RNA–Protein interactions for RNA: ENST00000462553.2

CDC42BPA-210, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 430 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-210ENST00000462553 MYH14Q7Z406 1995 aaKnown RBP11.03□□□□□ -0.64
CDC42BPA-210ENST00000462553 SENP3-EIF4A1A0A087X0R7 540 aa11.02□□□□□ -0.65
CDC42BPA-210ENST00000462553 SP7Q8TDD2 431 aaPredicted RBP11.02□□□□□ -0.65
CDC42BPA-210ENST00000462553 N4BP2Q86UW6 1770 aaPredicted RBP11.02□□□□□ -0.65
CDC42BPA-210ENST00000462553 ADCY9O60503 1353 aa11.02□□□□□ -0.65
CDC42BPA-210ENST00000462553 MPRIPQ6WCQ1 1025 aa11.01□□□□□ -0.65
CDC42BPA-210ENST00000462553 ATP10DQ9P241 1426 aa11.01□□□□□ -0.65
CDC42BPA-210ENST00000462553 HSPA5P11021 654 aaKnown RBP11□□□□□ -0.65
CDC42BPA-210ENST00000462553 NKX1-1Q15270 411 aaPredicted RBP11□□□□□ -0.65
CDC42BPA-210ENST00000462553 SMIM5Q71RC9 77 aa11□□□□□ -0.65
CDC42BPA-210ENST00000462553 PIGBQ92521 554 aa11□□□□□ -0.65
CDC42BPA-210ENST00000462553 WASHC2AQ641Q2 1341 aa11□□□□□ -0.65
CDC42BPA-210ENST00000462553 KDRP35968 1356 aa11□□□□□ -0.65
CDC42BPA-210ENST00000462553 GIGYF1O75420 1035 aaPredicted RBP10.99□□□□□ -0.65
CDC42BPA-210ENST00000462553 CDCA8Q53HL2 280 aa10.99□□□□□ -0.65
CDC42BPA-210ENST00000462553 LINC00116Q8NCU8 138 aa10.99□□□□□ -0.65
CDC42BPA-210ENST00000462553 CD2APQ9Y5K6 639 aa10.99□□□□□ -0.65
CDC42BPA-210ENST00000462553 TJP1Q07157 1748 aa10.98□□□□□ -0.65
CDC42BPA-210ENST00000462553 GRIN3BO60391 1043 aa10.98□□□□□ -0.65
CDC42BPA-210ENST00000462553 FLAD1Q8NFF5 587 aa10.98□□□□□ -0.65
CDC42BPA-210ENST00000462553 SMARCC1Q92922 1105 aaPredicted RBP10.98□□□□□ -0.65
CDC42BPA-210ENST00000462553 AK7Q96M32 723 aa10.98□□□□□ -0.65
CDC42BPA-210ENST00000462553 EYA1Q99502 592 aa10.98□□□□□ -0.65
CDC42BPA-210ENST00000462553 PLEKHG2Q9H7P9 1386 aa10.98□□□□□ -0.65
CDC42BPA-210ENST00000462553 SCN11AQ9UI33 1791 aa10.98□□□□□ -0.65
CDC42BPA-210ENST00000462553 LOC102724428A0A0B4J2F2 783 aa10.97□□□□□ -0.65
CDC42BPA-210ENST00000462553 SIK1P57059 783 aa10.97□□□□□ -0.65
CDC42BPA-210ENST00000462553 EIF4G2P78344 907 aaKnown RBP eCLIP10.97□□□□□ -0.65
CDC42BPA-210ENST00000462553 ITPK1Q13572 414 aa10.97□□□□□ -0.65
CDC42BPA-210ENST00000462553 ARFGEF1Q9Y6D6 1849 aa10.97□□□□□ -0.65
CDC42BPA-210ENST00000462553 ADAMTS7Q9UKP4 1686 aa10.96□□□□□ -0.65
CDC42BPA-210ENST00000462553 IGSF1Q8N6C5 1336 aa10.96□□□□□ -0.65
CDC42BPA-210ENST00000462553 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.96□□□□□ -0.65
CDC42BPA-210ENST00000462553 PHF14O94880 888 aa10.96□□□□□ -0.65
CDC42BPA-210ENST00000462553 PHKG2P15735 406 aa10.96□□□□□ -0.65
CDC42BPA-210ENST00000462553 SSFA2P28290 1259 aa10.96□□□□□ -0.65
CDC42BPA-210ENST00000462553 FOXD4L1Q9NU39 408 aa10.96□□□□□ -0.65
CDC42BPA-210ENST00000462553 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.96□□□□□ -0.652e-7■■□□□ 14
CDC42BPA-210ENST00000462553 POLKQ9UBT6 870 aa10.96□□□□□ -0.65
CDC42BPA-210ENST00000462553 ASAP1Q9ULH1 1129 aa10.96□□□□□ -0.65
CDC42BPA-210ENST00000462553 SPG7Q9UQ90 795 aa10.96□□□□□ -0.65
CDC42BPA-210ENST00000462553 PXDNLA1KZ92 1463 aa10.95□□□□□ -0.66
CDC42BPA-210ENST00000462553 KDM6AO15550 1401 aaPredicted RBP10.95□□□□□ -0.66
CDC42BPA-210ENST00000462553 PPM1GO15355 546 aaPredicted RBP10.95□□□□□ -0.66
CDC42BPA-210ENST00000462553 EIF4A2Q14240 407 aaKnown RBP10.95□□□□□ -0.66
CDC42BPA-210ENST00000462553 PCNTO95613 3336 aa10.94□□□□□ -0.66
CDC42BPA-210ENST00000462553 C10orf71Q711Q0 1435 aa10.94□□□□□ -0.66
CDC42BPA-210ENST00000462553 HMGB2P26583 209 aaKnown RBP10.94□□□□□ -0.66
CDC42BPA-210ENST00000462553 SLC4A9Q96Q91 983 aa10.94□□□□□ -0.66
CDC42BPA-210ENST00000462553 ATG3Q9NT62 314 aa10.94□□□□□ -0.66
CDC42BPA-210ENST00000462553 TMOD3Q9NYL9 352 aa10.94□□□□□ -0.66
CDC42BPA-210ENST00000462553 IFNL2Q8IZJ0 200 aa10.93□□□□□ -0.66
CDC42BPA-210ENST00000462553 SBF1O95248 1867 aa10.92□□□□□ -0.66
CDC42BPA-210ENST00000462553 GNPATO15228 680 aa10.92□□□□□ -0.66
CDC42BPA-210ENST00000462553 WWC3Q9ULE0 1092 aa10.92□□□□□ -0.66
CDC42BPA-210ENST00000462553 AFDNP55196 1824 aaKnown RBP10.91□□□□□ -0.66
CDC42BPA-210ENST00000462553 ATP6V1AP38606 617 aa10.91□□□□□ -0.66
CDC42BPA-210ENST00000462553 MMP10P09238 476 aa10.9□□□□□ -0.66
CDC42BPA-210ENST00000462553 TNNT2P45379 298 aaPredicted RBP10.9□□□□□ -0.66
CDC42BPA-210ENST00000462553 GPBP1L1Q9HC44 474 aaPredicted RBP10.9□□□□□ -0.66
CDC42BPA-210ENST00000462553 UBR2Q8IWV8 1755 aa10.9□□□□□ -0.67
CDC42BPA-210ENST00000462553 DLEC1Q9Y238 1755 aa10.9□□□□□ -0.67
CDC42BPA-210ENST00000462553 KIF7Q2M1P5 1343 aa10.89□□□□□ -0.67
CDC42BPA-210ENST00000462553 CNTNAP4Q9C0A0 1308 aa10.89□□□□□ -0.67
CDC42BPA-210ENST00000462553 MRC1P22897 1456 aa10.89□□□□□ -0.67
CDC42BPA-210ENST00000462553 REM2Q8IYK8 340 aaPredicted RBP10.89□□□□□ -0.67
CDC42BPA-210ENST00000462553 ZNF526Q8TF50 670 aaPredicted RBP10.89□□□□□ -0.67
CDC42BPA-210ENST00000462553 ERVV-2B6SEH9 535 aa10.88□□□□□ -0.67
CDC42BPA-210ENST00000462553 AEBP1Q8IUX7 1158 aa10.88□□□□□ -0.67
CDC42BPA-210ENST00000462553 POLR3GLQ9BT43 218 aa10.88□□□□□ -0.67
CDC42BPA-210ENST00000462553 NRXN2Q9P2S2 1712 aa10.88□□□□□ -0.67
CDC42BPA-210ENST00000462553 WDR90Q96KV7 1748 aa10.87□□□□□ -0.67
CDC42BPA-210ENST00000462553 KIF3CO14782 793 aa10.87□□□□□ -0.67
CDC42BPA-210ENST00000462553 GYS1P13807 737 aa10.87□□□□□ -0.67
CDC42BPA-210ENST00000462553 DCAF5Q96JK2 942 aa10.87□□□□□ -0.67
CDC42BPA-210ENST00000462553 SIPA1L3O60292 1781 aaPredicted RBP10.86□□□□□ -0.67
CDC42BPA-210ENST00000462553 KCPQ6ZWJ8 1503 aa10.86□□□□□ -0.67
CDC42BPA-210ENST00000462553 HSPA6P17066 643 aa10.86□□□□□ -0.67
CDC42BPA-210ENST00000462553 RC3H1Q5TC82 1133 aaKnown RBP10.86□□□□□ -0.67
CDC42BPA-210ENST00000462553 ZNF530Q6P9A1 599 aaPredicted RBP10.86□□□□□ -0.67
CDC42BPA-210ENST00000462553 PIP4P2Q8N4L2 257 aa10.86□□□□□ -0.67
CDC42BPA-210ENST00000462553 ARHGEF1Q92888 912 aaKnown RBP10.86□□□□□ -0.67
CDC42BPA-210ENST00000462553 PANK3Q9H999 370 aa10.86□□□□□ -0.67
CDC42BPA-210ENST00000462553 RTCBQ9Y3I0 505 aaKnown RBP10.86□□□□□ -0.67
CDC42BPA-210ENST00000462553 CCDC88AQ3V6T2 1871 aa10.86□□□□□ -0.67
CDC42BPA-210ENST00000462553 TNRC6CQ9HCJ0 1690 aaKnown RBP10.85□□□□□ -0.67
CDC42BPA-210ENST00000462553 RPS6KA4O75676 772 aa10.85□□□□□ -0.67
CDC42BPA-210ENST00000462553 HSP90AB1P08238 724 aaKnown RBP10.85□□□□□ -0.67
CDC42BPA-210ENST00000462553 TRAPPC3LQ5T215 181 aa10.85□□□□□ -0.67
CDC42BPA-210ENST00000462553 A0A0G2JLW4 131 aa10.84□□□□□ -0.67
CDC42BPA-210ENST00000462553 HAX1O00165 279 aa10.84□□□□□ -0.67
CDC42BPA-210ENST00000462553 DPEP1P16444 411 aa10.84□□□□□ -0.67
CDC42BPA-210ENST00000462553 TGFB2P61812 414 aa10.84□□□□□ -0.67
CDC42BPA-210ENST00000462553 AMOTQ4VCS5 1084 aa10.84□□□□□ -0.67
CDC42BPA-210ENST00000462553 PLEKHO1Q53GL0 409 aaPredicted RBP10.84□□□□□ -0.67
CDC42BPA-210ENST00000462553 NLGN1Q8N2Q7 840 aa10.84□□□□□ -0.67
CDC42BPA-210ENST00000462553 ANKRD31Q8N7Z5 1873 aa10.84□□□□□ -0.67
CDC42BPA-210ENST00000462553 TIAM2Q8IVF5 1701 aa10.84□□□□□ -0.67
CDC42BPA-210ENST00000462553 SCN7AQ01118 1682 aa10.83□□□□□ -0.68
CDC42BPA-210ENST00000462553 KCNA3P22001 575 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms