RNA–Protein interactions for RNA: ENST00000464611.1

ACTB-208, Transcript of actin beta, humanhuman

TSL 5

Gene ACTB, Length 715 nt, Biotype processed transcript, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-208ENST00000464611 KRT28Q7Z3Y7 464 aa10.62□□□□□ -0.71
ACTB-208ENST00000464611 CHMP5Q9NZZ3 219 aa10.62□□□□□ -0.71
ACTB-208ENST00000464611 CIZ1Q9ULV3 898 aaPredicted RBP10.62□□□□□ -0.71
ACTB-208ENST00000464611 CRYBG1Q9Y4K1 1723 aa10.61□□□□□ -0.71
ACTB-208ENST00000464611 EIF4A2Q14240 407 aaKnown RBP10.61□□□□□ -0.71
ACTB-208ENST00000464611 GAS2L2Q8NHY3 880 aa10.61□□□□□ -0.71
ACTB-208ENST00000464611 LRRC59Q96AG4 307 aaKnown RBP10.61□□□□□ -0.71
ACTB-208ENST00000464611 SPATA31A3Q5VYP0 1347 aa10.6□□□□□ -0.71
ACTB-208ENST00000464611 HMMRO75330 724 aa10.6□□□□□ -0.71
ACTB-208ENST00000464611 SLC4A3P48751 1232 aa10.6□□□□□ -0.71
ACTB-208ENST00000464611 HSCBQ8IWL3 235 aa10.6□□□□□ -0.71
ACTB-208ENST00000464611 RTF1Q92541 710 aaKnown RBP10.6□□□□□ -0.71
ACTB-208ENST00000464611 TBC1D2Q9BYX2 928 aa10.6□□□□□ -0.71
ACTB-208ENST00000464611 ANTXR1Q9H6X2 564 aa10.6□□□□□ -0.71
ACTB-208ENST00000464611 DCTPP1Q9H773 170 aa10.6□□□□□ -0.71
ACTB-208ENST00000464611 RTL1A6NKG5 1358 aa10.6□□□□□ -0.71
ACTB-208ENST00000464611 FLT4P35916 1363 aa10.6□□□□□ -0.71
ACTB-208ENST00000464611 JCADQ9P266 1359 aa10.6□□□□□ -0.71
ACTB-208ENST00000464611 SLIT3O75094 1523 aa10.59□□□□□ -0.71
ACTB-208ENST00000464611 MARF1Q9Y4F3 1742 aaKnown RBP10.59□□□□□ -0.71
ACTB-208ENST00000464611 XPCQ01831 940 aaPredicted RBP10.59□□□□□ -0.71
ACTB-208ENST00000464611 L1TD1Q5T7N2 865 aaKnown RBP10.59□□□□□ -0.71
ACTB-208ENST00000464611 ANKRD45Q5TZF3 282 aa10.59□□□□□ -0.71
ACTB-208ENST00000464611 SULT6B1Q6IMI4 303 aa10.59□□□□□ -0.71
ACTB-208ENST00000464611 DDX17Q92841 729 aaKnown RBP10.59□□□□□ -0.71
ACTB-208ENST00000464611 ISY1Q9ULR0 285 aaKnown RBP10.59□□□□□ -0.71
ACTB-208ENST00000464611 DLG5Q8TDM6 1919 aa10.58□□□□□ -0.72
ACTB-208ENST00000464611 KDRP35968 1356 aa10.58□□□□□ -0.72
ACTB-208ENST00000464611 CCT4P50991 539 aaKnown RBP10.58□□□□□ -0.72
ACTB-208ENST00000464611 RRS1Q15050 365 aaKnown RBP10.58□□□□□ -0.72
ACTB-208ENST00000464611 CASC1Q6TDU7 716 aa10.58□□□□□ -0.72
ACTB-208ENST00000464611 ANKRD44Q8N8A2 993 aa10.58□□□□□ -0.72
ACTB-208ENST00000464611 C8orf58Q8NAV2 365 aa10.58□□□□□ -0.72
ACTB-208ENST00000464611 CDC45O75419 566 aa10.57□□□□□ -0.72
ACTB-208ENST00000464611 LMOD2Q6P5Q4 547 aa10.57□□□□□ -0.72
ACTB-208ENST00000464611 TSPYL6Q8N831 410 aa10.57□□□□□ -0.72
ACTB-208ENST00000464611 ABTB2Q8N961 1025 aa10.57□□□□□ -0.72
ACTB-208ENST00000464611 RGPD1P0DJD0 1748 aa10.57□□□□□ -0.72
ACTB-208ENST00000464611 DDX11L8A8MPP1 907 aa10.56□□□□□ -0.72
ACTB-208ENST00000464611 FRAT2O75474 233 aaPredicted RBP10.56□□□□□ -0.72
ACTB-208ENST00000464611 HSPA1LP34931 641 aa10.56□□□□□ -0.72
ACTB-208ENST00000464611 MFAP1P55081 439 aaKnown RBP10.56□□□□□ -0.72
ACTB-208ENST00000464611 LNPKQ9C0E8 428 aa10.56□□□□□ -0.72
ACTB-208ENST00000464611 PCDH10Q9P2E7 1040 aa10.56□□□□□ -0.72
ACTB-208ENST00000464611 FARP1Q9Y4F1 1045 aaPredicted RBP10.56□□□□□ -0.72
ACTB-208ENST00000464611 ABCC6O95255 1503 aa10.56□□□□□ -0.72
ACTB-208ENST00000464611 SPATA31A6Q5VVP1 1343 aa10.56□□□□□ -0.72
ACTB-208ENST00000464611 AMPHP49418 695 aa10.55□□□□□ -0.72
ACTB-208ENST00000464611 SKOR2Q2VWA4 1001 aaPredicted RBP10.55□□□□□ -0.72
ACTB-208ENST00000464611 STK31Q9BXU1 1019 aa10.55□□□□□ -0.72
ACTB-208ENST00000464611 ZRANB1Q9UGI0 708 aa10.55□□□□□ -0.72
ACTB-208ENST00000464611 CRB1P82279 1406 aa10.55□□□□□ -0.72
ACTB-208ENST00000464611 IGSF1Q8N6C5 1336 aa10.55□□□□□ -0.72
ACTB-208ENST00000464611 NFAT5O94916 1531 aa10.54□□□□□ -0.72
ACTB-208ENST00000464611 CACNA1FO60840 1977 aa10.54□□□□□ -0.72
ACTB-208ENST00000464611 EPB41L2O43491 1005 aaKnown RBP10.54□□□□□ -0.72
ACTB-208ENST00000464611 GNAI3P08754 354 aa10.54□□□□□ -0.72
ACTB-208ENST00000464611 FBLN1P23142 703 aa10.54□□□□□ -0.72
ACTB-208ENST00000464611 NLRP6P59044 892 aa10.54□□□□□ -0.72
ACTB-208ENST00000464611 CCDC30Q5VVM6 783 aa10.54□□□□□ -0.72
ACTB-208ENST00000464611 KCNH5Q8NCM2 988 aa10.54□□□□□ -0.72
ACTB-208ENST00000464611 THUMPD2Q9BTF0 503 aaKnown RBP10.54□□□□□ -0.72
ACTB-208ENST00000464611 LTN1O94822 1766 aa10.54□□□□□ -0.72
ACTB-208ENST00000464611 POTEB2H3BUK9 544 aa10.53□□□□□ -0.72
ACTB-208ENST00000464611 MKRN4PQ13434 485 aaPredicted RBP10.53□□□□□ -0.72
ACTB-208ENST00000464611 HSP90AB2PQ58FF8 381 aa10.53□□□□□ -0.72
ACTB-208ENST00000464611 OSBPL3Q9H4L5 887 aa10.53□□□□□ -0.72
ACTB-208ENST00000464611 HDAC5Q9UQL6 1122 aa10.53□□□□□ -0.72
ACTB-208ENST00000464611 MAP3K19Q56UN5 1328 aa10.53□□□□□ -0.72
ACTB-208ENST00000464611 COL14A1Q05707 1796 aaKnown RBP10.52□□□□□ -0.72
ACTB-208ENST00000464611 GNAT3A8MTJ3 354 aa10.52□□□□□ -0.73
ACTB-208ENST00000464611 ELL2O00472 640 aaPredicted RBP10.52□□□□□ -0.73
ACTB-208ENST00000464611 HOXB7P09629 217 aa10.52□□□□□ -0.73
ACTB-208ENST00000464611 MCM4P33991 863 aa10.52□□□□□ -0.73
ACTB-208ENST00000464611 RABEP1Q15276 862 aa10.52□□□□□ -0.73
ACTB-208ENST00000464611 SIRT2Q8IXJ6 389 aa10.52□□□□□ -0.73
ACTB-208ENST00000464611 GBP4Q96PP9 640 aa10.52□□□□□ -0.73
ACTB-208ENST00000464611 TSPYL4Q9UJ04 414 aa10.52□□□□□ -0.73
ACTB-208ENST00000464611 PLCH1Q4KWH8 1693 aa10.51□□□□□ -0.73
ACTB-208ENST00000464611 FAM83GA6ND36 823 aa10.51□□□□□ -0.73
ACTB-208ENST00000464611 REC8O95072 547 aa10.51□□□□□ -0.73
ACTB-208ENST00000464611 TTC22Q5TAA0 569 aa10.51□□□□□ -0.73
ACTB-208ENST00000464611 CEP85Q6P2H3 762 aa10.51□□□□□ -0.73
ACTB-208ENST00000464611 PLEKHM2Q8IWE5 1019 aa10.51□□□□□ -0.73
ACTB-208ENST00000464611 ZNF579Q8NAF0 562 aaKnown RBP10.51□□□□□ -0.73
ACTB-208ENST00000464611 SRCIN1Q9C0H9 1055 aa10.51□□□□□ -0.73
ACTB-208ENST00000464611 SLKQ9H2G2 1235 aaPredicted RBP10.51□□□□□ -0.73
ACTB-208ENST00000464611 CPDO75976 1380 aa10.51□□□□□ -0.73
ACTB-208ENST00000464611 NWD2Q9ULI1 1742 aa10.5□□□□□ -0.73
ACTB-208ENST00000464611 GNAI2P04899 355 aa10.5□□□□□ -0.73
ACTB-208ENST00000464611 HSP90AB1P08238 724 aaKnown RBP10.5□□□□□ -0.73
ACTB-208ENST00000464611 TAF7Q15545 349 aaPredicted RBP10.5□□□□□ -0.73
ACTB-208ENST00000464611 MTHFSDQ2M296 383 aaKnown RBP10.5□□□□□ -0.73
ACTB-208ENST00000464611 NUTM2GQ5VZR2 741 aa10.5□□□□□ -0.73
ACTB-208ENST00000464611 TBC1D9Q6ZT07 1266 aa10.5□□□□□ -0.73
ACTB-208ENST00000464611 AEBP1Q8IUX7 1158 aa10.5□□□□□ -0.73
ACTB-208ENST00000464611 CWC22Q9HCG8 908 aaKnown RBP10.5□□□□□ -0.73
ACTB-208ENST00000464611 LRP6O75581 1613 aa10.5□□□□□ -0.73
ACTB-208ENST00000464611 FAM208AQ9UK61 1670 aaKnown RBP10.5□□□□□ -0.73
ACTB-208ENST00000464611 GOLGA6L22H0YM25 854 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms