RNA–Protein interactions for RNA: ENST00000464480.1

HMGXB4-205, Transcript of HMG-box containing 4, humanhuman

TSL 2

Gene HMGXB4, Length 559 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-205ENST00000464480 GNEQ9Y223 722 aaKnown RBP6.55□□□□□ -1.36
HMGXB4-205ENST00000464480 STAU1O95793 577 aaKnown RBP6.54□□□□□ -1.36
HMGXB4-205ENST00000464480 TIMP2P16035 220 aa6.54□□□□□ -1.36
HMGXB4-205ENST00000464480 SMPD1P17405 629 aa6.54□□□□□ -1.36
HMGXB4-205ENST00000464480 ARID4AP29374 1257 aaPredicted RBP6.54□□□□□ -1.36
HMGXB4-205ENST00000464480 CBLBQ13191 982 aa6.54□□□□□ -1.36
HMGXB4-205ENST00000464480 OCLNQ16625 522 aa6.54□□□□□ -1.36
HMGXB4-205ENST00000464480 CTC1Q2NKJ3 1217 aa6.54□□□□□ -1.36
HMGXB4-205ENST00000464480 Q6ZVU0 165 aa6.54□□□□□ -1.36
HMGXB4-205ENST00000464480 PRIMPOLQ96LW4 560 aa6.54□□□□□ -1.36
HMGXB4-205ENST00000464480 GZF1Q9H116 711 aaPredicted RBP6.54□□□□□ -1.36
HMGXB4-205ENST00000464480 SERTAD1Q9UHV2 236 aa6.54□□□□□ -1.36
HMGXB4-205ENST00000464480 CCDC9Q9Y3X0 531 aaKnown RBP6.54□□□□□ -1.36
HMGXB4-205ENST00000464480 TMCO4Q5TGY1 634 aa6.53□□□□□ -1.36
HMGXB4-205ENST00000464480 PHLDB3Q6NSJ2 640 aa6.53□□□□□ -1.36
HMGXB4-205ENST00000464480 TXNDC2Q86VQ3 553 aa6.53□□□□□ -1.36
HMGXB4-205ENST00000464480 SLC4A9Q96Q91 983 aa6.53□□□□□ -1.36
HMGXB4-205ENST00000464480 KLF16Q9BXK1 252 aaPredicted RBP6.53□□□□□ -1.36
HMGXB4-205ENST00000464480 ZFAND3Q9H8U3 227 aa6.53□□□□□ -1.36
HMGXB4-205ENST00000464480 FOXO3O43524 673 aa6.52□□□□□ -1.37
HMGXB4-205ENST00000464480 LGR5O75473 907 aa6.52□□□□□ -1.37
HMGXB4-205ENST00000464480 IGFBP4P22692 258 aa6.52□□□□□ -1.37
HMGXB4-205ENST00000464480 WEE1P30291 646 aa6.52□□□□□ -1.37
HMGXB4-205ENST00000464480 CLN3Q13286 438 aa6.52□□□□□ -1.37
HMGXB4-205ENST00000464480 TLR1Q15399 786 aa6.52□□□□□ -1.37
HMGXB4-205ENST00000464480 NBPF15Q8N660 670 aa6.52□□□□□ -1.37
HMGXB4-205ENST00000464480 GAS2L2Q8NHY3 880 aa6.52□□□□□ -1.37
HMGXB4-205ENST00000464480 CNKSR1Q969H4 720 aa6.52□□□□□ -1.37
HMGXB4-205ENST00000464480 NLRP3Q96P20 1036 aa6.52□□□□□ -1.37
HMGXB4-205ENST00000464480 A0A1W2PRU2 124 aa6.51□□□□□ -1.37
HMGXB4-205ENST00000464480 A6NJY4 79 aa6.51□□□□□ -1.37
HMGXB4-205ENST00000464480 AXIN1O15169 862 aa6.51□□□□□ -1.37
HMGXB4-205ENST00000464480 PTCD1O75127 700 aaKnown RBP6.51□□□□□ -1.37
HMGXB4-205ENST00000464480 AVPP01185 164 aa6.51□□□□□ -1.37
HMGXB4-205ENST00000464480 IL2RAP01589 272 aa6.51□□□□□ -1.37
HMGXB4-205ENST00000464480 PTGIRP43119 386 aa6.51□□□□□ -1.37
HMGXB4-205ENST00000464480 SMTNP53814 917 aa6.51□□□□□ -1.37
HMGXB4-205ENST00000464480 EPHA4P54764 986 aa6.51□□□□□ -1.37
HMGXB4-205ENST00000464480 MTFR1Q15390 333 aa6.51□□□□□ -1.37
HMGXB4-205ENST00000464480 TNS4Q8IZW8 715 aa6.51□□□□□ -1.37
HMGXB4-205ENST00000464480 MEIOBQ8N635 442 aa6.51□□□□□ -1.37
HMGXB4-205ENST00000464480 SCG3Q8WXD2 468 aaKnown RBP6.51□□□□□ -1.37
HMGXB4-205ENST00000464480 HPS1Q92902 700 aa6.51□□□□□ -1.37
HMGXB4-205ENST00000464480 VTI1AQ96AJ9 217 aa6.51□□□□□ -1.37
HMGXB4-205ENST00000464480 XAGE2Q96GT9 111 aa6.51□□□□□ -1.37
HMGXB4-205ENST00000464480 ESYT1Q9BSJ8 1104 aa6.51□□□□□ -1.37
HMGXB4-205ENST00000464480 CHMP3Q9Y3E7 222 aa6.51□□□□□ -1.37
HMGXB4-205ENST00000464480 MEN1O00255 615 aa6.5□□□□□ -1.37
HMGXB4-205ENST00000464480 UPP2O95045 317 aa6.5□□□□□ -1.37
HMGXB4-205ENST00000464480 GTF2E1P29083 439 aaPredicted RBP6.5□□□□□ -1.37
HMGXB4-205ENST00000464480 RELBQ01201 579 aa6.5□□□□□ -1.37
HMGXB4-205ENST00000464480 TAS1R3Q7RTX0 852 aa6.5□□□□□ -1.37
HMGXB4-205ENST00000464480 SLC9A9Q8IVB4 645 aa6.5□□□□□ -1.37
HMGXB4-205ENST00000464480 CRIPAKQ8N1N5 446 aa6.5□□□□□ -1.37
HMGXB4-205ENST00000464480 AGBL1Q96MI9 1066 aa6.5□□□□□ -1.37
HMGXB4-205ENST00000464480 TSPAN10Q9H1Z9 355 aaPredicted RBP6.5□□□□□ -1.37
HMGXB4-205ENST00000464480 ATAD2Q6PL18 1390 aa6.49□□□□□ -1.37
HMGXB4-205ENST00000464480 CAPN5O15484 640 aaPredicted RBP6.49□□□□□ -1.37
HMGXB4-205ENST00000464480 PPP1R12BO60237 982 aaPredicted RBP6.49□□□□□ -1.37
HMGXB4-205ENST00000464480 SMCPP49901 116 aaPredicted RBP6.49□□□□□ -1.37
HMGXB4-205ENST00000464480 PSMA6P60900 246 aaKnown RBP6.49□□□□□ -1.37
HMGXB4-205ENST00000464480 FOXK2Q01167 660 aa6.49□□□□□ -1.37
HMGXB4-205ENST00000464480 FKBP5Q13451 457 aaPredicted RBP6.49□□□□□ -1.37
HMGXB4-205ENST00000464480 SND1Q7KZF4 910 aaKnown RBP eCLIP6.49□□□□□ -1.37
HMGXB4-205ENST00000464480 KDF1Q8NAX2 398 aaPredicted RBP6.49□□□□□ -1.37
HMGXB4-205ENST00000464480 COL26A1Q96A83 441 aa6.49□□□□□ -1.37
HMGXB4-205ENST00000464480 TSEN34Q9BSV6 310 aaKnown RBP6.49□□□□□ -1.37
HMGXB4-205ENST00000464480 MKNK1Q9BUB5 465 aa6.49□□□□□ -1.37
HMGXB4-205ENST00000464480 SCHIP1Q9P0W5 487 aaPredicted RBP6.49□□□□□ -1.37
HMGXB4-205ENST00000464480 SERPINB4P48594 390 aa6.48□□□□□ -1.37
HMGXB4-205ENST00000464480 LINC00528Q8N1L1 170 aa6.48□□□□□ -1.37
HMGXB4-205ENST00000464480 CHMP7Q8WUX9 453 aaPredicted RBP6.48□□□□□ -1.37
HMGXB4-205ENST00000464480 ZNF395Q9H8N7 513 aaPredicted RBP6.48□□□□□ -1.37
HMGXB4-205ENST00000464480 UTP3Q9NQZ2 479 aaKnown RBP eCLIP6.48□□□□□ -1.373e-16■■■■■ 205
HMGXB4-205ENST00000464480 HRH3Q9Y5N1 445 aa6.48□□□□□ -1.37
HMGXB4-205ENST00000464480 CDK2AP1O14519 115 aa6.47□□□□□ -1.37
HMGXB4-205ENST00000464480 C21orf2O43822 256 aa6.47□□□□□ -1.37
HMGXB4-205ENST00000464480 GPC1P35052 558 aa6.47□□□□□ -1.37
HMGXB4-205ENST00000464480 CENPCQ03188 943 aa6.47□□□□□ -1.37
HMGXB4-205ENST00000464480 ZNF787Q6DD87 383 aa6.47□□□□□ -1.37
HMGXB4-205ENST00000464480 STAG2Q8N3U4 1231 aa6.47□□□□□ -1.37
HMGXB4-205ENST00000464480 FHDC1Q9C0D6 1143 aaPredicted RBP6.47□□□□□ -1.37
HMGXB4-205ENST00000464480 AAASQ9NRG9 546 aa6.47□□□□□ -1.37
HMGXB4-205ENST00000464480 EGFL7Q9UHF1 273 aa6.47□□□□□ -1.37
HMGXB4-205ENST00000464480 ABL1P00519 1130 aa6.46□□□□□ -1.38
HMGXB4-205ENST00000464480 SCNN1AP37088 669 aa6.46□□□□□ -1.38
HMGXB4-205ENST00000464480 SLC27A3Q5K4L6 730 aa6.46□□□□□ -1.38
HMGXB4-205ENST00000464480 TBCELQ5QJ74 424 aa6.46□□□□□ -1.38
HMGXB4-205ENST00000464480 TMEM214Q6NUQ4 689 aaKnown RBP6.46□□□□□ -1.38
HMGXB4-205ENST00000464480 ZSCAN10Q96SZ4 725 aaPredicted RBP6.46□□□□□ -1.38
HMGXB4-205ENST00000464480 SOWAHDA6NJG2 315 aa6.45□□□□□ -1.38
HMGXB4-205ENST00000464480 LCE2BO14633 110 aa6.45□□□□□ -1.38
HMGXB4-205ENST00000464480 ST8SIA5O15466 376 aa6.45□□□□□ -1.38
HMGXB4-205ENST00000464480 SPINT1O43278 529 aa6.45□□□□□ -1.38
HMGXB4-205ENST00000464480 MFAP1P55081 439 aaKnown RBP6.45□□□□□ -1.38
HMGXB4-205ENST00000464480 CCDC27Q2M243 656 aa6.45□□□□□ -1.38
HMGXB4-205ENST00000464480 GNASQ5JWF2 1037 aa6.45□□□□□ -1.38
HMGXB4-205ENST00000464480 PURBQ96QR8 312 aaKnown RBP6.45□□□□□ -1.38
HMGXB4-205ENST00000464480 C2orf49Q9BVC5 232 aaPredicted RBP6.45□□□□□ -1.38
HMGXB4-205ENST00000464480 NIFKQ9BYG3 293 aaKnown RBP6.45□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms