RNA–Protein interactions for RNA: ENST00000463222.1

VRK2-208, Transcript of vaccinia related kinase 2, humanhuman

TSL 3

Gene VRK2, Length 492 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-208ENST00000463222 KCTD15Q96SI1 283 aaPredicted RBP7.61□□□□□ -1.19
VRK2-208ENST00000463222 TERTO14746 1132 aaKnown RBP7.6□□□□□ -1.19
VRK2-208ENST00000463222 SNRPBP14678 240 aaKnown RBP7.6□□□□□ -1.19
VRK2-208ENST00000463222 MARSP56192 900 aaKnown RBP7.6□□□□□ -1.19
VRK2-208ENST00000463222 HPS1Q92902 700 aa7.6□□□□□ -1.19
VRK2-208ENST00000463222 MKNK1Q9BUB5 465 aa7.6□□□□□ -1.19
VRK2-208ENST00000463222 SEPT3Q9UH03 358 aa7.6□□□□□ -1.19
VRK2-208ENST00000463222 MYCP01106 439 aaPredicted RBP7.59□□□□□ -1.19
VRK2-208ENST00000463222 SCTRP47872 440 aa7.59□□□□□ -1.19
VRK2-208ENST00000463222 LCE2CQ5TA81 110 aa7.59□□□□□ -1.19
VRK2-208ENST00000463222 RC3H1Q5TC82 1133 aaKnown RBP7.59□□□□□ -1.19
VRK2-208ENST00000463222 CAPN12Q6ZSI9 719 aa7.59□□□□□ -1.19
VRK2-208ENST00000463222 SEPT12Q8IYM1 358 aa7.59□□□□□ -1.19
VRK2-208ENST00000463222 PURBQ96QR8 312 aaKnown RBP7.59□□□□□ -1.19
VRK2-208ENST00000463222 ERVH48-1M5A8F1 160 aa7.58□□□□□ -1.2
VRK2-208ENST00000463222 STAU1O95793 577 aaKnown RBP7.58□□□□□ -1.2
VRK2-208ENST00000463222 SKOR1P84550 965 aa7.58□□□□□ -1.2
VRK2-208ENST00000463222 VASH1Q7L8A9 365 aaPredicted RBP7.58□□□□□ -1.2
VRK2-208ENST00000463222 GTF3C2Q8WUA4 911 aaPredicted RBP7.58□□□□□ -1.2
VRK2-208ENST00000463222 CDV3Q9UKY7 258 aaKnown RBP7.58□□□□□ -1.2
VRK2-208ENST00000463222 RBM47A0AV96 593 aaKnown RBP7.57□□□□□ -1.2
VRK2-208ENST00000463222 H3BRB1 525 aa7.57□□□□□ -1.2
VRK2-208ENST00000463222 ARID5BQ14865 1188 aa7.57□□□□□ -1.2
VRK2-208ENST00000463222 INTS6LQ5JSJ4 861 aaKnown RBP7.57□□□□□ -1.2
VRK2-208ENST00000463222 ESF1Q9H501 851 aaKnown RBP7.57□□□□□ -1.2
VRK2-208ENST00000463222 TUT1Q9H6E5 874 aaKnown RBP7.57□□□□□ -1.2
VRK2-208ENST00000463222 ZNF358Q9NW07 568 aa7.57□□□□□ -1.2
VRK2-208ENST00000463222 ICMTO60725 284 aa7.56□□□□□ -1.2
VRK2-208ENST00000463222 VARSP26640 1264 aaKnown RBP7.56□□□□□ -1.2
VRK2-208ENST00000463222 WEE1P30291 646 aa7.56□□□□□ -1.2
VRK2-208ENST00000463222 FKBP5Q13451 457 aaPredicted RBP7.56□□□□□ -1.2
VRK2-208ENST00000463222 MTMR3Q13615 1198 aa7.56□□□□□ -1.2
VRK2-208ENST00000463222 NAA30Q147X3 362 aaPredicted RBP7.56□□□□□ -1.2
VRK2-208ENST00000463222 CCDC125Q86Z20 511 aa7.56□□□□□ -1.2
VRK2-208ENST00000463222 TMPRSS4Q9NRS4 437 aa7.56□□□□□ -1.2
VRK2-208ENST00000463222 ANKRD33BA6NCL7 494 aa7.55□□□□□ -1.2
VRK2-208ENST00000463222 TMEM229AB2RXF0 380 aa7.55□□□□□ -1.2
VRK2-208ENST00000463222 ERCC3P19447 782 aa7.55□□□□□ -1.2
VRK2-208ENST00000463222 GLYCTKQ8IVS8 523 aa7.55□□□□□ -1.2
VRK2-208ENST00000463222 DNMT3AQ9Y6K1 912 aaPredicted RBP7.55□□□□□ -1.2
VRK2-208ENST00000463222 NPAS3Q8IXF0 933 aa7.54□□□□□ -1.2
VRK2-208ENST00000463222 TNS4Q8IZW8 715 aa7.54□□□□□ -1.2
VRK2-208ENST00000463222 BCL2L13Q9BXK5 485 aa7.54□□□□□ -1.2
VRK2-208ENST00000463222 CYLDQ9NQC7 956 aa7.54□□□□□ -1.2
VRK2-208ENST00000463222 EGFL7Q9UHF1 273 aa7.54□□□□□ -1.2
VRK2-208ENST00000463222 SERTAD1Q9UHV2 236 aa7.54□□□□□ -1.2
VRK2-208ENST00000463222 M0R2N6 131 aa7.53□□□□□ -1.2
VRK2-208ENST00000463222 SIAH2O43255 324 aa7.53□□□□□ -1.2
VRK2-208ENST00000463222 ALDH1A1P00352 501 aa7.53□□□□□ -1.2
VRK2-208ENST00000463222 FKBP4Q02790 459 aaKnown RBP eCLIP7.53□□□□□ -1.2
VRK2-208ENST00000463222 ECM1Q16610 540 aa7.53□□□□□ -1.2
VRK2-208ENST00000463222 CC2D2BQ6DHV5 1058 aa7.53□□□□□ -1.2
VRK2-208ENST00000463222 EHBP1Q8NDI1 1231 aa7.53□□□□□ -1.2
VRK2-208ENST00000463222 OSBPL3Q9H4L5 887 aa7.53□□□□□ -1.2
VRK2-208ENST00000463222 ZNF16P17020 682 aaPredicted RBP7.52□□□□□ -1.21
VRK2-208ENST00000463222 ERVK-9P63128 1117 aa7.52□□□□□ -1.21
VRK2-208ENST00000463222 GIPC2Q8TF65 315 aa7.52□□□□□ -1.21
VRK2-208ENST00000463222 SCG3Q8WXD2 468 aaKnown RBP7.52□□□□□ -1.21
VRK2-208ENST00000463222 MAP4K5Q9Y4K4 846 aa7.52□□□□□ -1.21
VRK2-208ENST00000463222 ATAD2Q6PL18 1390 aa7.51□□□□□ -1.21
VRK2-208ENST00000463222 C21orf2O43822 256 aa7.51□□□□□ -1.21
VRK2-208ENST00000463222 FSHRP23945 695 aa7.51□□□□□ -1.21
VRK2-208ENST00000463222 MAPK1P28482 360 aa7.51□□□□□ -1.21
VRK2-208ENST00000463222 GRM5P41594 1212 aa7.51□□□□□ -1.21
VRK2-208ENST00000463222 SCNN1DP51172 638 aa7.51□□□□□ -1.21
VRK2-208ENST00000463222 GDF10P55107 478 aa7.51□□□□□ -1.21
VRK2-208ENST00000463222 NPAS4Q8IUM7 802 aa7.51□□□□□ -1.21
VRK2-208ENST00000463222 SLC16A10Q8TF71 515 aa7.51□□□□□ -1.21
VRK2-208ENST00000463222 CHMP7Q8WUX9 453 aaPredicted RBP7.51□□□□□ -1.21
VRK2-208ENST00000463222 MRRFQ96E11 262 aaKnown RBP7.51□□□□□ -1.21
VRK2-208ENST00000463222 KIAA1522Q9P206 1035 aaPredicted RBP7.51□□□□□ -1.21
VRK2-208ENST00000463222 PTCD1O75127 700 aaKnown RBP7.5□□□□□ -1.21
VRK2-208ENST00000463222 NXF1Q9UBU9 619 aaKnown RBP7.5□□□□□ -1.21
VRK2-208ENST00000463222 TLL2Q9Y6L7 1015 aa7.5□□□□□ -1.21
VRK2-208ENST00000463222 BACH1O14867 736 aa7.49□□□□□ -1.21
VRK2-208ENST00000463222 IGFBP4P22692 258 aa7.49□□□□□ -1.21
VRK2-208ENST00000463222 TAGLNQ01995 201 aaKnown RBP7.49□□□□□ -1.21
VRK2-208ENST00000463222 TBCELQ5QJ74 424 aa7.49□□□□□ -1.21
VRK2-208ENST00000463222 ZNF784Q8NCA9 323 aaPredicted RBP7.49□□□□□ -1.21
VRK2-208ENST00000463222 CDK15Q96Q40 435 aa7.49□□□□□ -1.21
VRK2-208ENST00000463222 TSPAN10Q9H1Z9 355 aaPredicted RBP7.49□□□□□ -1.21
VRK2-208ENST00000463222 ETNK1Q9HBU6 452 aa7.49□□□□□ -1.21
VRK2-208ENST00000463222 FAM181BA6NEQ2 426 aa7.48□□□□□ -1.21
VRK2-208ENST00000463222 IGSF3O75054 1194 aa7.48□□□□□ -1.21
VRK2-208ENST00000463222 INHAP05111 366 aa7.48□□□□□ -1.21
VRK2-208ENST00000463222 ARHGAP4P98171 946 aa7.48□□□□□ -1.21
VRK2-208ENST00000463222 SF3B2Q13435 895 aaKnown RBP7.48□□□□□ -1.21
VRK2-208ENST00000463222 TRIM46Q7Z4K8 759 aa7.48□□□□□ -1.21
VRK2-208ENST00000463222 DCTN4Q9UJW0 460 aa7.48□□□□□ -1.21
VRK2-208ENST00000463222 A0A1W2PRU2 124 aa7.47□□□□□ -1.21
VRK2-208ENST00000463222 CAPN5O15484 640 aaPredicted RBP7.47□□□□□ -1.21
VRK2-208ENST00000463222 FOXO3O43524 673 aa7.47□□□□□ -1.21
VRK2-208ENST00000463222 LILRA1O75019 489 aa7.47□□□□□ -1.21
VRK2-208ENST00000463222 BMP1P13497 986 aa7.47□□□□□ -1.21
VRK2-208ENST00000463222 ADD1P35611 737 aaKnown RBP7.47□□□□□ -1.21
VRK2-208ENST00000463222 DHX9Q08211 1270 aaKnown RBP7.47□□□□□ -1.21
VRK2-208ENST00000463222 MPNDQ8N594 471 aa7.47□□□□□ -1.21
VRK2-208ENST00000463222 VTI1AQ96AJ9 217 aa7.47□□□□□ -1.21
VRK2-208ENST00000463222 SAP130Q9H0E3 1048 aa7.47□□□□□ -1.21
VRK2-208ENST00000463222 WASF2Q9Y6W5 498 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms