RNA–Protein interactions for RNA: ENST00000462356.5

LRRC47-202, Transcript of leucine rich repeat containing 47, humanhuman

TSL 2

Gene LRRC47, Length 575 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC47-202ENST00000462356 CASZ1Q86V15 1759 aa17.8■□□□□ 0.44
LRRC47-202ENST00000462356 PTCD1O75127 700 aaKnown RBP17.79■□□□□ 0.44
LRRC47-202ENST00000462356 FCHSD2O94868 740 aa17.79■□□□□ 0.44
LRRC47-202ENST00000462356 ITPK1Q13572 414 aa17.79■□□□□ 0.44
LRRC47-202ENST00000462356 GAS2L2Q8NHY3 880 aa17.79■□□□□ 0.44
LRRC47-202ENST00000462356 SLC4A9Q96Q91 983 aa17.79■□□□□ 0.44
LRRC47-202ENST00000462356 PRKRIP1Q9H875 184 aaPredicted RBP17.79■□□□□ 0.44
LRRC47-202ENST00000462356 SLC52A2Q9HAB3 445 aa17.79■□□□□ 0.44
LRRC47-202ENST00000462356 C5P01031 1676 aa17.79■□□□□ 0.44
LRRC47-202ENST00000462356 TUBGCP6Q96RT7 1819 aa17.79■□□□□ 0.44
LRRC47-202ENST00000462356 PNPLA7Q6ZV29 1317 aa17.78■□□□□ 0.44
LRRC47-202ENST00000462356 TAF1LQ8IZX4 1826 aa17.78■□□□□ 0.44
LRRC47-202ENST00000462356 GNAT3A8MTJ3 354 aa17.78■□□□□ 0.44
LRRC47-202ENST00000462356 SLC39A6Q13433 755 aa17.78■□□□□ 0.44
LRRC47-202ENST00000462356 LINC00116Q8NCU8 138 aa17.78■□□□□ 0.44
LRRC47-202ENST00000462356 IL17REQ8NFR9 667 aa17.78■□□□□ 0.44
LRRC47-202ENST00000462356 SPON1Q9HCB6 807 aa17.78■□□□□ 0.44
LRRC47-202ENST00000462356 MAP3K5Q99683 1374 aa17.78■□□□□ 0.44
LRRC47-202ENST00000462356 LRP5O75197 1615 aa17.77■□□□□ 0.44
LRRC47-202ENST00000462356 MSH5O43196 834 aa17.77■□□□□ 0.44
LRRC47-202ENST00000462356 AMIGO3Q86WK7 504 aa17.76■□□□□ 0.43
LRRC47-202ENST00000462356 DCTN1Q14203 1278 aa17.75■□□□□ 0.43
LRRC47-202ENST00000462356 COL23A1Q86Y22 540 aaPredicted RBP17.75■□□□□ 0.43
LRRC47-202ENST00000462356 C4BP0C0L5 1744 aa17.75■□□□□ 0.43
LRRC47-202ENST00000462356 PHF14O94880 888 aa17.74■□□□□ 0.43
LRRC47-202ENST00000462356 MCM10Q7L590 875 aa17.74■□□□□ 0.43
LRRC47-202ENST00000462356 AK7Q96M32 723 aa17.74■□□□□ 0.43
LRRC47-202ENST00000462356 PLEKHF1Q96S99 279 aa17.74■□□□□ 0.43
LRRC47-202ENST00000462356 ADAMTS7Q9UKP4 1686 aa17.74■□□□□ 0.43
LRRC47-202ENST00000462356 TEFQ10587 303 aa17.73■□□□□ 0.43
LRRC47-202ENST00000462356 MRC1P22897 1456 aa17.72■□□□□ 0.43
LRRC47-202ENST00000462356 PPP1R1BQ9UD71 204 aaPredicted RBP17.72■□□□□ 0.43
LRRC47-202ENST00000462356 GNPATO15228 680 aa17.71■□□□□ 0.43
LRRC47-202ENST00000462356 NEFMP07197 916 aa17.71■□□□□ 0.43
LRRC47-202ENST00000462356 PTGER2P43116 358 aa17.71■□□□□ 0.43
LRRC47-202ENST00000462356 CCDC146Q8IYE0 955 aa17.71■□□□□ 0.43
LRRC47-202ENST00000462356 RTF1Q92541 710 aaKnown RBP17.71■□□□□ 0.43
LRRC47-202ENST00000462356 MTFR1LQ9H019 292 aa17.71■□□□□ 0.43
LRRC47-202ENST00000462356 QSER1Q2KHR3 1735 aa17.71■□□□□ 0.43
LRRC47-202ENST00000462356 CCDC184Q52MB2 194 aa17.7■□□□□ 0.42
LRRC47-202ENST00000462356 MSL1Q68DK7 614 aa17.7■□□□□ 0.42
LRRC47-202ENST00000462356 KCNQ3O43525 872 aa17.69■□□□□ 0.42
LRRC47-202ENST00000462356 DNAJC10Q8IXB1 793 aa17.69■□□□□ 0.42
LRRC47-202ENST00000462356 MAPK8IP3Q9UPT6 1336 aa17.69■□□□□ 0.42
LRRC47-202ENST00000462356 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.68■□□□□ 0.42
LRRC47-202ENST00000462356 WDR43Q15061 677 aaKnown RBP eCLIP17.68■□□□□ 0.42
LRRC47-202ENST00000462356 UBR3Q6ZT12 1888 aa17.68■□□□□ 0.42
LRRC47-202ENST00000462356 THUMPD2Q9BTF0 503 aaKnown RBP17.68■□□□□ 0.42
LRRC47-202ENST00000462356 ADAMTS8Q9UP79 889 aa17.68■□□□□ 0.42
LRRC47-202ENST00000462356 DLG5Q8TDM6 1919 aa17.68■□□□□ 0.42
LRRC47-202ENST00000462356 CEMIPQ8WUJ3 1361 aa17.67■□□□□ 0.42
LRRC47-202ENST00000462356 TJP1Q07157 1748 aa17.67■□□□□ 0.42
LRRC47-202ENST00000462356 NFE2L2Q16236 605 aa17.67■□□□□ 0.42
LRRC47-202ENST00000462356 TTC5Q8N0Z6 440 aa17.67■□□□□ 0.42
LRRC47-202ENST00000462356 SGIP1Q9BQI5 828 aa17.67■□□□□ 0.42
LRRC47-202ENST00000462356 PNNQ9H307 717 aaKnown RBP17.67■□□□□ 0.42
LRRC47-202ENST00000462356 SRCAPQ6ZRS2 3230 aa17.67■□□□□ 0.42
LRRC47-202ENST00000462356 KCPQ6ZWJ8 1503 aa17.67■□□□□ 0.42
LRRC47-202ENST00000462356 SIPA1L3O60292 1781 aaPredicted RBP17.66■□□□□ 0.42
LRRC47-202ENST00000462356 BTBD11A6QL63 1104 aa17.66■□□□□ 0.42
LRRC47-202ENST00000462356 CRKLP46109 303 aaKnown RBP17.66■□□□□ 0.42
LRRC47-202ENST00000462356 SLC16A10Q8TF71 515 aa17.66■□□□□ 0.42
LRRC47-202ENST00000462356 ZNF496Q96IT1 587 aaPredicted RBP17.66■□□□□ 0.42
LRRC47-202ENST00000462356 MIS18AQ9NYP9 233 aa17.66■□□□□ 0.42
LRRC47-202ENST00000462356 RRP7AQ9Y3A4 280 aaKnown RBP17.66■□□□□ 0.42
LRRC47-202ENST00000462356 COL5A3P25940 1745 aaPredicted RBP17.66■□□□□ 0.42
LRRC47-202ENST00000462356 ZNF831Q5JPB2 1677 aa17.65■□□□□ 0.42
LRRC47-202ENST00000462356 HMGB2P26583 209 aaKnown RBP17.65■□□□□ 0.42
LRRC47-202ENST00000462356 NEUROD2Q15784 382 aa17.65■□□□□ 0.42
LRRC47-202ENST00000462356 ZNF790Q6PG37 636 aa17.65■□□□□ 0.42
LRRC47-202ENST00000462356 RTCBQ9Y3I0 505 aaKnown RBP17.65■□□□□ 0.42
LRRC47-202ENST00000462356 MYH14Q7Z406 1995 aaKnown RBP17.64■□□□□ 0.41
LRRC47-202ENST00000462356 ANP32CO43423 234 aa17.64■□□□□ 0.41
LRRC47-202ENST00000462356 KLHL34Q8N239 644 aa17.64■□□□□ 0.41
LRRC47-202ENST00000462356 FLAD1Q8NFF5 587 aa17.64■□□□□ 0.41
LRRC47-202ENST00000462356 HTATSF1O43719 755 aaKnown RBP17.63■□□□□ 0.41
LRRC47-202ENST00000462356 RPS6KA4O75676 772 aa17.63■□□□□ 0.41
LRRC47-202ENST00000462356 SSFA2P28290 1259 aa17.63■□□□□ 0.41
LRRC47-202ENST00000462356 RIPK4P57078 832 aa17.63■□□□□ 0.41
LRRC47-202ENST00000462356 TRAPPC3LQ5T215 181 aa17.63■□□□□ 0.41
LRRC47-202ENST00000462356 RC3H1Q5TC82 1133 aaKnown RBP17.63■□□□□ 0.41
LRRC47-202ENST00000462356 ARHGEF1Q92888 912 aaKnown RBP17.63■□□□□ 0.41
LRRC47-202ENST00000462356 ARXQ96QS3 562 aa17.63■□□□□ 0.41
LRRC47-202ENST00000462356 CNTNAP4Q9C0A0 1308 aa17.63■□□□□ 0.41
LRRC47-202ENST00000462356 UBR2Q8IWV8 1755 aa17.62■□□□□ 0.41
LRRC47-202ENST00000462356 SENP3-EIF4A1A0A087X0R7 540 aa17.62■□□□□ 0.41
LRRC47-202ENST00000462356 CYP19A1P11511 503 aaPredicted RBP17.62■□□□□ 0.41
LRRC47-202ENST00000462356 POLD1P28340 1107 aa17.62■□□□□ 0.41
LRRC47-202ENST00000462356 TMPOP42166 694 aaKnown RBP17.62■□□□□ 0.41
LRRC47-202ENST00000462356 INTS5Q6P9B9 1019 aaKnown RBP17.62■□□□□ 0.41
LRRC47-202ENST00000462356 FHDC1Q9C0D6 1143 aaPredicted RBP17.62■□□□□ 0.41
LRRC47-202ENST00000462356 PRAMEF22A3QJZ6 481 aa17.61■□□□□ 0.41
LRRC47-202ENST00000462356 RUNDC1Q96C34 613 aa17.61■□□□□ 0.41
LRRC47-202ENST00000462356 TAF7Q15545 349 aaPredicted RBP17.6■□□□□ 0.41
LRRC47-202ENST00000462356 FMNL2Q96PY5 1086 aa17.6■□□□□ 0.41
LRRC47-202ENST00000462356 CCDC87Q9NVE4 849 aa17.6■□□□□ 0.41
LRRC47-202ENST00000462356 ZBTB1Q9Y2K1 713 aa17.6■□□□□ 0.41
LRRC47-202ENST00000462356 HEG1Q9ULI3 1381 aa17.6■□□□□ 0.41
LRRC47-202ENST00000462356 CANXP27824 592 aaKnown RBP17.59■□□□□ 0.41
LRRC47-202ENST00000462356 VSIG10Q8N0Z9 540 aa17.59■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms