RNA–Protein interactions for RNA: ENST00000462577.5

PDCD4-204, Transcript of programmed cell death 4, humanhuman

TSL 5

Gene PDCD4, Length 789 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD4-204ENST00000462577 USP47Q96K76 1375 aa7.34□□□□□ -1.23
PDCD4-204ENST00000462577 SOS2Q07890 1332 aaPredicted RBP7.34□□□□□ -1.23
PDCD4-204ENST00000462577 MINK1Q8N4C8 1332 aaPredicted RBP7.34□□□□□ -1.23
PDCD4-204ENST00000462577 PRR36Q9H6K5 1346 aa7.34□□□□□ -1.23
PDCD4-204ENST00000462577 COL14A1Q05707 1796 aaKnown RBP7.34□□□□□ -1.23
PDCD4-204ENST00000462577 GNPATO15228 680 aa7.34□□□□□ -1.23
PDCD4-204ENST00000462577 CARD11Q9BXL7 1154 aa7.34□□□□□ -1.23
PDCD4-204ENST00000462577 SBNO1A3KN83 1393 aa7.33□□□□□ -1.24
PDCD4-204ENST00000462577 BRD4O60885 1362 aaPredicted RBP7.33□□□□□ -1.24
PDCD4-204ENST00000462577 JCADQ9P266 1359 aa7.33□□□□□ -1.24
PDCD4-204ENST00000462577 NPHP3Q7Z494 1330 aa7.33□□□□□ -1.24
PDCD4-204ENST00000462577 FAM208AQ9UK61 1670 aaKnown RBP7.33□□□□□ -1.24
PDCD4-204ENST00000462577 TULP1O00294 542 aaPredicted RBP7.33□□□□□ -1.24
PDCD4-204ENST00000462577 PPP4CP60510 307 aa7.33□□□□□ -1.24
PDCD4-204ENST00000462577 SWT1Q5T5J6 900 aaKnown RBP7.33□□□□□ -1.24
PDCD4-204ENST00000462577 RBM46Q8TBY0 533 aaKnown RBP7.33□□□□□ -1.24
PDCD4-204ENST00000462577 PUS7Q96PZ0 661 aaKnown RBP7.33□□□□□ -1.24
PDCD4-204ENST00000462577 TNS3Q68CZ2 1445 aa7.33□□□□□ -1.24
PDCD4-204ENST00000462577 PPIP5K1Q6PFW1 1433 aa7.33□□□□□ -1.24
PDCD4-204ENST00000462577 COL18A1P39060 1754 aa7.33□□□□□ -1.24
PDCD4-204ENST00000462577 EVC2Q86UK5 1308 aa7.32□□□□□ -1.24
PDCD4-204ENST00000462577 MAP2P11137 1827 aaKnown RBP7.32□□□□□ -1.24
PDCD4-204ENST00000462577 LRP6O75581 1613 aa7.32□□□□□ -1.24
PDCD4-204ENST00000462577 SLC24A1O60721 1099 aa7.32□□□□□ -1.24
PDCD4-204ENST00000462577 RNF40O75150 1001 aa7.32□□□□□ -1.24
PDCD4-204ENST00000462577 SAFB2Q14151 953 aaKnown RBP eCLIP7.32□□□□□ -1.24
PDCD4-204ENST00000462577 ORAI2Q96SN7 254 aa7.32□□□□□ -1.24
PDCD4-204ENST00000462577 ATAD2Q6PL18 1390 aa7.32□□□□□ -1.24
PDCD4-204ENST00000462577 PNPLA6Q8IY17 1366 aa7.32□□□□□ -1.24
PDCD4-204ENST00000462577 NINLQ9Y2I6 1382 aa7.32□□□□□ -1.24
PDCD4-204ENST00000462577 LMO7Q8WWI1 1683 aa7.32□□□□□ -1.24
PDCD4-204ENST00000462577 CD163L1Q9NR16 1453 aa7.31□□□□□ -1.24
PDCD4-204ENST00000462577 RCCD1A6NED2 376 aa7.31□□□□□ -1.24
PDCD4-204ENST00000462577 CPSF1Q10570 1443 aaKnown RBP7.31□□□□□ -1.24
PDCD4-204ENST00000462577 ESCO1Q5FWF5 840 aa7.31□□□□□ -1.24
PDCD4-204ENST00000462577 DHX30Q7L2E3 1194 aaKnown RBP eCLIP7.31□□□□□ -1.24
PDCD4-204ENST00000462577 NUDT16Q96DE0 195 aaKnown RBP7.31□□□□□ -1.24
PDCD4-204ENST00000462577 TESK2Q96S53 571 aa7.31□□□□□ -1.24
PDCD4-204ENST00000462577 HIRIP3Q9BW71 556 aaPredicted RBP7.31□□□□□ -1.24
PDCD4-204ENST00000462577 CDK19Q9BWU1 502 aa7.31□□□□□ -1.24
PDCD4-204ENST00000462577 SLIT3O75094 1523 aa7.31□□□□□ -1.24
PDCD4-204ENST00000462577 SPATA31A6Q5VVP1 1343 aa7.3□□□□□ -1.24
PDCD4-204ENST00000462577 SSH2Q76I76 1423 aa7.3□□□□□ -1.24
PDCD4-204ENST00000462577 PLEKHG3A1L390 1219 aa7.3□□□□□ -1.24
PDCD4-204ENST00000462577 DNAJB2P25686 324 aa7.3□□□□□ -1.24
PDCD4-204ENST00000462577 PXYLP1Q8TE99 480 aa7.3□□□□□ -1.24
PDCD4-204ENST00000462577 LRRC59Q96AG4 307 aaKnown RBP7.3□□□□□ -1.24
PDCD4-204ENST00000462577 ABCC6O95255 1503 aa7.3□□□□□ -1.24
PDCD4-204ENST00000462577 BRWD3Q6RI45 1802 aa7.29□□□□□ -1.24
PDCD4-204ENST00000462577 USP6P35125 1406 aa7.29□□□□□ -1.24
PDCD4-204ENST00000462577 OATP04181 439 aa7.29□□□□□ -1.24
PDCD4-204ENST00000462577 NYAP1Q6ZVC0 841 aa7.29□□□□□ -1.24
PDCD4-204ENST00000462577 ARHGEF10O15013 1369 aa7.29□□□□□ -1.24
PDCD4-204ENST00000462577 DISP3Q9P2K9 1392 aa7.29□□□□□ -1.24
PDCD4-204ENST00000462577 SPATA31A3Q5VYP0 1347 aa7.28□□□□□ -1.24
PDCD4-204ENST00000462577 ST20-MTHFSA0A0A6YYL1 179 aa7.28□□□□□ -1.24
PDCD4-204ENST00000462577 PSME1Q06323 249 aa7.28□□□□□ -1.24
PDCD4-204ENST00000462577 METTL3Q86U44 580 aaKnown RBP7.28□□□□□ -1.24
PDCD4-204ENST00000462577 SLF2Q8IX21 1173 aa7.28□□□□□ -1.24
PDCD4-204ENST00000462577 TMEM134Q9H6X4 195 aa7.28□□□□□ -1.24
PDCD4-204ENST00000462577 RGPD2P0DJD1 1756 aa7.28□□□□□ -1.24
PDCD4-204ENST00000462577 ACEP12821 1306 aa7.27□□□□□ -1.24
PDCD4-204ENST00000462577 NFAT5O94916 1531 aa7.27□□□□□ -1.25
PDCD4-204ENST00000462577 FOXO3O43524 673 aa7.27□□□□□ -1.25
PDCD4-204ENST00000462577 SRPK2P78362 688 aaKnown RBP7.27□□□□□ -1.25
PDCD4-204ENST00000462577 LMOD2Q6P5Q4 547 aa7.27□□□□□ -1.25
PDCD4-204ENST00000462577 KRT28Q7Z3Y7 464 aa7.27□□□□□ -1.25
PDCD4-204ENST00000462577 VIRMAQ69YN4 1812 aaKnown RBP7.27□□□□□ -1.25
PDCD4-204ENST00000462577 EDC4Q6P2E9 1401 aaKnown RBP7.27□□□□□ -1.25
PDCD4-204ENST00000462577 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP7.26□□□□□ -1.25
PDCD4-204ENST00000462577 EIF4G2P78344 907 aaKnown RBP eCLIP7.26□□□□□ -1.25
PDCD4-204ENST00000462577 TMF1P82094 1093 aa7.26□□□□□ -1.25
PDCD4-204ENST00000462577 NLRP7Q8WX94 980 aa7.26□□□□□ -1.25
PDCD4-204ENST00000462577 DDX17Q92841 729 aaKnown RBP7.26□□□□□ -1.25
PDCD4-204ENST00000462577 PARP4Q9UKK3 1724 aaKnown RBP7.26□□□□□ -1.25
PDCD4-204ENST00000462577 CAMTA1Q9Y6Y1 1673 aa7.25□□□□□ -1.25
PDCD4-204ENST00000462577 ANKRD36BQ8N2N9 1353 aa7.25□□□□□ -1.25
PDCD4-204ENST00000462577 SLC4A3P48751 1232 aa7.25□□□□□ -1.25
PDCD4-204ENST00000462577 APLP1P51693 650 aa7.25□□□□□ -1.25
PDCD4-204ENST00000462577 CDCA8Q53HL2 280 aa7.25□□□□□ -1.25
PDCD4-204ENST00000462577 NGDNQ8NEJ9 315 aaKnown RBP7.25□□□□□ -1.25
PDCD4-204ENST00000462577 PMFBP1Q8TBY8 1022 aa7.25□□□□□ -1.25
PDCD4-204ENST00000462577 PHOX2BQ99453 314 aa7.25□□□□□ -1.25
PDCD4-204ENST00000462577 SLIT2O94813 1529 aa7.25□□□□□ -1.25
PDCD4-204ENST00000462577 TTC21AQ8NDW8 1320 aa7.25□□□□□ -1.25
PDCD4-204ENST00000462577 A0A1W2PP64 1363 aa7.24□□□□□ -1.25
PDCD4-204ENST00000462577 USP31Q70CQ4 1352 aa7.24□□□□□ -1.25
PDCD4-204ENST00000462577 KTN1Q86UP2 1357 aaKnown RBP7.24□□□□□ -1.25
PDCD4-204ENST00000462577 ITGBL1O95965 494 aaPredicted RBP7.24□□□□□ -1.25
PDCD4-204ENST00000462577 CABP1Q9NZU7 370 aa7.24□□□□□ -1.25
PDCD4-204ENST00000462577 THSD7AQ9UPZ6 1657 aa7.24□□□□□ -1.25
PDCD4-204ENST00000462577 SBF2Q86WG5 1849 aa7.24□□□□□ -1.25
PDCD4-204ENST00000462577 GLI3P10071 1580 aa7.24□□□□□ -1.25
PDCD4-204ENST00000462577 USP19O94966 1318 aa7.24□□□□□ -1.25
PDCD4-204ENST00000462577 PEAK1Q9H792 1746 aa7.24□□□□□ -1.25
PDCD4-204ENST00000462577 HSPA5P11021 654 aaKnown RBP7.23□□□□□ -1.25
PDCD4-204ENST00000462577 XPCQ01831 940 aaPredicted RBP7.23□□□□□ -1.25
PDCD4-204ENST00000462577 KCNC4Q03721 635 aa7.23□□□□□ -1.25
PDCD4-204ENST00000462577 MAP2K5Q13163 448 aa7.23□□□□□ -1.25
PDCD4-204ENST00000462577 OVOS2A0A0J9YW53 1432 aa7.23□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms