RNA–Protein interactions for RNA: ENST00000462247.1

ERCC6-204, Transcript of ERCC excision repair 6, chromatin remodeling factor, humanhuman

TSL 3

Gene ERCC6, Length 660 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC6-204ENST00000462247 PKD1L3Q7Z443 1732 aa16.53■□□□□ 0.24
ERCC6-204ENST00000462247 TAF1LQ8IZX4 1826 aa16.52■□□□□ 0.24
ERCC6-204ENST00000462247 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.52■□□□□ 0.24
ERCC6-204ENST00000462247 AMIGO3Q86WK7 504 aa16.52■□□□□ 0.24
ERCC6-204ENST00000462247 KNSTRNQ9Y448 316 aa16.52■□□□□ 0.24
ERCC6-204ENST00000462247 MAP2P11137 1827 aaKnown RBP16.51■□□□□ 0.23
ERCC6-204ENST00000462247 KIF13BQ9NQT8 1826 aa16.5■□□□□ 0.23
ERCC6-204ENST00000462247 ABHD8Q96I13 439 aa16.5■□□□□ 0.23
ERCC6-204ENST00000462247 RNF181Q9P0P0 153 aa16.5■□□□□ 0.23
ERCC6-204ENST00000462247 KIAA1551Q9HCM1 1747 aa16.5■□□□□ 0.23
ERCC6-204ENST00000462247 C4BP0C0L5 1744 aa16.49■□□□□ 0.23
ERCC6-204ENST00000462247 COG3Q96JB2 828 aa16.49■□□□□ 0.23
ERCC6-204ENST00000462247 NPC1L1Q9UHC9 1359 aa16.49■□□□□ 0.23
ERCC6-204ENST00000462247 UBR3Q6ZT12 1888 aa16.48■□□□□ 0.23
ERCC6-204ENST00000462247 TOGARAM1Q9Y4F4 1720 aa16.48■□□□□ 0.23
ERCC6-204ENST00000462247 MMP10P09238 476 aa16.48■□□□□ 0.23
ERCC6-204ENST00000462247 TNNT2P45379 298 aaPredicted RBP16.48■□□□□ 0.23
ERCC6-204ENST00000462247 CTCFP49711 727 aaPredicted RBP16.48■□□□□ 0.23
ERCC6-204ENST00000462247 ZCRB1Q8TBF4 217 aaKnown RBP16.48■□□□□ 0.23
ERCC6-204ENST00000462247 DPEP1P16444 411 aa16.47■□□□□ 0.23
ERCC6-204ENST00000462247 SSFA2P28290 1259 aa16.47■□□□□ 0.23
ERCC6-204ENST00000462247 RRS1Q15050 365 aaKnown RBP16.47■□□□□ 0.23
ERCC6-204ENST00000462247 AIDAQ96BJ3 306 aa16.47■□□□□ 0.23
ERCC6-204ENST00000462247 MKRN1Q9UHC7 482 aaKnown RBP16.47■□□□□ 0.23
ERCC6-204ENST00000462247 PALLDQ8WX93 1383 aa16.47■□□□□ 0.23
ERCC6-204ENST00000462247 VEGFAP15692 232 aaPredicted RBP16.45■□□□□ 0.22
ERCC6-204ENST00000462247 LTV1Q96GA3 475 aaPredicted RBP16.45■□□□□ 0.22
ERCC6-204ENST00000462247 MAP3K19Q56UN5 1328 aa16.45■□□□□ 0.22
ERCC6-204ENST00000462247 EMILIN1Q9Y6C2 1016 aa16.44■□□□□ 0.22
ERCC6-204ENST00000462247 ARFGEF1Q9Y6D6 1849 aa16.44■□□□□ 0.22
ERCC6-204ENST00000462247 BRCA1P38398 1863 aaKnown RBP16.44■□□□□ 0.22
ERCC6-204ENST00000462247 RGPD2P0DJD1 1756 aa16.43■□□□□ 0.22
ERCC6-204ENST00000462247 RGS19P49795 217 aa16.43■□□□□ 0.22
ERCC6-204ENST00000462247 MORC1Q86VD1 984 aa16.43■□□□□ 0.22
ERCC6-204ENST00000462247 LBX1P52954 281 aa16.42■□□□□ 0.22
ERCC6-204ENST00000462247 MPRIPQ6WCQ1 1025 aa16.42■□□□□ 0.22
ERCC6-204ENST00000462247 CREBZFQ9NS37 354 aa16.42■□□□□ 0.22
ERCC6-204ENST00000462247 FAM208AQ9UK61 1670 aaKnown RBP16.42■□□□□ 0.22
ERCC6-204ENST00000462247 SMG6Q86US8 1419 aaKnown RBP16.42■□□□□ 0.22
ERCC6-204ENST00000462247 SBF1O95248 1867 aa16.42■□□□□ 0.22
ERCC6-204ENST00000462247 CCDC85CA6NKD9 419 aa16.41■□□□□ 0.22
ERCC6-204ENST00000462247 DCAF5Q96JK2 942 aa16.41■□□□□ 0.22
ERCC6-204ENST00000462247 CCDC87Q9NVE4 849 aa16.41■□□□□ 0.22
ERCC6-204ENST00000462247 PIM2Q9P1W9 311 aa16.41■□□□□ 0.22
ERCC6-204ENST00000462247 POLKQ9UBT6 870 aa16.41■□□□□ 0.22
ERCC6-204ENST00000462247 KCNA3P22001 575 aa16.4■□□□□ 0.22
ERCC6-204ENST00000462247 IP6K1Q92551 441 aa16.4■□□□□ 0.22
ERCC6-204ENST00000462247 SMARCC1Q92922 1105 aaPredicted RBP16.4■□□□□ 0.22
ERCC6-204ENST00000462247 DALRD3Q5D0E6 543 aaKnown RBP16.39■□□□□ 0.21
ERCC6-204ENST00000462247 ZC3H4Q9UPT8 1303 aaKnown RBP16.39■□□□□ 0.21
ERCC6-204ENST00000462247 COL3A1P02461 1466 aaPredicted RBP16.38■□□□□ 0.21
ERCC6-204ENST00000462247 GLTPD2A6NH11 291 aa16.38■□□□□ 0.21
ERCC6-204ENST00000462247 GNPATO15228 680 aa16.38■□□□□ 0.21
ERCC6-204ENST00000462247 NLGN1Q8N2Q7 840 aa16.38■□□□□ 0.21
ERCC6-204ENST00000462247 MEGF6O75095 1541 aa16.38■□□□□ 0.21
ERCC6-204ENST00000462247 PDE4DIPQ5VU43 2346 aa16.37■□□□□ 0.21
ERCC6-204ENST00000462247 PPP2R1AP30153 589 aa16.37■□□□□ 0.21
ERCC6-204ENST00000462247 HOXC9P31274 260 aa16.37■□□□□ 0.21
ERCC6-204ENST00000462247 LINC00116Q8NCU8 138 aa16.37■□□□□ 0.21
ERCC6-204ENST00000462247 PRKRIP1Q9H875 184 aaPredicted RBP16.37■□□□□ 0.21
ERCC6-204ENST00000462247 CNTNAP1P78357 1384 aa16.37■□□□□ 0.21
ERCC6-204ENST00000462247 HSP90AB2PQ58FF8 381 aa16.36■□□□□ 0.21
ERCC6-204ENST00000462247 PPM1GO15355 546 aaPredicted RBP16.35■□□□□ 0.21
ERCC6-204ENST00000462247 TNRC18O15417 2968 aaPredicted RBP16.35■□□□□ 0.21
ERCC6-204ENST00000462247 WBP1LQ9NX94 342 aa16.35■□□□□ 0.21
ERCC6-204ENST00000462247 RTL1A6NKG5 1358 aa16.35■□□□□ 0.21
ERCC6-204ENST00000462247 MTHFSP49914 203 aa16.34■□□□□ 0.21
ERCC6-204ENST00000462247 PARP3Q9Y6F1 533 aa16.34■□□□□ 0.21
ERCC6-204ENST00000462247 FLT4P35916 1363 aa16.34■□□□□ 0.21
ERCC6-204ENST00000462247 C4AP0C0L4 1744 aa16.33■□□□□ 0.21
ERCC6-204ENST00000462247 AMPHP49418 695 aa16.33■□□□□ 0.2
ERCC6-204ENST00000462247 CCDC184Q52MB2 194 aa16.33■□□□□ 0.2
ERCC6-204ENST00000462247 LOC102724428A0A0B4J2F2 783 aa16.32■□□□□ 0.2
ERCC6-204ENST00000462247 HSPA8P11142 646 aaKnown RBP16.32■□□□□ 0.2
ERCC6-204ENST00000462247 VEGFBP49765 207 aa16.32■□□□□ 0.2
ERCC6-204ENST00000462247 SIK1P57059 783 aa16.32■□□□□ 0.2
ERCC6-204ENST00000462247 TRAPPC3LQ5T215 181 aa16.32■□□□□ 0.2
ERCC6-204ENST00000462247 INSRP06213 1382 aa16.31■□□□□ 0.2
ERCC6-204ENST00000462247 LMNB1P20700 586 aa16.31■□□□□ 0.2
ERCC6-204ENST00000462247 RASSF7Q02833 373 aa16.31■□□□□ 0.2
ERCC6-204ENST00000462247 CHADLQ6NUI6 762 aa16.31■□□□□ 0.2
ERCC6-204ENST00000462247 RAPGEF4Q8WZA2 1011 aa16.31■□□□□ 0.2
ERCC6-204ENST00000462247 ITGB4P16144 1822 aa16.31■□□□□ 0.2
ERCC6-204ENST00000462247 PCDH11XQ9BZA7 1347 aa16.3■□□□□ 0.2
ERCC6-204ENST00000462247 PCDH11YQ9BZA8 1340 aa16.3■□□□□ 0.2
ERCC6-204ENST00000462247 POTECB2RU33 542 aa16.3■□□□□ 0.2
ERCC6-204ENST00000462247 RALBP1Q15311 655 aa16.3■□□□□ 0.2
ERCC6-204ENST00000462247 DIEXFQ68CQ4 756 aaKnown RBP16.3■□□□□ 0.2
ERCC6-204ENST00000462247 CFAP44Q96MT7 982 aa16.3■□□□□ 0.2
ERCC6-204ENST00000462247 KDM6AO15550 1401 aaPredicted RBP16.29■□□□□ 0.2
ERCC6-204ENST00000462247 KIF24Q5T7B8 1368 aa16.29■□□□□ 0.2
ERCC6-204ENST00000462247 MYBBP1AQ9BQG0 1328 aaKnown RBP16.29■□□□□ 0.2
ERCC6-204ENST00000462247 ITPK1Q13572 414 aa16.29■□□□□ 0.2
ERCC6-204ENST00000462247 EIF4A2Q14240 407 aaKnown RBP16.29■□□□□ 0.2
ERCC6-204ENST00000462247 PIGBQ92521 554 aa16.29■□□□□ 0.2
ERCC6-204ENST00000462247 TATP17735 454 aaPredicted RBP16.28■□□□□ 0.2
ERCC6-204ENST00000462247 ATP6V1AP38606 617 aa16.28■□□□□ 0.2
ERCC6-204ENST00000462247 RTCBQ9Y3I0 505 aaKnown RBP16.28■□□□□ 0.2
ERCC6-204ENST00000462247 VIRMAQ69YN4 1812 aaKnown RBP16.27■□□□□ 0.2
ERCC6-204ENST00000462247 GYS1P13807 737 aa16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms