RNA–Protein interactions for RNA: ENST00000464493.5

SQSTM1-205, Transcript of sequestosome 1, humanhuman

TSL 4

Gene SQSTM1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-205ENST00000464493 HTATSF1O43719 755 aaKnown RBP19.2■□□□□ 0.66
SQSTM1-205ENST00000464493 KCNQ4P56696 695 aa19.2■□□□□ 0.66
SQSTM1-205ENST00000464493 NFE2L2Q16236 605 aa19.2■□□□□ 0.66
SQSTM1-205ENST00000464493 CCDC146Q8IYE0 955 aa19.2■□□□□ 0.66
SQSTM1-205ENST00000464493 TEFQ10587 303 aa19.19■□□□□ 0.66
SQSTM1-205ENST00000464493 R3HDM1Q15032 1099 aaKnown RBP19.19■□□□□ 0.66
SQSTM1-205ENST00000464493 RUNDC1Q96C34 613 aa19.19■□□□□ 0.66
SQSTM1-205ENST00000464493 MRC1P22897 1456 aa19.18■□□□□ 0.66
SQSTM1-205ENST00000464493 LOC102724428A0A0B4J2F2 783 aa19.18■□□□□ 0.66
SQSTM1-205ENST00000464493 PSDA5PKW4 1024 aaPredicted RBP19.18■□□□□ 0.66
SQSTM1-205ENST00000464493 SIK1P57059 783 aa19.18■□□□□ 0.66
SQSTM1-205ENST00000464493 CEMIPQ8WUJ3 1361 aa19.18■□□□□ 0.66
SQSTM1-205ENST00000464493 HMGB2P26583 209 aaKnown RBP19.17■□□□□ 0.66
SQSTM1-205ENST00000464493 MCM10Q7L590 875 aa19.17■□□□□ 0.66
SQSTM1-205ENST00000464493 PNISRQ8TF01 805 aaKnown RBP19.17■□□□□ 0.66
SQSTM1-205ENST00000464493 ANO8Q9HCE9 1232 aaPredicted RBP19.17■□□□□ 0.66
SQSTM1-205ENST00000464493 STK32BQ9NY57 414 aa19.17■□□□□ 0.66
SQSTM1-205ENST00000464493 DLG5Q8TDM6 1919 aa19.16■□□□□ 0.66
SQSTM1-205ENST00000464493 DCTN1Q14203 1278 aa19.16■□□□□ 0.66
SQSTM1-205ENST00000464493 RBM42Q9BTD8 480 aaKnown RBP19.16■□□□□ 0.66
SQSTM1-205ENST00000464493 ATP6V1AP38606 617 aa19.15■□□□□ 0.66
SQSTM1-205ENST00000464493 TMPOP42166 694 aaKnown RBP19.15■□□□□ 0.66
SQSTM1-205ENST00000464493 RIPK4P57078 832 aa19.15■□□□□ 0.66
SQSTM1-205ENST00000464493 SLC15A2Q16348 729 aa19.15■□□□□ 0.66
SQSTM1-205ENST00000464493 PTCD1O75127 700 aaKnown RBP19.14■□□□□ 0.65
SQSTM1-205ENST00000464493 SLC39A6Q13433 755 aa19.14■□□□□ 0.65
SQSTM1-205ENST00000464493 PAPPAQ13219 1627 aa19.14■□□□□ 0.65
SQSTM1-205ENST00000464493 DIEXFQ68CQ4 756 aaKnown RBP19.13■□□□□ 0.65
SQSTM1-205ENST00000464493 AKT1S1Q96B36 256 aa19.13■□□□□ 0.65
SQSTM1-205ENST00000464493 NEUROD2Q15784 382 aa19.12■□□□□ 0.65
SQSTM1-205ENST00000464493 ZNF827Q17R98 1081 aa19.12■□□□□ 0.65
SQSTM1-205ENST00000464493 SLC4A9Q96Q91 983 aa19.12■□□□□ 0.65
SQSTM1-205ENST00000464493 RRP7AQ9Y3A4 280 aaKnown RBP19.12■□□□□ 0.65
SQSTM1-205ENST00000464493 SIPA1L3O60292 1781 aaPredicted RBP19.11■□□□□ 0.65
SQSTM1-205ENST00000464493 C5P01031 1676 aa19.11■□□□□ 0.65
SQSTM1-205ENST00000464493 BTBD11A6QL63 1104 aa19.11■□□□□ 0.65
SQSTM1-205ENST00000464493 LMOD3Q0VAK6 560 aa19.11■□□□□ 0.65
SQSTM1-205ENST00000464493 ITPK1Q13572 414 aa19.11■□□□□ 0.65
SQSTM1-205ENST00000464493 TTC5Q8N0Z6 440 aa19.11■□□□□ 0.65
SQSTM1-205ENST00000464493 TAF1LQ8IZX4 1826 aa19.11■□□□□ 0.65
SQSTM1-205ENST00000464493 TAF7Q15545 349 aaPredicted RBP19.1■□□□□ 0.65
SQSTM1-205ENST00000464493 ZNF790Q6PG37 636 aa19.1■□□□□ 0.65
SQSTM1-205ENST00000464493 TFCP2L1Q9NZI6 479 aa19.1■□□□□ 0.65
SQSTM1-205ENST00000464493 ZNF831Q5JPB2 1677 aa19.09■□□□□ 0.65
SQSTM1-205ENST00000464493 APAF1O14727 1248 aa19.09■□□□□ 0.65
SQSTM1-205ENST00000464493 LINC00116Q8NCU8 138 aa19.09■□□□□ 0.65
SQSTM1-205ENST00000464493 THUMPD2Q9BTF0 503 aaKnown RBP19.09■□□□□ 0.65
SQSTM1-205ENST00000464493 FAM9BQ8IZU0 186 aa19.07■□□□□ 0.64
SQSTM1-205ENST00000464493 AK7Q96M32 723 aa19.07■□□□□ 0.64
SQSTM1-205ENST00000464493 TRIM35Q9UPQ4 493 aa19.07■□□□□ 0.64
SQSTM1-205ENST00000464493 KCPQ6ZWJ8 1503 aa19.06■□□□□ 0.64
SQSTM1-205ENST00000464493 C4BP0C0L5 1744 aa19.06■□□□□ 0.64
SQSTM1-205ENST00000464493 KCNQ3O43525 872 aa19.06■□□□□ 0.64
SQSTM1-205ENST00000464493 VSIG10Q8N0Z9 540 aa19.06■□□□□ 0.64
SQSTM1-205ENST00000464493 ZNF496Q96IT1 587 aaPredicted RBP19.06■□□□□ 0.64
SQSTM1-205ENST00000464493 PDGFDQ9GZP0 370 aaPredicted RBP19.06■□□□□ 0.64
SQSTM1-205ENST00000464493 CCER2I3L3R5 266 aa19.05■□□□□ 0.64
SQSTM1-205ENST00000464493 FMNL2Q96PY5 1086 aa19.05■□□□□ 0.64
SQSTM1-205ENST00000464493 MIS18AQ9NYP9 233 aa19.05■□□□□ 0.64
SQSTM1-205ENST00000464493 UBR2Q8IWV8 1755 aa19.05■□□□□ 0.64
SQSTM1-205ENST00000464493 RC3H1Q5TC82 1133 aaKnown RBP19.04■□□□□ 0.64
SQSTM1-205ENST00000464493 DNAJC10Q8IXB1 793 aa19.04■□□□□ 0.64
SQSTM1-205ENST00000464493 PNPLA7Q6ZV29 1317 aa19.03■□□□□ 0.64
SQSTM1-205ENST00000464493 HEG1Q9ULI3 1381 aa19.03■□□□□ 0.64
SQSTM1-205ENST00000464493 COL5A3P25940 1745 aaPredicted RBP19.03■□□□□ 0.64
SQSTM1-205ENST00000464493 QSER1Q2KHR3 1735 aa19.03■□□□□ 0.64
SQSTM1-205ENST00000464493 TUBGCP6Q96RT7 1819 aa19.02■□□□□ 0.64
SQSTM1-205ENST00000464493 SRCAPQ6ZRS2 3230 aa19.02■□□□□ 0.64
SQSTM1-205ENST00000464493 GNPATO15228 680 aa19.02■□□□□ 0.64
SQSTM1-205ENST00000464493 FLAD1Q8NFF5 587 aa19.02■□□□□ 0.64
SQSTM1-205ENST00000464493 TJP1Q07157 1748 aa19.02■□□□□ 0.63
SQSTM1-205ENST00000464493 CNTNAP4Q9C0A0 1308 aa19.01■□□□□ 0.63
SQSTM1-205ENST00000464493 CASZ1Q86V15 1759 aa19.01■□□□□ 0.63
SQSTM1-205ENST00000464493 CICQ96RK0 1608 aaPredicted RBP19.01■□□□□ 0.63
SQSTM1-205ENST00000464493 CRKLP46109 303 aaKnown RBP19.01■□□□□ 0.63
SQSTM1-205ENST00000464493 COL23A1Q86Y22 540 aaPredicted RBP19.01■□□□□ 0.63
SQSTM1-205ENST00000464493 TEX13AQ9BXU3 409 aaPredicted RBP19.01■□□□□ 0.63
SQSTM1-205ENST00000464493 MSH5O43196 834 aa19■□□□□ 0.63
SQSTM1-205ENST00000464493 STARD3NLO95772 234 aa19■□□□□ 0.63
SQSTM1-205ENST00000464493 CYP19A1P11511 503 aaPredicted RBP19■□□□□ 0.63
SQSTM1-205ENST00000464493 AMIGO3Q86WK7 504 aa19■□□□□ 0.63
SQSTM1-205ENST00000464493 MIER1Q8N108 512 aa19■□□□□ 0.63
SQSTM1-205ENST00000464493 BABAM1Q9NWV8 329 aa19■□□□□ 0.63
SQSTM1-205ENST00000464493 TSPYL4Q9UJ04 414 aa19■□□□□ 0.63
SQSTM1-205ENST00000464493 RTCBQ9Y3I0 505 aaKnown RBP19■□□□□ 0.63
SQSTM1-205ENST00000464493 UBR3Q6ZT12 1888 aa19■□□□□ 0.63
SQSTM1-205ENST00000464493 MYH14Q7Z406 1995 aaKnown RBP18.99■□□□□ 0.63
SQSTM1-205ENST00000464493 SENP3-EIF4A1A0A087X0R7 540 aa18.99■□□□□ 0.63
SQSTM1-205ENST00000464493 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.99■□□□□ 0.63
SQSTM1-205ENST00000464493 PHF14O94880 888 aa18.99■□□□□ 0.63
SQSTM1-205ENST00000464493 ZBTB7AO95365 584 aa18.99■□□□□ 0.63
SQSTM1-205ENST00000464493 SSFA2P28290 1259 aa18.99■□□□□ 0.63
SQSTM1-205ENST00000464493 SMIM5Q71RC9 77 aa18.99■□□□□ 0.63
SQSTM1-205ENST00000464493 SLC16A10Q8TF71 515 aa18.99■□□□□ 0.63
SQSTM1-205ENST00000464493 RPS6KA4O75676 772 aa18.98■□□□□ 0.63
SQSTM1-205ENST00000464493 SNRPA1P09661 255 aaKnown RBP18.98■□□□□ 0.63
SQSTM1-205ENST00000464493 INTS5Q6P9B9 1019 aaKnown RBP18.98■□□□□ 0.63
SQSTM1-205ENST00000464493 MTFR1LQ9H019 292 aa18.98■□□□□ 0.63
SQSTM1-205ENST00000464493 SPON1Q9HCB6 807 aa18.98■□□□□ 0.63
SQSTM1-205ENST00000464493 CCDC87Q9NVE4 849 aa18.98■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms