RNA–Protein interactions for RNA: ENST00000462202.2

TRIM8-202, Transcript of tripartite motif containing 8, humanhuman

TSL 5

Gene TRIM8, Length 891 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM8-202ENST00000462202 RNMTO43148 476 aaKnown RBP28.86■■■□□ 2.21
TRIM8-202ENST00000462202 ATP6V1AP38606 617 aa28.86■■■□□ 2.21
TRIM8-202ENST00000462202 PHACTR3Q96KR7 559 aa28.85■■■□□ 2.21
TRIM8-202ENST00000462202 FCHSD2O94868 740 aa28.84■■■□□ 2.21
TRIM8-202ENST00000462202 AK7Q96M32 723 aa28.84■■■□□ 2.21
TRIM8-202ENST00000462202 MYBBP1AQ9BQG0 1328 aaKnown RBP28.84■■■□□ 2.21
TRIM8-202ENST00000462202 GNAT3A8MTJ3 354 aa28.83■■■□□ 2.21
TRIM8-202ENST00000462202 NEFMP07197 916 aa28.83■■■□□ 2.21
TRIM8-202ENST00000462202 SLC52A2Q9HAB3 445 aa28.83■■■□□ 2.21
TRIM8-202ENST00000462202 MAP3K5Q99683 1374 aa28.83■■■□□ 2.21
TRIM8-202ENST00000462202 PTCD1O75127 700 aaKnown RBP28.82■■■□□ 2.2
TRIM8-202ENST00000462202 PNPLA7Q6ZV29 1317 aa28.82■■■□□ 2.2
TRIM8-202ENST00000462202 CASZ1Q86V15 1759 aa28.82■■■□□ 2.2
TRIM8-202ENST00000462202 C5P01031 1676 aa28.8■■■□□ 2.2
TRIM8-202ENST00000462202 ITPK1Q13572 414 aa28.8■■■□□ 2.2
TRIM8-202ENST00000462202 LINC00116Q8NCU8 138 aa28.8■■■□□ 2.2
TRIM8-202ENST00000462202 MTFR1LQ9H019 292 aa28.8■■■□□ 2.2
TRIM8-202ENST00000462202 TEFQ10587 303 aa28.78■■■□□ 2.2
TRIM8-202ENST00000462202 SCN11AQ9UI33 1791 aa28.78■■■□□ 2.2
TRIM8-202ENST00000462202 PHF14O94880 888 aa28.77■■■□□ 2.2
TRIM8-202ENST00000462202 RTF1Q92541 710 aaKnown RBP28.76■■■□□ 2.19
TRIM8-202ENST00000462202 PRKRIP1Q9H875 184 aaPredicted RBP28.76■■■□□ 2.19
TRIM8-202ENST00000462202 SLC39A6Q13433 755 aa28.75■■■□□ 2.19
TRIM8-202ENST00000462202 COL23A1Q86Y22 540 aaPredicted RBP28.75■■■□□ 2.19
TRIM8-202ENST00000462202 C4BP0C0L5 1744 aa28.74■■■□□ 2.19
TRIM8-202ENST00000462202 GNPATO15228 680 aa28.74■■■□□ 2.19
TRIM8-202ENST00000462202 IL17REQ8NFR9 667 aa28.74■■■□□ 2.19
TRIM8-202ENST00000462202 SLC4A9Q96Q91 983 aa28.74■■■□□ 2.19
TRIM8-202ENST00000462202 MAPK8IP3Q9UPT6 1336 aa28.73■■■□□ 2.19
TRIM8-202ENST00000462202 FLAD1Q8NFF5 587 aa28.73■■■□□ 2.19
TRIM8-202ENST00000462202 SLC16A10Q8TF71 515 aa28.73■■■□□ 2.19
TRIM8-202ENST00000462202 PNNQ9H307 717 aaKnown RBP28.73■■■□□ 2.19
TRIM8-202ENST00000462202 SMIM5Q71RC9 77 aa28.72■■■□□ 2.19
TRIM8-202ENST00000462202 MRC1P22897 1456 aa28.72■■■□□ 2.19
TRIM8-202ENST00000462202 TAF1LQ8IZX4 1826 aa28.71■■■□□ 2.19
TRIM8-202ENST00000462202 PTGER2P43116 358 aa28.71■■■□□ 2.19
TRIM8-202ENST00000462202 TTC5Q8N0Z6 440 aa28.71■■■□□ 2.19
TRIM8-202ENST00000462202 TUBGCP6Q96RT7 1819 aa28.71■■■□□ 2.19
TRIM8-202ENST00000462202 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP28.7■■■□□ 2.18
TRIM8-202ENST00000462202 WDR43Q15061 677 aaKnown RBP eCLIP28.7■■■□□ 2.18
TRIM8-202ENST00000462202 POLD1P28340 1107 aa28.69■■■□□ 2.18
TRIM8-202ENST00000462202 MSL1Q68DK7 614 aa28.69■■■□□ 2.18
TRIM8-202ENST00000462202 MCM10Q7L590 875 aa28.69■■■□□ 2.18
TRIM8-202ENST00000462202 QSER1Q2KHR3 1735 aa28.69■■■□□ 2.18
TRIM8-202ENST00000462202 DCTN1Q14203 1278 aa28.67■■■□□ 2.18
TRIM8-202ENST00000462202 AMIGO3Q86WK7 504 aa28.67■■■□□ 2.18
TRIM8-202ENST00000462202 SSFA2P28290 1259 aa28.66■■■□□ 2.18
TRIM8-202ENST00000462202 RTCBQ9Y3I0 505 aaKnown RBP28.66■■■□□ 2.18
TRIM8-202ENST00000462202 ADAMTS7Q9UKP4 1686 aa28.66■■■□□ 2.18
TRIM8-202ENST00000462202 VIRMAQ69YN4 1812 aaKnown RBP28.65■■■□□ 2.18
TRIM8-202ENST00000462202 KLHL34Q8N239 644 aa28.65■■■□□ 2.18
TRIM8-202ENST00000462202 ARXQ96QS3 562 aa28.65■■■□□ 2.18
TRIM8-202ENST00000462202 PLEKHF1Q96S99 279 aa28.65■■■□□ 2.18
TRIM8-202ENST00000462202 DNAJC10Q8IXB1 793 aa28.64■■■□□ 2.18
TRIM8-202ENST00000462202 BTBD11A6QL63 1104 aa28.63■■■□□ 2.17
TRIM8-202ENST00000462202 NFE2L2Q16236 605 aa28.63■■■□□ 2.17
TRIM8-202ENST00000462202 CNTNAP4Q9C0A0 1308 aa28.63■■■□□ 2.17
TRIM8-202ENST00000462202 CEMIPQ8WUJ3 1361 aa28.62■■■□□ 2.17
TRIM8-202ENST00000462202 HTATSF1O43719 755 aaKnown RBP28.62■■■□□ 2.17
TRIM8-202ENST00000462202 CRKLP46109 303 aaKnown RBP28.62■■■□□ 2.17
TRIM8-202ENST00000462202 RC3H1Q5TC82 1133 aaKnown RBP28.62■■■□□ 2.17
TRIM8-202ENST00000462202 SGIP1Q9BQI5 828 aa28.62■■■□□ 2.17
TRIM8-202ENST00000462202 TRAPPC3LQ5T215 181 aa28.61■■■□□ 2.17
TRIM8-202ENST00000462202 ZNF790Q6PG37 636 aa28.61■■■□□ 2.17
TRIM8-202ENST00000462202 CCDC146Q8IYE0 955 aa28.61■■■□□ 2.17
TRIM8-202ENST00000462202 ZNF831Q5JPB2 1677 aa28.59■■■□□ 2.17
TRIM8-202ENST00000462202 ANP32CO43423 234 aa28.59■■■□□ 2.17
TRIM8-202ENST00000462202 FHDC1Q9C0D6 1143 aaPredicted RBP28.59■■■□□ 2.17
TRIM8-202ENST00000462202 KCPQ6ZWJ8 1503 aa28.59■■■□□ 2.17
TRIM8-202ENST00000462202 UBR3Q6ZT12 1888 aa28.58■■■□□ 2.17
TRIM8-202ENST00000462202 RPS6KA4O75676 772 aa28.58■■■□□ 2.17
TRIM8-202ENST00000462202 ZNF496Q96IT1 587 aaPredicted RBP28.58■■■□□ 2.17
TRIM8-202ENST00000462202 RFC4P35249 363 aa28.57■■■□□ 2.16
TRIM8-202ENST00000462202 KCNQ3O43525 872 aa28.56■■■□□ 2.16
TRIM8-202ENST00000462202 FMNL2Q96PY5 1086 aa28.56■■■□□ 2.16
TRIM8-202ENST00000462202 CCDC87Q9NVE4 849 aa28.56■■■□□ 2.16
TRIM8-202ENST00000462202 COL5A3P25940 1745 aaPredicted RBP28.55■■■□□ 2.16
TRIM8-202ENST00000462202 TJP1Q07157 1748 aa28.55■■■□□ 2.16
TRIM8-202ENST00000462202 VSIG10Q8N0Z9 540 aa28.55■■■□□ 2.16
TRIM8-202ENST00000462202 ARHGEF1Q92888 912 aaKnown RBP28.55■■■□□ 2.16
TRIM8-202ENST00000462202 THUMPD2Q9BTF0 503 aaKnown RBP28.55■■■□□ 2.16
TRIM8-202ENST00000462202 ADAMTS8Q9UP79 889 aa28.55■■■□□ 2.16
TRIM8-202ENST00000462202 CYP19A1P11511 503 aaPredicted RBP28.54■■■□□ 2.16
TRIM8-202ENST00000462202 ADRA2BP18089 450 aa28.54■■■□□ 2.16
TRIM8-202ENST00000462202 RIPK4P57078 832 aa28.54■■■□□ 2.16
TRIM8-202ENST00000462202 NEUROD2Q15784 382 aa28.54■■■□□ 2.16
TRIM8-202ENST00000462202 RRP7AQ9Y3A4 280 aaKnown RBP28.54■■■□□ 2.16
TRIM8-202ENST00000462202 HEG1Q9ULI3 1381 aa28.53■■■□□ 2.16
TRIM8-202ENST00000462202 STARD3NLO95772 234 aa28.53■■■□□ 2.16
TRIM8-202ENST00000462202 TAF7Q15545 349 aaPredicted RBP28.53■■■□□ 2.16
TRIM8-202ENST00000462202 INTS5Q6P9B9 1019 aaKnown RBP28.53■■■□□ 2.16
TRIM8-202ENST00000462202 DCAF8L1A6NGE4 600 aa28.52■■■□□ 2.16
TRIM8-202ENST00000462202 RUNDC1Q96C34 613 aa28.52■■■□□ 2.16
TRIM8-202ENST00000462202 SYT17Q9BSW7 474 aa28.52■■■□□ 2.16
TRIM8-202ENST00000462202 MIS18AQ9NYP9 233 aa28.52■■■□□ 2.16
TRIM8-202ENST00000462202 SIPA1L3O60292 1781 aaPredicted RBP28.51■■■□□ 2.15
TRIM8-202ENST00000462202 CANXP27824 592 aaKnown RBP28.5■■■□□ 2.15
TRIM8-202ENST00000462202 TMPOP42166 694 aaKnown RBP28.5■■■□□ 2.15
TRIM8-202ENST00000462202 TEX13AQ9BXU3 409 aaPredicted RBP28.5■■■□□ 2.15
TRIM8-202ENST00000462202 ZBTB1Q9Y2K1 713 aa28.49■■■□□ 2.15
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms