RNA–Protein interactions for RNA: ENST00000463753.5

COL8A1-205, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL8A1, Length 2,964 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-205ENST00000463753 KCNG1Q9UIX4 513 aa4.62□□□□□ -1.67
COL8A1-205ENST00000463753 ERBINQ96RT1 1412 aa4.62□□□□□ -1.67
COL8A1-205ENST00000463753 ADGRL3Q9HAR2 1447 aa4.62□□□□□ -1.67
COL8A1-205ENST00000463753 MEX3CQ5U5Q3 659 aaKnown RBP4.62□□□□□ -1.67
COL8A1-205ENST00000463753 GCC1Q96CN9 775 aa4.62□□□□□ -1.67
COL8A1-205ENST00000463753 QRICH2Q9H0J4 1663 aa4.62□□□□□ -1.67
COL8A1-205ENST00000463753 FAM163AQ96GL9 167 aaPredicted RBP4.62□□□□□ -1.67
COL8A1-205ENST00000463753 QTRT2Q9H974 415 aaKnown RBP4.62□□□□□ -1.67
COL8A1-205ENST00000463753 CGNQ9P2M7 1197 aaKnown RBP4.62□□□□□ -1.67
COL8A1-205ENST00000463753 SOS2Q07890 1332 aaPredicted RBP4.61□□□□□ -1.67
COL8A1-205ENST00000463753 SBF2Q86WG5 1849 aa4.61□□□□□ -1.67
COL8A1-205ENST00000463753 FAM83GA6ND36 823 aa4.61□□□□□ -1.67
COL8A1-205ENST00000463753 RIPK4P57078 832 aa4.61□□□□□ -1.67
COL8A1-205ENST00000463753 TMC1Q8TDI8 760 aa4.61□□□□□ -1.67
COL8A1-205ENST00000463753 ZBTB9Q96C00 473 aa4.61□□□□□ -1.67
COL8A1-205ENST00000463753 TBX22Q9Y458 520 aa4.61□□□□□ -1.67
COL8A1-205ENST00000463753 PIK3C2AO00443 1686 aa4.61□□□□□ -1.67
COL8A1-205ENST00000463753 PXDNQ92626 1479 aa4.61□□□□□ -1.67
COL8A1-205ENST00000463753 PATL2C9JE40 543 aaKnown RBP4.61□□□□□ -1.67
COL8A1-205ENST00000463753 APPP05067 770 aa4.61□□□□□ -1.67
COL8A1-205ENST00000463753 EMP3P54852 163 aa4.61□□□□□ -1.67
COL8A1-205ENST00000463753 POTEEQ6S8J3 1075 aa4.61□□□□□ -1.67
COL8A1-205ENST00000463753 CHMP4CQ96CF2 233 aa4.61□□□□□ -1.67
COL8A1-205ENST00000463753 HS3ST6Q96QI5 342 aa4.61□□□□□ -1.67
COL8A1-205ENST00000463753 MAP7D2Q96T17 732 aa4.61□□□□□ -1.67
COL8A1-205ENST00000463753 MYH16Q9H6N6 1097 aa4.61□□□□□ -1.67
COL8A1-205ENST00000463753 R3HCC1Q9Y3T6 440 aaKnown RBP4.61□□□□□ -1.67
COL8A1-205ENST00000463753 RGS22Q8NE09 1264 aa4.6□□□□□ -1.67
COL8A1-205ENST00000463753 SLKQ9H2G2 1235 aaPredicted RBP4.6□□□□□ -1.67
COL8A1-205ENST00000463753 NPDC1Q9NQX5 325 aaPredicted RBP4.6□□□□□ -1.67
COL8A1-205ENST00000463753 CCDC141Q6ZP82 1450 aa4.6□□□□□ -1.67
COL8A1-205ENST00000463753 KIF13BQ9NQT8 1826 aa4.6□□□□□ -1.67
COL8A1-205ENST00000463753 HDGFP51858 240 aaKnown RBP4.6□□□□□ -1.67
COL8A1-205ENST00000463753 CCDC184Q52MB2 194 aa4.6□□□□□ -1.67
COL8A1-205ENST00000463753 UTP14CQ5TAP6 766 aaKnown RBP4.6□□□□□ -1.67
COL8A1-205ENST00000463753 POLR3GLQ9BT43 218 aa4.6□□□□□ -1.67
COL8A1-205ENST00000463753 ADAM33Q9BZ11 813 aa4.6□□□□□ -1.67
COL8A1-205ENST00000463753 LRPPRCP42704 1394 aaKnown RBP4.6□□□□□ -1.67
COL8A1-205ENST00000463753 KCNQ2O43526 872 aa4.59□□□□□ -1.67
COL8A1-205ENST00000463753 IGSF3O75054 1194 aa4.59□□□□□ -1.67
COL8A1-205ENST00000463753 ZNF454Q8N9F8 522 aa4.59□□□□□ -1.67
COL8A1-205ENST00000463753 ERBB3P21860 1342 aa4.59□□□□□ -1.67
COL8A1-205ENST00000463753 PPP1R3GB7ZBB8 358 aa4.59□□□□□ -1.67
COL8A1-205ENST00000463753 ZSCAN20P17040 1043 aaPredicted RBP4.59□□□□□ -1.67
COL8A1-205ENST00000463753 CBX1P83916 185 aa4.59□□□□□ -1.67
COL8A1-205ENST00000463753 FSTL1Q12841 308 aa4.59□□□□□ -1.67
COL8A1-205ENST00000463753 VPS72Q15906 364 aa4.59□□□□□ -1.67
COL8A1-205ENST00000463753 SPON1Q9HCB6 807 aa4.59□□□□□ -1.67
COL8A1-205ENST00000463753 PKD1L3Q7Z443 1732 aa4.59□□□□□ -1.68
COL8A1-205ENST00000463753 TOPAZ1Q8N9V7 1692 aa4.59□□□□□ -1.68
COL8A1-205ENST00000463753 TK2O00142 265 aa4.59□□□□□ -1.68
COL8A1-205ENST00000463753 ARHGAP33O14559 1287 aa4.59□□□□□ -1.68
COL8A1-205ENST00000463753 PTGDRQ13258 359 aa4.59□□□□□ -1.68
COL8A1-205ENST00000463753 VARS2Q5ST30 1063 aaKnown RBP4.59□□□□□ -1.68
COL8A1-205ENST00000463753 C6orf132Q5T0Z8 1188 aa4.59□□□□□ -1.68
COL8A1-205ENST00000463753 BCCIPQ9P287 314 aaKnown RBP eCLIP4.59□□□□□ -1.68
COL8A1-205ENST00000463753 KIF15Q9NS87 1388 aa4.58□□□□□ -1.68
COL8A1-205ENST00000463753 UQCRHLA0A096LP55 91 aa4.58□□□□□ -1.68
COL8A1-205ENST00000463753 ZBTB7CA1YPR0 619 aa4.58□□□□□ -1.68
COL8A1-205ENST00000463753 UQCRHP07919 91 aa4.58□□□□□ -1.68
COL8A1-205ENST00000463753 LMOD2Q6P5Q4 547 aa4.58□□□□□ -1.68
COL8A1-205ENST00000463753 EXOC6Q8TAG9 804 aa4.58□□□□□ -1.68
COL8A1-205ENST00000463753 DDX12PQ92771 950 aa4.58□□□□□ -1.68
COL8A1-205ENST00000463753 C19orf44Q9H6X5 657 aa4.58□□□□□ -1.68
COL8A1-205ENST00000463753 MRS2Q9HD23 443 aa4.58□□□□□ -1.68
COL8A1-205ENST00000463753 EID1Q9Y6B2 187 aa4.58□□□□□ -1.68
COL8A1-205ENST00000463753 RBBP6Q7Z6E9 1792 aaKnown RBP4.58□□□□□ -1.68
COL8A1-205ENST00000463753 FMN2Q9NZ56 1722 aa4.58□□□□□ -1.68
COL8A1-205ENST00000463753 NGEFQ8N5V2 710 aa4.58□□□□□ -1.68
COL8A1-205ENST00000463753 HDAC5Q9UQL6 1122 aa4.58□□□□□ -1.68
COL8A1-205ENST00000463753 CASKIN1Q8WXD9 1431 aa4.57□□□□□ -1.68
COL8A1-205ENST00000463753 PTPRUQ92729 1446 aa4.57□□□□□ -1.68
COL8A1-205ENST00000463753 TMED8Q6PL24 325 aaPredicted RBP4.57□□□□□ -1.68
COL8A1-205ENST00000463753 ZBED9Q6R2W3 1325 aa4.57□□□□□ -1.68
COL8A1-205ENST00000463753 ZMYND10O75800 440 aa4.57□□□□□ -1.68
COL8A1-205ENST00000463753 KIF20AO95235 890 aa4.57□□□□□ -1.68
COL8A1-205ENST00000463753 MS4A1P11836 297 aa4.57□□□□□ -1.68
COL8A1-205ENST00000463753 PTPREP23469 700 aa4.57□□□□□ -1.68
COL8A1-205ENST00000463753 DNAJC5GQ8N7S2 189 aa4.57□□□□□ -1.68
COL8A1-205ENST00000463753 SLC52A1Q9NWF4 448 aa4.57□□□□□ -1.68
COL8A1-205ENST00000463753 ATP7BP35670 1465 aa4.57□□□□□ -1.68
COL8A1-205ENST00000463753 GRXCR2A6NFK2 248 aa4.56□□□□□ -1.68
COL8A1-205ENST00000463753 FCHSD2O94868 740 aa4.56□□□□□ -1.68
COL8A1-205ENST00000463753 MSNP26038 577 aaKnown RBP4.56□□□□□ -1.68
COL8A1-205ENST00000463753 POTEGQ6S5H5 508 aa4.56□□□□□ -1.68
COL8A1-205ENST00000463753 ABCF1Q8NE71 845 aaKnown RBP eCLIP4.56□□□□□ -1.68
COL8A1-205ENST00000463753 NHSQ6T4R5 1651 aa4.56□□□□□ -1.68
COL8A1-205ENST00000463753 ALS2Q96Q42 1657 aa4.56□□□□□ -1.68
COL8A1-205ENST00000463753 POTEMA6NI47 508 aa4.56□□□□□ -1.68
COL8A1-205ENST00000463753 GRIN3BO60391 1043 aa4.56□□□□□ -1.68
COL8A1-205ENST00000463753 LETM1O95202 739 aaPredicted RBP4.56□□□□□ -1.68
COL8A1-205ENST00000463753 FAM193AP78312 1265 aa4.56□□□□□ -1.68
COL8A1-205ENST00000463753 NBPF8Q3BBV2 869 aa4.56□□□□□ -1.68
COL8A1-205ENST00000463753 RBM26Q5T8P6 1007 aaKnown RBP4.56□□□□□ -1.68
COL8A1-205ENST00000463753 NBPF14Q5TI25 921 aa4.56□□□□□ -1.68
COL8A1-205ENST00000463753 PDZRN4Q6ZMN7 1036 aaPredicted RBP4.56□□□□□ -1.68
COL8A1-205ENST00000463753 MARVELD3Q96A59 401 aa4.56□□□□□ -1.68
COL8A1-205ENST00000463753 GJD4Q96KN9 370 aaPredicted RBP4.56□□□□□ -1.68
COL8A1-205ENST00000463753 ZBED2Q9BTP6 218 aa4.56□□□□□ -1.68
COL8A1-205ENST00000463753 CCDC94Q9BW85 323 aaPredicted RBP4.56□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms