RNA–Protein interactions for RNA: ENST00000462297.1

AUP1-203, Transcript of AUP1, lipid droplet regulating VLDL assembly factor, humanhuman

TSL 3

Gene AUP1, Length 457 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AUP1-203ENST00000462297 ATG3Q9NT62 314 aa13.13□□□□□ -0.31
AUP1-203ENST00000462297 LRRC4BQ9NT99 713 aa13.13□□□□□ -0.31
AUP1-203ENST00000462297 MRC1P22897 1456 aa13.12□□□□□ -0.31
AUP1-203ENST00000462297 SENP3-EIF4A1A0A087X0R7 540 aa13.12□□□□□ -0.31
AUP1-203ENST00000462297 NEUROD2Q15784 382 aa13.12□□□□□ -0.31
AUP1-203ENST00000462297 RTF1Q92541 710 aaKnown RBP13.12□□□□□ -0.31
AUP1-203ENST00000462297 THUMPD2Q9BTF0 503 aaKnown RBP13.12□□□□□ -0.31
AUP1-203ENST00000462297 TMPOP42166 694 aaKnown RBP13.11□□□□□ -0.31
AUP1-203ENST00000462297 TEFQ10587 303 aa13.11□□□□□ -0.31
AUP1-203ENST00000462297 SLC39A6Q13433 755 aa13.11□□□□□ -0.31
AUP1-203ENST00000462297 NBPF14Q5TI25 921 aa13.11□□□□□ -0.31
AUP1-203ENST00000462297 SMARCC1Q92922 1105 aaPredicted RBP13.11□□□□□ -0.31
AUP1-203ENST00000462297 ANO8Q9HCE9 1232 aaPredicted RBP13.11□□□□□ -0.31
AUP1-203ENST00000462297 CCNL1Q9UK58 526 aaPredicted RBP13.11□□□□□ -0.31
AUP1-203ENST00000462297 CEMIPQ8WUJ3 1361 aa13.1□□□□□ -0.31
AUP1-203ENST00000462297 RIPK4P57078 832 aa13.1□□□□□ -0.31
AUP1-203ENST00000462297 FAM9BQ8IZU0 186 aa13.1□□□□□ -0.31
AUP1-203ENST00000462297 MIER1Q8N108 512 aa13.1□□□□□ -0.31
AUP1-203ENST00000462297 VIRMAQ69YN4 1812 aaKnown RBP13.1□□□□□ -0.31
AUP1-203ENST00000462297 LY75O60449 1722 aa13.1□□□□□ -0.31
AUP1-203ENST00000462297 LOC102724428A0A0B4J2F2 783 aa13.09□□□□□ -0.31
AUP1-203ENST00000462297 PSDA5PKW4 1024 aaPredicted RBP13.09□□□□□ -0.31
AUP1-203ENST00000462297 APAF1O14727 1248 aa13.09□□□□□ -0.31
AUP1-203ENST00000462297 HTATSF1O43719 755 aaKnown RBP13.09□□□□□ -0.31
AUP1-203ENST00000462297 PTCD1O75127 700 aaKnown RBP13.09□□□□□ -0.31
AUP1-203ENST00000462297 SIK1P57059 783 aa13.09□□□□□ -0.31
AUP1-203ENST00000462297 SLC27A3Q5K4L6 730 aa13.09□□□□□ -0.31
AUP1-203ENST00000462297 RBM42Q9BTD8 480 aaKnown RBP13.09□□□□□ -0.31
AUP1-203ENST00000462297 DLG5Q8TDM6 1919 aa13.09□□□□□ -0.31
AUP1-203ENST00000462297 PAPPAQ13219 1627 aa13.09□□□□□ -0.31
AUP1-203ENST00000462297 R3HDM1Q15032 1099 aaKnown RBP13.08□□□□□ -0.32
AUP1-203ENST00000462297 ITPK1Q13572 414 aa13.07□□□□□ -0.32
AUP1-203ENST00000462297 ZNF827Q17R98 1081 aa13.07□□□□□ -0.32
AUP1-203ENST00000462297 SLC4A9Q96Q91 983 aa13.07□□□□□ -0.32
AUP1-203ENST00000462297 KCNQ3O43525 872 aa13.06□□□□□ -0.32
AUP1-203ENST00000462297 HMGB2P26583 209 aaKnown RBP13.06□□□□□ -0.32
AUP1-203ENST00000462297 ATP6V1AP38606 617 aa13.06□□□□□ -0.32
AUP1-203ENST00000462297 STK32BQ9NY57 414 aa13.06□□□□□ -0.32
AUP1-203ENST00000462297 MIS18AQ9NYP9 233 aa13.06□□□□□ -0.32
AUP1-203ENST00000462297 TRIM35Q9UPQ4 493 aa13.06□□□□□ -0.32
AUP1-203ENST00000462297 SIPA1L3O60292 1781 aaPredicted RBP13.06□□□□□ -0.32
AUP1-203ENST00000462297 KCPQ6ZWJ8 1503 aa13.05□□□□□ -0.32
AUP1-203ENST00000462297 BTBD11A6QL63 1104 aa13.05□□□□□ -0.32
AUP1-203ENST00000462297 CCER2I3L3R5 266 aa13.05□□□□□ -0.32
AUP1-203ENST00000462297 LMOD3Q0VAK6 560 aa13.05□□□□□ -0.32
AUP1-203ENST00000462297 LINC00116Q8NCU8 138 aa13.05□□□□□ -0.32
AUP1-203ENST00000462297 LRP5O75197 1615 aa13.05□□□□□ -0.32
AUP1-203ENST00000462297 TAF7Q15545 349 aaPredicted RBP13.04□□□□□ -0.32
AUP1-203ENST00000462297 SLC15A2Q16348 729 aa13.04□□□□□ -0.32
AUP1-203ENST00000462297 ZNF790Q6PG37 636 aa13.04□□□□□ -0.32
AUP1-203ENST00000462297 TTC5Q8N0Z6 440 aa13.04□□□□□ -0.32
AUP1-203ENST00000462297 AKT1S1Q96B36 256 aa13.04□□□□□ -0.32
AUP1-203ENST00000462297 ZNF496Q96IT1 587 aaPredicted RBP13.04□□□□□ -0.32
AUP1-203ENST00000462297 C5P01031 1676 aa13.04□□□□□ -0.32
AUP1-203ENST00000462297 SMIM5Q71RC9 77 aa13.03□□□□□ -0.32
AUP1-203ENST00000462297 PDGFDQ9GZP0 370 aaPredicted RBP13.03□□□□□ -0.32
AUP1-203ENST00000462297 SALL2Q9Y467 1007 aaPredicted RBP13.03□□□□□ -0.32
AUP1-203ENST00000462297 DNAJC10Q8IXB1 793 aa13.02□□□□□ -0.33
AUP1-203ENST00000462297 TFCP2L1Q9NZI6 479 aa13.02□□□□□ -0.33
AUP1-203ENST00000462297 C4BP0C0L5 1744 aa13.02□□□□□ -0.33
AUP1-203ENST00000462297 TAF1LQ8IZX4 1826 aa13.02□□□□□ -0.33
AUP1-203ENST00000462297 AMIGO3Q86WK7 504 aa13.01□□□□□ -0.33
AUP1-203ENST00000462297 AK7Q96M32 723 aa13.01□□□□□ -0.33
AUP1-203ENST00000462297 LAS1LQ9Y4W2 734 aaKnown RBP13.01□□□□□ -0.33
AUP1-203ENST00000462297 TJP1Q07157 1748 aa13.01□□□□□ -0.33
AUP1-203ENST00000462297 UBR2Q8IWV8 1755 aa13.01□□□□□ -0.33
AUP1-203ENST00000462297 CASZ1Q86V15 1759 aa13□□□□□ -0.33
AUP1-203ENST00000462297 HEG1Q9ULI3 1381 aa13□□□□□ -0.33
AUP1-203ENST00000462297 FMNL2Q96PY5 1086 aa13□□□□□ -0.33
AUP1-203ENST00000462297 TSPYL4Q9UJ04 414 aa13□□□□□ -0.33
AUP1-203ENST00000462297 ZNF831Q5JPB2 1677 aa12.99□□□□□ -0.33
AUP1-203ENST00000462297 PNPLA7Q6ZV29 1317 aa12.99□□□□□ -0.33
AUP1-203ENST00000462297 PRAMEF22A3QJZ6 481 aa12.99□□□□□ -0.33
AUP1-203ENST00000462297 GNPATO15228 680 aa12.99□□□□□ -0.33
AUP1-203ENST00000462297 PHF14O94880 888 aa12.99□□□□□ -0.33
AUP1-203ENST00000462297 CRKLP46109 303 aaKnown RBP12.99□□□□□ -0.33
AUP1-203ENST00000462297 TUBGCP6Q96RT7 1819 aa12.99□□□□□ -0.33
AUP1-203ENST00000462297 QSER1Q2KHR3 1735 aa12.99□□□□□ -0.33
AUP1-203ENST00000462297 MSH5O43196 834 aa12.98□□□□□ -0.33
AUP1-203ENST00000462297 CYP19A1P11511 503 aaPredicted RBP12.98□□□□□ -0.33
AUP1-203ENST00000462297 VSIG10Q8N0Z9 540 aa12.98□□□□□ -0.33
AUP1-203ENST00000462297 KDM3BQ7LBC6 1761 aa12.98□□□□□ -0.33
AUP1-203ENST00000462297 COL5A3P25940 1745 aaPredicted RBP12.98□□□□□ -0.33
AUP1-203ENST00000462297 CNTNAP4Q9C0A0 1308 aa12.97□□□□□ -0.33
AUP1-203ENST00000462297 EIF4A1P60842 406 aaKnown RBP12.97□□□□□ -0.33
AUP1-203ENST00000462297 INTS5Q6P9B9 1019 aaKnown RBP12.97□□□□□ -0.33
AUP1-203ENST00000462297 COL23A1Q86Y22 540 aaPredicted RBP12.97□□□□□ -0.33
AUP1-203ENST00000462297 WWC1Q8IX03 1113 aa12.97□□□□□ -0.33
AUP1-203ENST00000462297 CICQ96RK0 1608 aaPredicted RBP12.97□□□□□ -0.33
AUP1-203ENST00000462297 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.96□□□□□ -0.33
AUP1-203ENST00000462297 CHL1O00533 1208 aa12.96□□□□□ -0.33
AUP1-203ENST00000462297 ZBTB7AO95365 584 aa12.96□□□□□ -0.33
AUP1-203ENST00000462297 CCDC27Q2M243 656 aa12.96□□□□□ -0.33
AUP1-203ENST00000462297 RC3H1Q5TC82 1133 aaKnown RBP12.96□□□□□ -0.33
AUP1-203ENST00000462297 CCDC87Q9NVE4 849 aa12.96□□□□□ -0.33
AUP1-203ENST00000462297 MYH14Q7Z406 1995 aaKnown RBP12.95□□□□□ -0.34
AUP1-203ENST00000462297 STARD3NLO95772 234 aa12.95□□□□□ -0.34
AUP1-203ENST00000462297 SNRPA1P09661 255 aaKnown RBP12.95□□□□□ -0.34
AUP1-203ENST00000462297 ZNF853P0CG23 659 aa12.95□□□□□ -0.34
AUP1-203ENST00000462297 CALD1Q05682 793 aaKnown RBP12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms