RNA–Protein interactions for RNA: ENST00000463230.5

R3HDM1-213, Transcript of R3H domain containing 1, humanhuman

TSL 2

Gene R3HDM1, Length 2,241 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-213ENST00000463230 PNNQ9H307 717 aaKnown RBP17.43■□□□□ 0.38
R3HDM1-213ENST00000463230 MAP3K5Q99683 1374 aa17.43■□□□□ 0.38
R3HDM1-213ENST00000463230 PRKAR2BP31323 418 aa17.43■□□□□ 0.38
R3HDM1-213ENST00000463230 RNMTO43148 476 aaKnown RBP17.41■□□□□ 0.38
R3HDM1-213ENST00000463230 ATG3Q9NT62 314 aa17.41■□□□□ 0.38
R3HDM1-213ENST00000463230 CICQ96RK0 1608 aaPredicted RBP17.41■□□□□ 0.38
R3HDM1-213ENST00000463230 PRKRIP1Q9H875 184 aaPredicted RBP17.41■□□□□ 0.38
R3HDM1-213ENST00000463230 RTN4Q9NQC3 1192 aaKnown RBP17.41■□□□□ 0.38
R3HDM1-213ENST00000463230 LOC102724428A0A0B4J2F2 783 aa17.4■□□□□ 0.38
R3HDM1-213ENST00000463230 GNAT3A8MTJ3 354 aa17.4■□□□□ 0.38
R3HDM1-213ENST00000463230 SIK1P57059 783 aa17.4■□□□□ 0.38
R3HDM1-213ENST00000463230 SLC52A2Q9HAB3 445 aa17.4■□□□□ 0.38
R3HDM1-213ENST00000463230 ASAP1Q9ULH1 1129 aa17.4■□□□□ 0.38
R3HDM1-213ENST00000463230 NEFMP07197 916 aa17.39■□□□□ 0.37
R3HDM1-213ENST00000463230 ZNF827Q17R98 1081 aa17.39■□□□□ 0.37
R3HDM1-213ENST00000463230 C4BP0C0L5 1744 aa17.39■□□□□ 0.37
R3HDM1-213ENST00000463230 TUBGCP6Q96RT7 1819 aa17.38■□□□□ 0.37
R3HDM1-213ENST00000463230 HTATSF1O43719 755 aaKnown RBP17.37■□□□□ 0.37
R3HDM1-213ENST00000463230 NFATC2IPQ8NCF5 419 aa17.37■□□□□ 0.37
R3HDM1-213ENST00000463230 FLAD1Q8NFF5 587 aa17.37■□□□□ 0.37
R3HDM1-213ENST00000463230 SLC16A10Q8TF71 515 aa17.37■□□□□ 0.37
R3HDM1-213ENST00000463230 PHACTR3Q96KR7 559 aa17.37■□□□□ 0.37
R3HDM1-213ENST00000463230 SPON1Q9HCB6 807 aa17.37■□□□□ 0.37
R3HDM1-213ENST00000463230 SIPA1L3O60292 1781 aaPredicted RBP17.37■□□□□ 0.37
R3HDM1-213ENST00000463230 LGR6Q9HBX8 967 aa17.36■□□□□ 0.37
R3HDM1-213ENST00000463230 CEMIPQ8WUJ3 1361 aa17.36■□□□□ 0.37
R3HDM1-213ENST00000463230 COL5A3P25940 1745 aaPredicted RBP17.35■□□□□ 0.37
R3HDM1-213ENST00000463230 TFCP2L1Q9NZI6 479 aa17.35■□□□□ 0.37
R3HDM1-213ENST00000463230 COL24A1Q17RW2 1714 aa17.35■□□□□ 0.37
R3HDM1-213ENST00000463230 MTFR1LQ9H019 292 aa17.35■□□□□ 0.37
R3HDM1-213ENST00000463230 PNPLA7Q6ZV29 1317 aa17.34■□□□□ 0.37
R3HDM1-213ENST00000463230 ATP6V1AP38606 617 aa17.34■□□□□ 0.37
R3HDM1-213ENST00000463230 KCNQ4P56696 695 aa17.34■□□□□ 0.37
R3HDM1-213ENST00000463230 PLEKHF1Q96S99 279 aa17.34■□□□□ 0.37
R3HDM1-213ENST00000463230 UBR2Q8IWV8 1755 aa17.34■□□□□ 0.37
R3HDM1-213ENST00000463230 UBR3Q6ZT12 1888 aa17.34■□□□□ 0.37
R3HDM1-213ENST00000463230 TEFQ10587 303 aa17.33■□□□□ 0.36
R3HDM1-213ENST00000463230 IL17REQ8NFR9 667 aa17.33■□□□□ 0.36
R3HDM1-213ENST00000463230 AK7Q96M32 723 aa17.33■□□□□ 0.36
R3HDM1-213ENST00000463230 RC3H1Q5TC82 1133 aaKnown RBP17.32■□□□□ 0.36
R3HDM1-213ENST00000463230 RTF1Q92541 710 aaKnown RBP17.32■□□□□ 0.36
R3HDM1-213ENST00000463230 CNTNAP4Q9C0A0 1308 aa17.32■□□□□ 0.36
R3HDM1-213ENST00000463230 MAPK8IP3Q9UPT6 1336 aa17.32■□□□□ 0.36
R3HDM1-213ENST00000463230 ITPK1Q13572 414 aa17.32■□□□□ 0.36
R3HDM1-213ENST00000463230 RBM42Q9BTD8 480 aaKnown RBP17.32■□□□□ 0.36
R3HDM1-213ENST00000463230 KCPQ6ZWJ8 1503 aa17.31■□□□□ 0.36
R3HDM1-213ENST00000463230 LINC00116Q8NCU8 138 aa17.31■□□□□ 0.36
R3HDM1-213ENST00000463230 TJP1Q07157 1748 aa17.31■□□□□ 0.36
R3HDM1-213ENST00000463230 SSFA2P28290 1259 aa17.31■□□□□ 0.36
R3HDM1-213ENST00000463230 WDR43Q15061 677 aaKnown RBP eCLIP17.31■□□□□ 0.36
R3HDM1-213ENST00000463230 NFE2L2Q16236 605 aa17.31■□□□□ 0.36
R3HDM1-213ENST00000463230 DLG5Q8TDM6 1919 aa17.3■□□□□ 0.36
R3HDM1-213ENST00000463230 VSIG10Q8N0Z9 540 aa17.3■□□□□ 0.36
R3HDM1-213ENST00000463230 SLC4A9Q96Q91 983 aa17.29■□□□□ 0.36
R3HDM1-213ENST00000463230 PDGFDQ9GZP0 370 aaPredicted RBP17.29■□□□□ 0.36
R3HDM1-213ENST00000463230 ZBTB7AO95365 584 aa17.28■□□□□ 0.36
R3HDM1-213ENST00000463230 TTC5Q8N0Z6 440 aa17.28■□□□□ 0.36
R3HDM1-213ENST00000463230 ANP32CO43423 234 aa17.28■□□□□ 0.36
R3HDM1-213ENST00000463230 PTCD1O75127 700 aaKnown RBP17.27■□□□□ 0.36
R3HDM1-213ENST00000463230 COL23A1Q86Y22 540 aaPredicted RBP17.27■□□□□ 0.36
R3HDM1-213ENST00000463230 PTGER2P43116 358 aa17.27■□□□□ 0.35
R3HDM1-213ENST00000463230 SGIP1Q9BQI5 828 aa17.27■□□□□ 0.35
R3HDM1-213ENST00000463230 LMOD3Q0VAK6 560 aa17.26■□□□□ 0.35
R3HDM1-213ENST00000463230 ZNF790Q6PG37 636 aa17.26■□□□□ 0.35
R3HDM1-213ENST00000463230 GNPATO15228 680 aa17.25■□□□□ 0.35
R3HDM1-213ENST00000463230 RUNDC1Q96C34 613 aa17.25■□□□□ 0.35
R3HDM1-213ENST00000463230 TEX13AQ9BXU3 409 aaPredicted RBP17.25■□□□□ 0.35
R3HDM1-213ENST00000463230 PPP1R1BQ9UD71 204 aaPredicted RBP17.25■□□□□ 0.35
R3HDM1-213ENST00000463230 RPS6KA4O75676 772 aa17.25■□□□□ 0.35
R3HDM1-213ENST00000463230 SLC39A6Q13433 755 aa17.25■□□□□ 0.35
R3HDM1-213ENST00000463230 PNISRQ8TF01 805 aaKnown RBP17.25■□□□□ 0.35
R3HDM1-213ENST00000463230 RTCBQ9Y3I0 505 aaKnown RBP17.25■□□□□ 0.35
R3HDM1-213ENST00000463230 POLD1P28340 1107 aa17.24■□□□□ 0.35
R3HDM1-213ENST00000463230 ATF5Q9Y2D1 282 aaPredicted RBP17.24■□□□□ 0.35
R3HDM1-213ENST00000463230 MYH14Q7Z406 1995 aaKnown RBP17.24■□□□□ 0.35
R3HDM1-213ENST00000463230 HEG1Q9ULI3 1381 aa17.24■□□□□ 0.35
R3HDM1-213ENST00000463230 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.24■□□□□ 0.35
R3HDM1-213ENST00000463230 BTBD11A6QL63 1104 aa17.24■□□□□ 0.35
R3HDM1-213ENST00000463230 MCM10Q7L590 875 aa17.24■□□□□ 0.35
R3HDM1-213ENST00000463230 TAF7Q15545 349 aaPredicted RBP17.23■□□□□ 0.35
R3HDM1-213ENST00000463230 FMNL2Q96PY5 1086 aa17.23■□□□□ 0.35
R3HDM1-213ENST00000463230 MSH5O43196 834 aa17.23■□□□□ 0.35
R3HDM1-213ENST00000463230 CRKLP46109 303 aaKnown RBP17.23■□□□□ 0.35
R3HDM1-213ENST00000463230 TMPOP42166 694 aaKnown RBP17.22■□□□□ 0.35
R3HDM1-213ENST00000463230 CCDC87Q9NVE4 849 aa17.22■□□□□ 0.35
R3HDM1-213ENST00000463230 ADAMTS8Q9UP79 889 aa17.22■□□□□ 0.35
R3HDM1-213ENST00000463230 CYP19A1P11511 503 aaPredicted RBP17.21■□□□□ 0.35
R3HDM1-213ENST00000463230 TRAPPC3LQ5T215 181 aa17.21■□□□□ 0.35
R3HDM1-213ENST00000463230 DNAJC10Q8IXB1 793 aa17.21■□□□□ 0.35
R3HDM1-213ENST00000463230 KDM3BQ7LBC6 1761 aa17.21■□□□□ 0.35
R3HDM1-213ENST00000463230 STARD3NLO95772 234 aa17.21■□□□□ 0.35
R3HDM1-213ENST00000463230 ZNF496Q96IT1 587 aaPredicted RBP17.21■□□□□ 0.35
R3HDM1-213ENST00000463230 BABAM1Q9NWV8 329 aa17.21■□□□□ 0.35
R3HDM1-213ENST00000463230 RIPK4P57078 832 aa17.2■□□□□ 0.34
R3HDM1-213ENST00000463230 ARXQ96QS3 562 aa17.2■□□□□ 0.34
R3HDM1-213ENST00000463230 PHF14O94880 888 aa17.2■□□□□ 0.34
R3HDM1-213ENST00000463230 DCTN1Q14203 1278 aa17.2■□□□□ 0.34
R3HDM1-213ENST00000463230 INTS5Q6P9B9 1019 aaKnown RBP17.2■□□□□ 0.34
R3HDM1-213ENST00000463230 C4AP0C0L4 1744 aa17.2■□□□□ 0.34
R3HDM1-213ENST00000463230 AMIGO3Q86WK7 504 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms