RNA–Protein interactions for RNA: ENST00000463717.5

GCOM1-204, Transcript of GRINL1A complex locus 1, humanhuman

TSL 2

Gene GCOM1, Length 1,694 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCOM1-204ENST00000463717 KDM4FA0A1W2PPD8 638 aa25.44■■□□□ 1.66
GCOM1-204ENST00000463717 TEFQ10587 303 aa25.44■■□□□ 1.66
GCOM1-204ENST00000463717 UPF2Q9HAU5 1272 aaKnown RBP25.44■■□□□ 1.66
GCOM1-204ENST00000463717 RPAP2Q8IXW5 612 aaPredicted RBP25.43■■□□□ 1.66
GCOM1-204ENST00000463717 PARP4Q9UKK3 1724 aaKnown RBP25.43■■□□□ 1.66
GCOM1-204ENST00000463717 ANKRD44Q8N8A2 993 aa25.42■■□□□ 1.66
GCOM1-204ENST00000463717 AXIN2Q9Y2T1 843 aa25.42■■□□□ 1.66
GCOM1-204ENST00000463717 NHSL1Q5SYE7 1610 aa25.42■■□□□ 1.66
GCOM1-204ENST00000463717 FLIIQ13045 1269 aa25.42■■□□□ 1.66
GCOM1-204ENST00000463717 SIRT2Q8IXJ6 389 aa25.41■■□□□ 1.66
GCOM1-204ENST00000463717 RNMTO43148 476 aaKnown RBP25.4■■□□□ 1.66
GCOM1-204ENST00000463717 ZC3H6P61129 1189 aaKnown RBP25.4■■□□□ 1.66
GCOM1-204ENST00000463717 EIF4A1P60842 406 aaKnown RBP25.39■■□□□ 1.65
GCOM1-204ENST00000463717 HDGFL1Q5TGJ6 251 aa25.39■■□□□ 1.65
GCOM1-204ENST00000463717 BRINP3Q76B58 766 aa25.39■■□□□ 1.65
GCOM1-204ENST00000463717 G2E3Q7L622 706 aa25.39■■□□□ 1.65
GCOM1-204ENST00000463717 LNPKQ9C0E8 428 aa25.38■■□□□ 1.65
GCOM1-204ENST00000463717 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP25.38■■□□□ 1.65
GCOM1-204ENST00000463717 CEP85Q6P2H3 762 aa25.37■■□□□ 1.65
GCOM1-204ENST00000463717 RAPGEF4Q8WZA2 1011 aa25.37■■□□□ 1.65
GCOM1-204ENST00000463717 LGR6Q9HBX8 967 aa25.37■■□□□ 1.65
GCOM1-204ENST00000463717 MRC1P22897 1456 aa25.37■■□□□ 1.65
GCOM1-204ENST00000463717 HMMRO75330 724 aa25.36■■□□□ 1.65
GCOM1-204ENST00000463717 PLEKHG5O94827 1062 aa25.36■■□□□ 1.65
GCOM1-204ENST00000463717 FKBP5Q13451 457 aaPredicted RBP25.36■■□□□ 1.65
GCOM1-204ENST00000463717 ANKRD45Q5TZF3 282 aa25.36■■□□□ 1.65
GCOM1-204ENST00000463717 DDX17Q92841 729 aaKnown RBP25.36■■□□□ 1.65
GCOM1-204ENST00000463717 DCTPP1Q9H773 170 aa25.36■■□□□ 1.65
GCOM1-204ENST00000463717 BTBD11A6QL63 1104 aa25.36■■□□□ 1.65
GCOM1-204ENST00000463717 TATP17735 454 aaPredicted RBP25.35■■□□□ 1.65
GCOM1-204ENST00000463717 BMP2KLQ5H9B9 411 aa25.35■■□□□ 1.65
GCOM1-204ENST00000463717 MEIS3Q99687 375 aa25.35■■□□□ 1.65
GCOM1-204ENST00000463717 MEGF6O75095 1541 aa25.34■■□□□ 1.65
GCOM1-204ENST00000463717 GNAI3P08754 354 aa25.34■■□□□ 1.65
GCOM1-204ENST00000463717 SOS2Q07890 1332 aaPredicted RBP25.34■■□□□ 1.65
GCOM1-204ENST00000463717 SLC4A10Q6U841 1118 aa25.33■■□□□ 1.65
GCOM1-204ENST00000463717 MPRIPQ6WCQ1 1025 aa25.33■■□□□ 1.65
GCOM1-204ENST00000463717 DAXXQ9UER7 740 aaPredicted RBP25.33■■□□□ 1.65
GCOM1-204ENST00000463717 SPG7Q9UQ90 795 aa25.33■■□□□ 1.65
GCOM1-204ENST00000463717 NLRP2Q9NX02 1062 aa25.32■■□□□ 1.64
GCOM1-204ENST00000463717 ZNF335Q9H4Z2 1342 aaPredicted RBP25.32■■□□□ 1.64
GCOM1-204ENST00000463717 HEG1Q9ULI3 1381 aa25.32■■□□□ 1.64
GCOM1-204ENST00000463717 F6X3S4 739 aa25.31■■□□□ 1.64
GCOM1-204ENST00000463717 TBC1D32Q96NH3 1257 aa25.31■■□□□ 1.64
GCOM1-204ENST00000463717 GNAI2P04899 355 aa25.3■■□□□ 1.64
GCOM1-204ENST00000463717 SEC24BO95487 1268 aa25.29■■□□□ 1.64
GCOM1-204ENST00000463717 CSB-PGBD3P0DP91 1061 aa25.29■■□□□ 1.64
GCOM1-204ENST00000463717 KDM6AO15550 1401 aaPredicted RBP25.29■■□□□ 1.64
GCOM1-204ENST00000463717 EIF5BO60841 1220 aaKnown RBP25.29■■□□□ 1.64
GCOM1-204ENST00000463717 SLAIN2Q9P270 581 aa25.29■■□□□ 1.64
GCOM1-204ENST00000463717 C5P01031 1676 aa25.28■■□□□ 1.64
GCOM1-204ENST00000463717 LAMB4A4D0S4 1761 aa25.27■■□□□ 1.64
GCOM1-204ENST00000463717 NECTIN2Q92692 538 aa25.27■■□□□ 1.64
GCOM1-204ENST00000463717 CABLES1Q8TDN4 633 aa25.26■■□□□ 1.63
GCOM1-204ENST00000463717 HSP90AB1P08238 724 aaKnown RBP25.25■■□□□ 1.63
GCOM1-204ENST00000463717 PHKG2P15735 406 aa25.25■■□□□ 1.63
GCOM1-204ENST00000463717 BECN1Q14457 450 aa25.25■■□□□ 1.63
GCOM1-204ENST00000463717 IFNL2Q8IZJ0 200 aa25.25■■□□□ 1.63
GCOM1-204ENST00000463717 DBF4Q9UBU7 674 aaPredicted RBP25.24■■□□□ 1.63
GCOM1-204ENST00000463717 COL5A2P05997 1499 aaPredicted RBP25.23■■□□□ 1.63
GCOM1-204ENST00000463717 CHPF2Q9P2E5 772 aa25.23■■□□□ 1.63
GCOM1-204ENST00000463717 KCNQ3O43525 872 aa25.23■■□□□ 1.63
GCOM1-204ENST00000463717 EIF2S2P20042 333 aaKnown RBP25.23■■□□□ 1.63
GCOM1-204ENST00000463717 CHRNA2Q15822 529 aa25.23■■□□□ 1.63
GCOM1-204ENST00000463717 WDR17Q8IZU2 1322 aa25.22■■□□□ 1.63
GCOM1-204ENST00000463717 GIGYF1O75420 1035 aaPredicted RBP25.22■■□□□ 1.63
GCOM1-204ENST00000463717 SLC52A2Q9HAB3 445 aa25.22■■□□□ 1.63
GCOM1-204ENST00000463717 SRCIN1Q9C0H9 1055 aa25.21■■□□□ 1.63
GCOM1-204ENST00000463717 DCAF5Q96JK2 942 aa25.2■■□□□ 1.63
GCOM1-204ENST00000463717 PHAXQ9H814 394 aaKnown RBP25.2■■□□□ 1.63
GCOM1-204ENST00000463717 PRDM11Q9NQV5 511 aa25.2■■□□□ 1.63
GCOM1-204ENST00000463717 TUBGCP6Q96RT7 1819 aa25.2■■□□□ 1.62
GCOM1-204ENST00000463717 DNAAF4Q8WXU2 420 aa25.2■■□□□ 1.62
GCOM1-204ENST00000463717 SHANK3Q9BYB0 1731 aa25.19■■□□□ 1.62
GCOM1-204ENST00000463717 UBTFL1P0CB47 393 aaPredicted RBP25.19■■□□□ 1.62
GCOM1-204ENST00000463717 PLEKHM2Q8IWE5 1019 aa25.19■■□□□ 1.62
GCOM1-204ENST00000463717 C22orf23Q9BZE7 217 aa25.18■■□□□ 1.62
GCOM1-204ENST00000463717 PAPPAQ13219 1627 aa25.17■■□□□ 1.62
GCOM1-204ENST00000463717 MFAP1P55081 439 aaKnown RBP25.17■■□□□ 1.62
GCOM1-204ENST00000463717 ATP8B2P98198 1209 aa25.17■■□□□ 1.62
GCOM1-204ENST00000463717 HYPKQ9NX55 129 aa25.17■■□□□ 1.62
GCOM1-204ENST00000463717 IBTKQ9P2D0 1353 aaPredicted RBP25.17■■□□□ 1.62
GCOM1-204ENST00000463717 UBR2Q8IWV8 1755 aa25.17■■□□□ 1.62
GCOM1-204ENST00000463717 TTC22Q5TAA0 569 aa25.17■■□□□ 1.62
GCOM1-204ENST00000463717 ADCY9O60503 1353 aa25.16■■□□□ 1.62
GCOM1-204ENST00000463717 CDC45O75419 566 aa25.16■■□□□ 1.62
GCOM1-204ENST00000463717 ZNF790Q6PG37 636 aa25.16■■□□□ 1.62
GCOM1-204ENST00000463717 USP44Q9H0E7 712 aa25.15■■□□□ 1.62
GCOM1-204ENST00000463717 GLI3P10071 1580 aa25.15■■□□□ 1.62
GCOM1-204ENST00000463717 PCDH11XQ9BZA7 1347 aa25.15■■□□□ 1.62
GCOM1-204ENST00000463717 PCDH11YQ9BZA8 1340 aa25.15■■□□□ 1.62
GCOM1-204ENST00000463717 HDAC5Q9UQL6 1122 aa25.14■■□□□ 1.62
GCOM1-204ENST00000463717 AHDC1Q5TGY3 1603 aaPredicted RBP25.14■■□□□ 1.61
GCOM1-204ENST00000463717 COL22A1Q8NFW1 1626 aaPredicted RBP25.14■■□□□ 1.61
GCOM1-204ENST00000463717 BEND3Q5T5X7 828 aa25.13■■□□□ 1.61
GCOM1-204ENST00000463717 DDX21Q9NR30 783 aaKnown RBP eCLIP25.13■■□□□ 1.61
GCOM1-204ENST00000463717 LRRFIP2Q9Y608 721 aaKnown RBP25.13■■□□□ 1.61
GCOM1-204ENST00000463717 ALDH1L1O75891 902 aa25.13■■□□□ 1.61
GCOM1-204ENST00000463717 DDX58O95786 925 aaKnown RBP25.13■■□□□ 1.61
GCOM1-204ENST00000463717 COL14A1Q05707 1796 aaKnown RBP25.12■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms