192 aaKnown RBP23.06■■□□□ 1.28
TSPAN4-210ENST00000464987 LRRCC1Q9C099 1032 aa23.05■■□□□ 1.28
TSPAN4-210ENST00000464987 CHPF2Q9P2E5 772 aa23.05■■□□□ 1.28
TSPAN4-210ENST00000464987 PXDNLA1KZ92 1463 aa23.05■■□□□ 1.28
TSPAN4-210ENST00000464987 HSP90AA1P07900 732 aaKnown RBP23.05■■□□□ 1.28
TSPAN4-210ENST00000464987 AXIN2Q9Y2T1 843 aa23.05■■□□□ 1.28
TSPAN4-210ENST00000464987 GZF1Q9H116 711 aaPredicted RBP23.04■■□□□ 1.28
TSPAN4-210ENST00000464987 TRPM3Q9HCF6 1732 aaPredicted RBP23.04■■□□□ 1.28
TSPAN4-210ENST00000464987 IBTKQ9P2D0 1353 aaPredicted RBP23.04■■□□□ 1.28
TSPAN4-210ENST00000464987 SLIT3O75094 1523 aa23.04■■□□□ 1.28
TSPAN4-210ENST00000464987 AKAP4Q5JQC9 854 aa23.04■■□□□ 1.28
TSPAN4-210ENST00000464987 BTBD11A6QL63 1104 aa23.03■■□□□ 1.28
TSPAN4-210ENST00000464987 UBTFL1P0CB47 393 aaPredicted RBP23.03■■□□□ 1.28
TSPAN4-210ENST00000464987 TEFQ10587 303 aa23.02■■□□□ 1.28
TSPAN4-210ENST00000464987 ANKRD24Q8TF21 1146 aa23.02■■□□□ 1.28
TSPAN4-210ENST00000464987 RAB3GAP1Q15042 981 aa23.02■■□□□ 1.28
TSPAN4-210ENST00000464987 CASC1Q6TDU7 716 aa23.02■■□□□ 1.28
TSPAN4-210ENST00000464987 TRAK2O60296 914 aa23.01■■□□□ 1.27
TSPAN4-210ENST00000464987 RABEP1Q15276 862 aa23.01■■□□□ 1.27
TSPAN4-210ENST00000464987 PLEKHO1Q53GL0 409 aaPredicted RBP23.01■■□□□ 1.27
TSPAN4-210ENST00000464987 ANO8Q9HCE9 1232 aaPredicted RBP23.01■■□□□ 1.27
TSPAN4-210ENST00000464987 NBPF7P0C2Y1 421 aaPredicted RBP23■■□□□ 1.27
TSPAN4-210ENST00000464987 MX1P20591 662 aa23■■□□□ 1.27
TSPAN4-210ENST00000464987 CIZ1Q9ULV3 898 aaPredicted RBP23■■□□□ 1.27
TSPAN4-210ENST00000464987 PI4KAP2A4QPH2 592 aa23■■□□□ 1.27
TSPAN4-210ENST00000464987 RNMTO43148 476 aaKnown RBP23■■□□□ 1.27
TSPAN4-210ENST00000464987 KRT28Q7Z3Y7 464 aa23■■□□□ 1.27
TSPAN4-210ENST00000464987 PI4KAP1Q8N8J0 262 aa23■■□□□ 1.27
TSPAN4-210ENST00000464987 ARXQ96QS3 562 aa23■■□□□ 1.27
TSPAN4-210ENST00000464987 SRCIN1Q9C0H9 1055 aa23■■□□□ 1.27
TSPAN4-210ENST00000464987 IL1RAPL2Q9NP60 686 aa23■■□□□ 1.27
TSPAN4-210ENST00000464987 PROSER2Q86WR7 435 aaPredicted RBP22.99■■□□□ 1.27
TSPAN4-210ENST00000464987 NCAPD2Q15021 1401 aa22.99■■□□□ 1.27
TSPAN4-210ENST00000464987 PRAMEF22A3QJZ6 481 aa22.98■■□□□ 1.27
TSPAN4-210ENST00000464987 ERC2O15083 957 aa22.98■■□□□ 1.27
TSPAN4-210ENST00000464987 PPP1R42Q7Z4L9 355 aa22.98■■□□□ 1.27
TSPAN4-210ENST00000464987 BEND3Q5T5X7 828 aa22.97■■□□□ 1.27
TSPAN4-210ENST00000464987 UNC5CLQ8IV45 518 aa22.97■■□□□ 1.27
TSPAN4-210ENST00000464987 SSH3Q8TE77 659 aa22.97■■□□□ 1.27
TSPAN4-210ENST00000464987 DNAAF4Q8WXU2 420 aa22.97■■□□□ 1.27
TSPAN4-210ENST00000464987 EIF5BO60841 1220 aaKnown RBP22.96■■□□□ 1.27
TSPAN4-210ENST00000464987 REC8O95072 547 aa22.96■■□□□ 1.27
TSPAN4-210ENST00000464987 HOXB7P09629 217 aa22.96■■□□□ 1.27
TSPAN4-210ENST00000464987 SSFA2P28290 1259 aa22.96■■□□□ 1.27
TSPAN4-210ENST00000464987 AMOTQ4VCS5 1084 aa22.96■■□□□ 1.27
TSPAN4-210ENST00000464987 C1orf141Q5JVX7 400 aa22.96■■□□□ 1.27
TSPAN4-210ENST00000464987 ADCY9O60503 1353 aa22.96■■□□□ 1.27
TSPAN4-210ENST00000464987 C1orf167Q5SNV9 1468 aa22.96■■□□□ 1.27
TSPAN4-210ENST00000464987 CAMTA1Q9Y6Y1 1673 aa22.96■■□□□ 1.27
TSPAN4-210ENST00000464987 ZC3H6P61129 1189 aaKnown RBP22.96■■□□□ 1.27
TSPAN4-210ENST00000464987 DDX17Q92841 729 aaKnown RBP22.96■■□□□ 1.27
TSPAN4-210ENST00000464987 RILPL2Q969X0 211 aa22.96■■□□□ 1.27
TSPAN4-210ENST00000464987 DDX11L8A8MPP1 907 aa22.95■■□□□ 1.26
TSPAN4-210ENST00000464987 PROSER3Q2NL68 480 aa22.95■■□□□ 1.26
TSPAN4-210ENST00000464987 SIPA1L3O60292 1781 aaPredicted RBP22.95■■□□□ 1.26
TSPAN4-210ENST00000464987 TRIM6-TRIM34B2RNG4 842 aa22.94■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms