RNA–Protein interactions for RNA: ENST00000462352.5

CPNE1-221, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 625 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-221ENST00000462352 DEFB132Q7Z7B7 95 aa15.53■□□□□ 0.08
CPNE1-221ENST00000462352 SENP3-EIF4A1A0A087X0R7 540 aa15.52■□□□□ 0.08
CPNE1-221ENST00000462352 PLSCR1O15162 318 aa15.52■□□□□ 0.08
CPNE1-221ENST00000462352 EN1Q05925 392 aaPredicted RBP15.52■□□□□ 0.08
CPNE1-221ENST00000462352 LMOD3Q0VAK6 560 aa15.52■□□□□ 0.08
CPNE1-221ENST00000462352 THUMPD2Q9BTF0 503 aaKnown RBP15.51■□□□□ 0.07
CPNE1-221ENST00000462352 TRIM35Q9UPQ4 493 aa15.51■□□□□ 0.07
CPNE1-221ENST00000462352 CAMKK2Q96RR4 588 aa15.5■□□□□ 0.07
CPNE1-221ENST00000462352 ATG3Q9NT62 314 aa15.5■□□□□ 0.07
CPNE1-221ENST00000462352 ASAP1Q9ULH1 1129 aa15.5■□□□□ 0.07
CPNE1-221ENST00000462352 EZH2Q15910 746 aaKnown RBP15.49■□□□□ 0.07
CPNE1-221ENST00000462352 SMARCC1Q92922 1105 aaPredicted RBP15.49■□□□□ 0.07
CPNE1-221ENST00000462352 RGPD3A6NKT7 1758 aaPredicted RBP15.49■□□□□ 0.07
CPNE1-221ENST00000462352 RGPD4Q7Z3J3 1758 aa15.49■□□□□ 0.07
CPNE1-221ENST00000462352 PALLDQ8WX93 1383 aa15.49■□□□□ 0.07
CPNE1-221ENST00000462352 SIPA1L3O60292 1781 aaPredicted RBP15.48■□□□□ 0.07
CPNE1-221ENST00000462352 SLC39A6Q13433 755 aa15.47■□□□□ 0.07
CPNE1-221ENST00000462352 NCBP3Q53F19 620 aaKnown RBP15.47■□□□□ 0.07
CPNE1-221ENST00000462352 PROM2Q8N271 834 aa15.47■□□□□ 0.07
CPNE1-221ENST00000462352 BTBD11A6QL63 1104 aa15.46■□□□□ 0.07
CPNE1-221ENST00000462352 TAF7Q15545 349 aaPredicted RBP15.46■□□□□ 0.07
CPNE1-221ENST00000462352 TXNRD1Q16881 649 aa15.46■□□□□ 0.07
CPNE1-221ENST00000462352 CCDC27Q2M243 656 aa15.46■□□□□ 0.07
CPNE1-221ENST00000462352 SALL2Q9Y467 1007 aaPredicted RBP15.46■□□□□ 0.07
CPNE1-221ENST00000462352 PAPPAQ13219 1627 aa15.46■□□□□ 0.06
CPNE1-221ENST00000462352 LY75O60449 1722 aa15.46■□□□□ 0.06
CPNE1-221ENST00000462352 ZNF790Q6PG37 636 aa15.44■□□□□ 0.06
CPNE1-221ENST00000462352 WWC1Q8IX03 1113 aa15.44■□□□□ 0.06
CPNE1-221ENST00000462352 TTC5Q8N0Z6 440 aa15.44■□□□□ 0.06
CPNE1-221ENST00000462352 RBM42Q9BTD8 480 aaKnown RBP15.44■□□□□ 0.06
CPNE1-221ENST00000462352 CCNL1Q9UK58 526 aaPredicted RBP15.44■□□□□ 0.06
CPNE1-221ENST00000462352 RREB1Q92766 1687 aa15.44■□□□□ 0.06
CPNE1-221ENST00000462352 LOC102724428A0A0B4J2F2 783 aa15.43■□□□□ 0.06
CPNE1-221ENST00000462352 KCNQ3O43525 872 aa15.43■□□□□ 0.06
CPNE1-221ENST00000462352 PTCD1O75127 700 aaKnown RBP15.43■□□□□ 0.06
CPNE1-221ENST00000462352 SIK1P57059 783 aa15.43■□□□□ 0.06
CPNE1-221ENST00000462352 SLC27A3Q5K4L6 730 aa15.43■□□□□ 0.06
CPNE1-221ENST00000462352 NGEFQ8N5V2 710 aa15.43■□□□□ 0.06
CPNE1-221ENST00000462352 LRRC4BQ9NT99 713 aa15.43■□□□□ 0.06
CPNE1-221ENST00000462352 MIS18AQ9NYP9 233 aa15.43■□□□□ 0.06
CPNE1-221ENST00000462352 KCPQ6ZWJ8 1503 aa15.43■□□□□ 0.06
CPNE1-221ENST00000462352 KCNQ4P56696 695 aa15.42■□□□□ 0.06
CPNE1-221ENST00000462352 CALD1Q05682 793 aaKnown RBP15.42■□□□□ 0.06
CPNE1-221ENST00000462352 SLC4A9Q96Q91 983 aa15.42■□□□□ 0.06
CPNE1-221ENST00000462352 NUP188Q5SRE5 1749 aa15.41■□□□□ 0.06
CPNE1-221ENST00000462352 ATP6V1AP38606 617 aa15.41■□□□□ 0.06
CPNE1-221ENST00000462352 ZNF496Q96IT1 587 aaPredicted RBP15.41■□□□□ 0.06
CPNE1-221ENST00000462352 BABAM1Q9NWV8 329 aa15.41■□□□□ 0.06
CPNE1-221ENST00000462352 TSPYL4Q9UJ04 414 aa15.41■□□□□ 0.06
CPNE1-221ENST00000462352 LAS1LQ9Y4W2 734 aaKnown RBP15.41■□□□□ 0.06
CPNE1-221ENST00000462352 UBR2Q8IWV8 1755 aa15.41■□□□□ 0.06
CPNE1-221ENST00000462352 KDM3BQ7LBC6 1761 aa15.4■□□□□ 0.06
CPNE1-221ENST00000462352 CHL1O00533 1208 aa15.4■□□□□ 0.06
CPNE1-221ENST00000462352 CFAP44Q96MT7 982 aa15.4■□□□□ 0.06
CPNE1-221ENST00000462352 ZNF831Q5JPB2 1677 aa15.39■□□□□ 0.05
CPNE1-221ENST00000462352 ZNF853P0CG23 659 aa15.39■□□□□ 0.05
CPNE1-221ENST00000462352 GNAI1P63096 354 aa15.39■□□□□ 0.05
CPNE1-221ENST00000462352 ITPK1Q13572 414 aa15.39■□□□□ 0.05
CPNE1-221ENST00000462352 FMNL2Q96PY5 1086 aa15.39■□□□□ 0.05
CPNE1-221ENST00000462352 IFT57Q9NWB7 429 aa15.39■□□□□ 0.05
CPNE1-221ENST00000462352 ZNF521Q96K83 1311 aa15.39■□□□□ 0.05
CPNE1-221ENST00000462352 HEG1Q9ULI3 1381 aa15.38■□□□□ 0.05
CPNE1-221ENST00000462352 WDR63Q8IWG1 891 aa15.38■□□□□ 0.05
CPNE1-221ENST00000462352 VSIG10Q8N0Z9 540 aa15.38■□□□□ 0.05
CPNE1-221ENST00000462352 IL16Q14005 1332 aa15.38■□□□□ 0.05
CPNE1-221ENST00000462352 CICQ96RK0 1608 aaPredicted RBP15.37■□□□□ 0.05
CPNE1-221ENST00000462352 EIF4A1P60842 406 aaKnown RBP15.37■□□□□ 0.05
CPNE1-221ENST00000462352 DNAJC10Q8IXB1 793 aa15.37■□□□□ 0.05
CPNE1-221ENST00000462352 LINC00116Q8NCU8 138 aa15.37■□□□□ 0.05
CPNE1-221ENST00000462352 MBIPQ9NS73 344 aa15.37■□□□□ 0.05
CPNE1-221ENST00000462352 C5P01031 1676 aa15.37■□□□□ 0.05
CPNE1-221ENST00000462352 TJP1Q07157 1748 aa15.37■□□□□ 0.05
CPNE1-221ENST00000462352 TAF1LQ8IZX4 1826 aa15.36■□□□□ 0.05
CPNE1-221ENST00000462352 HMGB2P26583 209 aaKnown RBP15.36■□□□□ 0.05
CPNE1-221ENST00000462352 HNRNPUQ00839 825 aaKnown RBP eCLIP15.36■□□□□ 0.05
CPNE1-221ENST00000462352 NBPF14Q5TI25 921 aa15.36■□□□□ 0.05
CPNE1-221ENST00000462352 ANO8Q9HCE9 1232 aaPredicted RBP15.36■□□□□ 0.05
CPNE1-221ENST00000462352 ZNF827Q17R98 1081 aa15.35■□□□□ 0.05
CPNE1-221ENST00000462352 AKT1S1Q96B36 256 aa15.35■□□□□ 0.05
CPNE1-221ENST00000462352 COL5A3P25940 1745 aaPredicted RBP15.34■□□□□ 0.05
CPNE1-221ENST00000462352 PRAMEF22A3QJZ6 481 aa15.34■□□□□ 0.05
CPNE1-221ENST00000462352 SNRPA1P09661 255 aaKnown RBP15.34■□□□□ 0.05
CPNE1-221ENST00000462352 SLC15A2Q16348 729 aa15.34■□□□□ 0.05
CPNE1-221ENST00000462352 TSR2Q969E8 191 aaKnown RBP15.34■□□□□ 0.05
CPNE1-221ENST00000462352 TEX13AQ9BXU3 409 aaPredicted RBP15.34■□□□□ 0.05
CPNE1-221ENST00000462352 SPINK5Q9NQ38 1064 aaPredicted RBP15.34■□□□□ 0.05
CPNE1-221ENST00000462352 STK32BQ9NY57 414 aa15.34■□□□□ 0.05
CPNE1-221ENST00000462352 C4BP0C0L5 1744 aa15.34■□□□□ 0.05
CPNE1-221ENST00000462352 GIGYF1O75420 1035 aaPredicted RBP15.33■□□□□ 0.04
CPNE1-221ENST00000462352 CYP19A1P11511 503 aaPredicted RBP15.33■□□□□ 0.04
CPNE1-221ENST00000462352 STARD3NLO95772 234 aa15.32■□□□□ 0.04
CPNE1-221ENST00000462352 CRKLP46109 303 aaKnown RBP15.32■□□□□ 0.04
CPNE1-221ENST00000462352 GOLGA2Q08379 1002 aa15.32■□□□□ 0.04
CPNE1-221ENST00000462352 KRT24Q2M2I5 525 aa15.32■□□□□ 0.04
CPNE1-221ENST00000462352 AK7Q96M32 723 aa15.32■□□□□ 0.04
CPNE1-221ENST00000462352 USP16Q9Y5T5 823 aa15.32■□□□□ 0.04
CPNE1-221ENST00000462352 CNTNAP4Q9C0A0 1308 aa15.32■□□□□ 0.04
CPNE1-221ENST00000462352 FANCIQ9NVI1 1328 aa15.32■□□□□ 0.04
CPNE1-221ENST00000462352 RC3H1Q5TC82 1133 aaKnown RBP15.31■□□□□ 0.04
CPNE1-221ENST00000462352 MYH16Q9H6N6 1097 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms