RNA–Protein interactions for RNA: ENST00000464605.1

UBA3-206, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

TSL 2

Gene UBA3, Length 431 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-206ENST00000464605 CABP4P57796 275 aa29.75■■■□□ 2.35
UBA3-206ENST00000464605 UBR3Q6ZT12 1888 aa29.75■■■□□ 2.35
UBA3-206ENST00000464605 LGR6Q9HBX8 967 aa29.75■■■□□ 2.35
UBA3-206ENST00000464605 TFCP2L1Q9NZI6 479 aa29.75■■■□□ 2.35
UBA3-206ENST00000464605 NFATC2IPQ8NCF5 419 aa29.74■■■□□ 2.35
UBA3-206ENST00000464605 RSPH6AQ9H0K4 717 aa29.74■■■□□ 2.35
UBA3-206ENST00000464605 FHDC1Q9C0D6 1143 aaPredicted RBP29.73■■■□□ 2.35
UBA3-206ENST00000464605 SLC4A9Q96Q91 983 aa29.72■■■□□ 2.35
UBA3-206ENST00000464605 SYT17Q9BSW7 474 aa29.72■■■□□ 2.35
UBA3-206ENST00000464605 NUDCQ9Y266 331 aa29.72■■■□□ 2.35
UBA3-206ENST00000464605 DCAF8L1A6NGE4 600 aa29.71■■■□□ 2.35
UBA3-206ENST00000464605 RNMTO43148 476 aaKnown RBP29.71■■■□□ 2.35
UBA3-206ENST00000464605 ITPK1Q13572 414 aa29.71■■■□□ 2.35
UBA3-206ENST00000464605 SLC16A10Q8TF71 515 aa29.71■■■□□ 2.35
UBA3-206ENST00000464605 PHACTR3Q96KR7 559 aa29.71■■■□□ 2.35
UBA3-206ENST00000464605 MRC1P22897 1456 aa29.71■■■□□ 2.35
UBA3-206ENST00000464605 LINC00116Q8NCU8 138 aa29.7■■■□□ 2.35
UBA3-206ENST00000464605 COL5A3P25940 1745 aaPredicted RBP29.69■■■□□ 2.34
UBA3-206ENST00000464605 ARXQ96QS3 562 aa29.69■■■□□ 2.34
UBA3-206ENST00000464605 U2AF1L5P0DN76 240 aaPredicted RBP29.68■■■□□ 2.34
UBA3-206ENST00000464605 HMGB2P26583 209 aaKnown RBP29.68■■■□□ 2.34
UBA3-206ENST00000464605 PRKAR2BP31323 418 aa29.68■■■□□ 2.34
UBA3-206ENST00000464605 ATP6V1AP38606 617 aa29.68■■■□□ 2.34
UBA3-206ENST00000464605 U2AF1Q01081 240 aaKnown RBP eCLIP29.68■■■□□ 2.34
UBA3-206ENST00000464605 AMIGO3Q86WK7 504 aa29.68■■■□□ 2.34
UBA3-206ENST00000464605 COL23A1Q86Y22 540 aaPredicted RBP29.68■■■□□ 2.34
UBA3-206ENST00000464605 SLC52A2Q9HAB3 445 aa29.68■■■□□ 2.34
UBA3-206ENST00000464605 MYH14Q7Z406 1995 aaKnown RBP29.68■■■□□ 2.34
UBA3-206ENST00000464605 YY1P25490 414 aa29.67■■■□□ 2.34
UBA3-206ENST00000464605 RALBP1Q15311 655 aa29.67■■■□□ 2.34
UBA3-206ENST00000464605 SIPA1L3O60292 1781 aaPredicted RBP29.66■■■□□ 2.34
UBA3-206ENST00000464605 MAP3K5Q99683 1374 aa29.65■■■□□ 2.34
UBA3-206ENST00000464605 FCHSD2O94868 740 aa29.65■■■□□ 2.34
UBA3-206ENST00000464605 GAS2L2Q8NHY3 880 aa29.65■■■□□ 2.34
UBA3-206ENST00000464605 IL17REQ8NFR9 667 aa29.63■■■□□ 2.33
UBA3-206ENST00000464605 RBM42Q9BTD8 480 aaKnown RBP29.63■■■□□ 2.33
UBA3-206ENST00000464605 CICQ96RK0 1608 aaPredicted RBP29.63■■■□□ 2.33
UBA3-206ENST00000464605 TJP1Q07157 1748 aa29.62■■■□□ 2.33
UBA3-206ENST00000464605 SMIM5Q71RC9 77 aa29.62■■■□□ 2.33
UBA3-206ENST00000464605 GNAT3A8MTJ3 354 aa29.61■■■□□ 2.33
UBA3-206ENST00000464605 AK7Q96M32 723 aa29.61■■■□□ 2.33
UBA3-206ENST00000464605 UBR2Q8IWV8 1755 aa29.59■■■□□ 2.33
UBA3-206ENST00000464605 DLG5Q8TDM6 1919 aa29.59■■■□□ 2.33
UBA3-206ENST00000464605 PTCD1O75127 700 aaKnown RBP29.59■■■□□ 2.33
UBA3-206ENST00000464605 POLD1P28340 1107 aa29.58■■■□□ 2.33
UBA3-206ENST00000464605 FLAD1Q8NFF5 587 aa29.58■■■□□ 2.33
UBA3-206ENST00000464605 SLC39A6Q13433 755 aa29.57■■■□□ 2.32
UBA3-206ENST00000464605 KCPQ6ZWJ8 1503 aa29.56■■■□□ 2.32
UBA3-206ENST00000464605 CEMIPQ8WUJ3 1361 aa29.56■■■□□ 2.32
UBA3-206ENST00000464605 MYBBP1AQ9BQG0 1328 aaKnown RBP29.55■■■□□ 2.32
UBA3-206ENST00000464605 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP29.55■■■□□ 2.32
UBA3-206ENST00000464605 MSH5O43196 834 aa29.55■■■□□ 2.32
UBA3-206ENST00000464605 SSFA2P28290 1259 aa29.55■■■□□ 2.32
UBA3-206ENST00000464605 RC3H1Q5TC82 1133 aaKnown RBP29.54■■■□□ 2.32
UBA3-206ENST00000464605 PLEKHF1Q96S99 279 aa29.54■■■□□ 2.32
UBA3-206ENST00000464605 CNTNAP4Q9C0A0 1308 aa29.53■■■□□ 2.32
UBA3-206ENST00000464605 GNPATO15228 680 aa29.53■■■□□ 2.32
UBA3-206ENST00000464605 PHF14O94880 888 aa29.53■■■□□ 2.32
UBA3-206ENST00000464605 PRKRIP1Q9H875 184 aaPredicted RBP29.51■■■□□ 2.31
UBA3-206ENST00000464605 MSL1Q68DK7 614 aa29.49■■■□□ 2.31
UBA3-206ENST00000464605 TEFQ10587 303 aa29.48■■■□□ 2.31
UBA3-206ENST00000464605 C4AP0C0L4 1744 aa29.48■■■□□ 2.31
UBA3-206ENST00000464605 RPS6KA4O75676 772 aa29.47■■■□□ 2.31
UBA3-206ENST00000464605 CRKLP46109 303 aaKnown RBP29.47■■■□□ 2.31
UBA3-206ENST00000464605 DNAJC10Q8IXB1 793 aa29.47■■■□□ 2.31
UBA3-206ENST00000464605 RTCBQ9Y3I0 505 aaKnown RBP29.47■■■□□ 2.31
UBA3-206ENST00000464605 UTRNP46939 3433 aa29.46■■■□□ 2.31
UBA3-206ENST00000464605 MCM10Q7L590 875 aa29.46■■■□□ 2.31
UBA3-206ENST00000464605 KLHL34Q8N239 644 aa29.46■■■□□ 2.31
UBA3-206ENST00000464605 ZNF316A6NFI3 1004 aaPredicted RBP29.45■■■□□ 2.31
UBA3-206ENST00000464605 HTATSF1O43719 755 aaKnown RBP29.45■■■□□ 2.31
UBA3-206ENST00000464605 INTS5Q6P9B9 1019 aaKnown RBP29.45■■■□□ 2.31
UBA3-206ENST00000464605 DCTN1Q14203 1278 aa29.44■■■□□ 2.3
UBA3-206ENST00000464605 TRAPPC3LQ5T215 181 aa29.44■■■□□ 2.3
UBA3-206ENST00000464605 ZNF790Q6PG37 636 aa29.44■■■□□ 2.3
UBA3-206ENST00000464605 VSIG10Q8N0Z9 540 aa29.44■■■□□ 2.3
UBA3-206ENST00000464605 ARHGEF1Q92888 912 aaKnown RBP29.44■■■□□ 2.3
UBA3-206ENST00000464605 CYP19A1P11511 503 aaPredicted RBP29.43■■■□□ 2.3
UBA3-206ENST00000464605 NLGN2Q8NFZ4 835 aa29.43■■■□□ 2.3
UBA3-206ENST00000464605 GOLGB1Q14789 3259 aaKnown RBP29.43■■■□□ 2.3
UBA3-206ENST00000464605 ADRA2BP18089 450 aa29.42■■■□□ 2.3
UBA3-206ENST00000464605 RTF1Q92541 710 aaKnown RBP29.42■■■□□ 2.3
UBA3-206ENST00000464605 ZNF496Q96IT1 587 aaPredicted RBP29.42■■■□□ 2.3
UBA3-206ENST00000464605 KCNQ3O43525 872 aa29.41■■■□□ 2.3
UBA3-206ENST00000464605 NFE2L2Q16236 605 aa29.4■■■□□ 2.3
UBA3-206ENST00000464605 GPR162Q16538 588 aa29.4■■■□□ 2.3
UBA3-206ENST00000464605 TTC5Q8N0Z6 440 aa29.4■■■□□ 2.3
UBA3-206ENST00000464605 BTBD11A6QL63 1104 aa29.39■■■□□ 2.3
UBA3-206ENST00000464605 PNNQ9H307 717 aaKnown RBP29.39■■■□□ 2.3
UBA3-206ENST00000464605 HEG1Q9ULI3 1381 aa29.39■■■□□ 2.29
UBA3-206ENST00000464605 CCDC87Q9NVE4 849 aa29.38■■■□□ 2.29
UBA3-206ENST00000464605 NEFMP07197 916 aa29.37■■■□□ 2.29
UBA3-206ENST00000464605 ZNF784Q8NCA9 323 aaPredicted RBP29.35■■■□□ 2.29
UBA3-206ENST00000464605 GYS1P13807 737 aa29.34■■■□□ 2.29
UBA3-206ENST00000464605 RFC4P35249 363 aa29.34■■■□□ 2.29
UBA3-206ENST00000464605 FMNL2Q96PY5 1086 aa29.34■■■□□ 2.29
UBA3-206ENST00000464605 ZBTB1Q9Y2K1 713 aa29.34■■■□□ 2.29
UBA3-206ENST00000464605 SOS1Q07889 1333 aaPredicted RBP29.34■■■□□ 2.29
UBA3-206ENST00000464605 MAPK8IP3Q9UPT6 1336 aa29.34■■■□□ 2.29
UBA3-206ENST00000464605 KDM3BQ7LBC6 1761 aa29.34■■■□□ 2.29
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms