RNA–Protein interactions for RNA: ENST00000464833.1

CHRD-211, Transcript of chordin, humanhuman

TSL 5

Gene CHRD, Length 1,340 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRD-211ENST00000464833 SIPA1L3O60292 1781 aaPredicted RBP36.56■■■■□ 3.44
CHRD-211ENST00000464833 HTATSF1O43719 755 aaKnown RBP36.55■■■■□ 3.44
CHRD-211ENST00000464833 SMARCC1Q92922 1105 aaPredicted RBP36.55■■■■□ 3.44
CHRD-211ENST00000464833 ASAP1Q9ULH1 1129 aa36.55■■■■□ 3.44
CHRD-211ENST00000464833 ATG3Q9NT62 314 aa36.54■■■■□ 3.44
CHRD-211ENST00000464833 PAPPAQ13219 1627 aa36.51■■■■□ 3.44
CHRD-211ENST00000464833 SLC27A3Q5K4L6 730 aa36.51■■■■□ 3.43
CHRD-211ENST00000464833 RTF1Q92541 710 aaKnown RBP36.51■■■■□ 3.43
CHRD-211ENST00000464833 LRRC4BQ9NT99 713 aa36.51■■■■□ 3.43
CHRD-211ENST00000464833 TMPOP42166 694 aaKnown RBP36.5■■■■□ 3.43
CHRD-211ENST00000464833 MCM10Q7L590 875 aa36.49■■■■□ 3.43
CHRD-211ENST00000464833 TEFQ10587 303 aa36.47■■■■□ 3.43
CHRD-211ENST00000464833 DCTN1Q14203 1278 aa36.47■■■■□ 3.43
CHRD-211ENST00000464833 CCNL1Q9UK58 526 aaPredicted RBP36.46■■■■□ 3.43
CHRD-211ENST00000464833 RIPK4P57078 832 aa36.45■■■■□ 3.43
CHRD-211ENST00000464833 TAF1LQ8IZX4 1826 aa36.44■■■■□ 3.42
CHRD-211ENST00000464833 KCNQ4P56696 695 aa36.44■■■■□ 3.42
CHRD-211ENST00000464833 ZNF831Q5JPB2 1677 aa36.43■■■■□ 3.42
CHRD-211ENST00000464833 CCER2I3L3R5 266 aa36.43■■■■□ 3.42
CHRD-211ENST00000464833 RRP7AQ9Y3A4 280 aaKnown RBP36.43■■■■□ 3.42
CHRD-211ENST00000464833 LOC102724428A0A0B4J2F2 783 aa36.42■■■■□ 3.42
CHRD-211ENST00000464833 SIK1P57059 783 aa36.42■■■■□ 3.42
CHRD-211ENST00000464833 C5P01031 1676 aa36.42■■■■□ 3.42
CHRD-211ENST00000464833 UBR2Q8IWV8 1755 aa36.41■■■■□ 3.42
CHRD-211ENST00000464833 ANO8Q9HCE9 1232 aaPredicted RBP36.41■■■■□ 3.42
CHRD-211ENST00000464833 APAF1O14727 1248 aa36.39■■■■□ 3.42
CHRD-211ENST00000464833 NBPF14Q5TI25 921 aa36.39■■■■□ 3.42
CHRD-211ENST00000464833 LMOD3Q0VAK6 560 aa36.38■■■■□ 3.41
CHRD-211ENST00000464833 SLC39A6Q13433 755 aa36.38■■■■□ 3.41
CHRD-211ENST00000464833 THUMPD2Q9BTF0 503 aaKnown RBP36.38■■■■□ 3.41
CHRD-211ENST00000464833 KCPQ6ZWJ8 1503 aa36.38■■■■□ 3.41
CHRD-211ENST00000464833 NEUROD2Q15784 382 aa36.37■■■■□ 3.41
CHRD-211ENST00000464833 MIER1Q8N108 512 aa36.37■■■■□ 3.41
CHRD-211ENST00000464833 SLC4A9Q96Q91 983 aa36.37■■■■□ 3.41
CHRD-211ENST00000464833 TRIM35Q9UPQ4 493 aa36.36■■■■□ 3.41
CHRD-211ENST00000464833 CICQ96RK0 1608 aaPredicted RBP36.36■■■■□ 3.41
CHRD-211ENST00000464833 FAM9BQ8IZU0 186 aa36.35■■■■□ 3.41
CHRD-211ENST00000464833 PTCD1O75127 700 aaKnown RBP36.34■■■■□ 3.41
CHRD-211ENST00000464833 RBM42Q9BTD8 480 aaKnown RBP36.34■■■■□ 3.41
CHRD-211ENST00000464833 ITPK1Q13572 414 aa36.34■■■■□ 3.41
CHRD-211ENST00000464833 BTBD11A6QL63 1104 aa36.33■■■■□ 3.41
CHRD-211ENST00000464833 ATP6V1AP38606 617 aa36.33■■■■□ 3.41
CHRD-211ENST00000464833 ZNF790Q6PG37 636 aa36.33■■■■□ 3.41
CHRD-211ENST00000464833 C4BP0C0L5 1744 aa36.32■■■■□ 3.4
CHRD-211ENST00000464833 COL5A3P25940 1745 aaPredicted RBP36.32■■■■□ 3.4
CHRD-211ENST00000464833 TJP1Q07157 1748 aa36.32■■■■□ 3.4
CHRD-211ENST00000464833 R3HDM1Q15032 1099 aaKnown RBP36.32■■■■□ 3.4
CHRD-211ENST00000464833 TAF7Q15545 349 aaPredicted RBP36.32■■■■□ 3.4
CHRD-211ENST00000464833 ZNF827Q17R98 1081 aa36.32■■■■□ 3.4
CHRD-211ENST00000464833 AKT1S1Q96B36 256 aa36.32■■■■□ 3.4
CHRD-211ENST00000464833 STK32BQ9NY57 414 aa36.32■■■■□ 3.4
CHRD-211ENST00000464833 SLC15A2Q16348 729 aa36.31■■■■□ 3.4
CHRD-211ENST00000464833 PSDA5PKW4 1024 aaPredicted RBP36.3■■■■□ 3.4
CHRD-211ENST00000464833 HMGB2P26583 209 aaKnown RBP36.3■■■■□ 3.4
CHRD-211ENST00000464833 KDM3BQ7LBC6 1761 aa36.3■■■■□ 3.4
CHRD-211ENST00000464833 TTC5Q8N0Z6 440 aa36.29■■■■□ 3.4
CHRD-211ENST00000464833 LINC00116Q8NCU8 138 aa36.29■■■■□ 3.4
CHRD-211ENST00000464833 TUBGCP6Q96RT7 1819 aa36.28■■■■□ 3.4
CHRD-211ENST00000464833 QSER1Q2KHR3 1735 aa36.27■■■■□ 3.4
CHRD-211ENST00000464833 KCNQ3O43525 872 aa36.27■■■■□ 3.4
CHRD-211ENST00000464833 ZNF496Q96IT1 587 aaPredicted RBP36.26■■■■□ 3.39
CHRD-211ENST00000464833 MIS18AQ9NYP9 233 aa36.24■■■■□ 3.39
CHRD-211ENST00000464833 VSIG10Q8N0Z9 540 aa36.23■■■■□ 3.39
CHRD-211ENST00000464833 HEG1Q9ULI3 1381 aa36.22■■■■□ 3.39
CHRD-211ENST00000464833 CASZ1Q86V15 1759 aa36.21■■■■□ 3.39
CHRD-211ENST00000464833 UBR3Q6ZT12 1888 aa36.21■■■■□ 3.39
CHRD-211ENST00000464833 MYH14Q7Z406 1995 aaKnown RBP36.21■■■■□ 3.39
CHRD-211ENST00000464833 NCBP3Q53F19 620 aaKnown RBP36.21■■■■□ 3.39
CHRD-211ENST00000464833 FMNL2Q96PY5 1086 aa36.21■■■■□ 3.39
CHRD-211ENST00000464833 SENP3-EIF4A1A0A087X0R7 540 aa36.19■■■■□ 3.38
CHRD-211ENST00000464833 CCDC27Q2M243 656 aa36.19■■■■□ 3.38
CHRD-211ENST00000464833 DNAJC10Q8IXB1 793 aa36.19■■■■□ 3.38
CHRD-211ENST00000464833 BABAM1Q9NWV8 329 aa36.18■■■■□ 3.38
CHRD-211ENST00000464833 TFCP2L1Q9NZI6 479 aa36.18■■■■□ 3.38
CHRD-211ENST00000464833 CNTNAP4Q9C0A0 1308 aa36.18■■■■□ 3.38
CHRD-211ENST00000464833 RC3H1Q5TC82 1133 aaKnown RBP36.16■■■■□ 3.38
CHRD-211ENST00000464833 AK7Q96M32 723 aa36.16■■■■□ 3.38
CHRD-211ENST00000464833 PNPLA7Q6ZV29 1317 aa36.15■■■■□ 3.38
CHRD-211ENST00000464833 PDGFDQ9GZP0 370 aaPredicted RBP36.14■■■■□ 3.38
CHRD-211ENST00000464833 TSPYL4Q9UJ04 414 aa36.14■■■■□ 3.38
CHRD-211ENST00000464833 CHL1O00533 1208 aa36.13■■■■□ 3.37
CHRD-211ENST00000464833 AMIGO3Q86WK7 504 aa36.13■■■■□ 3.37
CHRD-211ENST00000464833 CYP19A1P11511 503 aaPredicted RBP36.12■■■■□ 3.37
CHRD-211ENST00000464833 CRKLP46109 303 aaKnown RBP36.12■■■■□ 3.37
CHRD-211ENST00000464833 WWC1Q8IX03 1113 aa36.12■■■■□ 3.37
CHRD-211ENST00000464833 EIF4A1P60842 406 aaKnown RBP36.11■■■■□ 3.37
CHRD-211ENST00000464833 CALD1Q05682 793 aaKnown RBP36.11■■■■□ 3.37
CHRD-211ENST00000464833 GNPATO15228 680 aa36.1■■■■□ 3.37
CHRD-211ENST00000464833 CFAP44Q96MT7 982 aa36.1■■■■□ 3.37
CHRD-211ENST00000464833 TEX13AQ9BXU3 409 aaPredicted RBP36.1■■■■□ 3.37
CHRD-211ENST00000464833 ZNF853P0CG23 659 aa36.09■■■■□ 3.37
CHRD-211ENST00000464833 INTS5Q6P9B9 1019 aaKnown RBP36.09■■■■□ 3.37
CHRD-211ENST00000464833 SNRPA1P09661 255 aaKnown RBP36.08■■■■□ 3.37
CHRD-211ENST00000464833 NGEFQ8N5V2 710 aa36.08■■■■□ 3.37
CHRD-211ENST00000464833 LAS1LQ9Y4W2 734 aaKnown RBP36.08■■■■□ 3.37
CHRD-211ENST00000464833 LAMB4A4D0S4 1761 aa36.07■■■■□ 3.36
CHRD-211ENST00000464833 PRAMEF22A3QJZ6 481 aa36.07■■■■□ 3.36
CHRD-211ENST00000464833 SSFA2P28290 1259 aa36.07■■■■□ 3.36
CHRD-211ENST00000464833 COL23A1Q86Y22 540 aaPredicted RBP36.07■■■■□ 3.36
CHRD-211ENST00000464833 CCDC87Q9NVE4 849 aa36.07■■■■□ 3.36
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms