RNA–Protein interactions for RNA: ENST00000462030.5

HPS3-204, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 2

Gene HPS3, Length 2,486 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-204ENST00000462030 CUL4AQ13619 759 aa22.47■■□□□ 1.19
HPS3-204ENST00000462030 RGPD1P0DJD0 1748 aa22.46■■□□□ 1.19
HPS3-204ENST00000462030 SPATA31D1Q6ZQQ2 1576 aa22.46■■□□□ 1.19
HPS3-204ENST00000462030 CCT4P50991 539 aaKnown RBP22.46■■□□□ 1.19
HPS3-204ENST00000462030 RIMS1Q86UR5 1692 aaKnown RBP22.45■■□□□ 1.18
HPS3-204ENST00000462030 MCM2P49736 904 aa22.45■■□□□ 1.18
HPS3-204ENST00000462030 ANO2Q9NQ90 1003 aa22.45■■□□□ 1.18
HPS3-204ENST00000462030 GNAI2P04899 355 aa22.45■■□□□ 1.18
HPS3-204ENST00000462030 TSPYL4Q9UJ04 414 aa22.45■■□□□ 1.18
HPS3-204ENST00000462030 MX1P20591 662 aa22.44■■□□□ 1.18
HPS3-204ENST00000462030 FOXD4L6Q3SYB3 417 aaPredicted RBP22.44■■□□□ 1.18
HPS3-204ENST00000462030 FOXD4L3Q6VB84 417 aaPredicted RBP22.44■■□□□ 1.18
HPS3-204ENST00000462030 RILPL2Q969X0 211 aa22.44■■□□□ 1.18
HPS3-204ENST00000462030 TTC21BQ7Z4L5 1316 aa22.44■■□□□ 1.18
HPS3-204ENST00000462030 CHMLP26374 656 aa22.43■■□□□ 1.18
HPS3-204ENST00000462030 LRRCC1Q9C099 1032 aa22.43■■□□□ 1.18
HPS3-204ENST00000462030 CCDC39Q9UFE4 941 aa22.43■■□□□ 1.18
HPS3-204ENST00000462030 PNMA6EA0A0J9YXQ4 647 aa22.43■■□□□ 1.18
HPS3-204ENST00000462030 SOX12O15370 315 aa22.43■■□□□ 1.18
HPS3-204ENST00000462030 MCCP23508 829 aa22.43■■□□□ 1.18
HPS3-204ENST00000462030 OVOS2A0A0J9YW53 1432 aa22.43■■□□□ 1.18
HPS3-204ENST00000462030 OVOS2Q6IE36 1432 aa22.43■■□□□ 1.18
HPS3-204ENST00000462030 UQCRHLA0A096LP55 91 aa22.42■■□□□ 1.18
HPS3-204ENST00000462030 TRIM6-TRIM34B2RNG4 842 aa22.42■■□□□ 1.18
HPS3-204ENST00000462030 UQCRHP07919 91 aa22.42■■□□□ 1.18
HPS3-204ENST00000462030 UPF3BQ9BZI7 483 aaKnown RBP22.42■■□□□ 1.18
HPS3-204ENST00000462030 GDPD2Q9HCC8 539 aa22.42■■□□□ 1.18
HPS3-204ENST00000462030 TSPY26PQ9H489 355 aa22.41■■□□□ 1.18
HPS3-204ENST00000462030 FAM13BQ9NYF5 915 aa22.41■■□□□ 1.18
HPS3-204ENST00000462030 MAP3K19Q56UN5 1328 aa22.41■■□□□ 1.18
HPS3-204ENST00000462030 MCM5P33992 734 aa22.41■■□□□ 1.18
HPS3-204ENST00000462030 MTHFSDQ2M296 383 aaKnown RBP22.41■■□□□ 1.18
HPS3-204ENST00000462030 UNC5CLQ8IV45 518 aa22.41■■□□□ 1.18
HPS3-204ENST00000462030 INTS4Q96HW7 963 aaKnown RBP22.41■■□□□ 1.18
HPS3-204ENST00000462030 GADD45BO75293 160 aaPredicted RBP22.4■■□□□ 1.18
HPS3-204ENST00000462030 ANAPC15P60006 121 aa22.4■■□□□ 1.18
HPS3-204ENST00000462030 NUTM2FA1L443 756 aa22.39■■□□□ 1.18
HPS3-204ENST00000462030 IL25Q9H293 177 aa22.39■■□□□ 1.18
HPS3-204ENST00000462030 TECPR2O15040 1411 aa22.39■■□□□ 1.18
HPS3-204ENST00000462030 TCHHQ07283 1943 aa22.39■■□□□ 1.17
HPS3-204ENST00000462030 ACEP12821 1306 aa22.39■■□□□ 1.17
HPS3-204ENST00000462030 MLECQ14165 292 aa22.38■■□□□ 1.17
HPS3-204ENST00000462030 CSPP1Q1MSJ5 1256 aa22.38■■□□□ 1.17
HPS3-204ENST00000462030 CYB5RLQ6IPT4 315 aa22.38■■□□□ 1.17
HPS3-204ENST00000462030 NALCNQ8IZF0 1738 aa22.38■■□□□ 1.17
HPS3-204ENST00000462030 RTF1Q92541 710 aaKnown RBP22.38■■□□□ 1.17
HPS3-204ENST00000462030 SSH2Q76I76 1423 aa22.37■■□□□ 1.17
HPS3-204ENST00000462030 ATP8B2P98198 1209 aa22.37■■□□□ 1.17
HPS3-204ENST00000462030 XRN1Q8IZH2 1706 aaKnown RBP22.37■■□□□ 1.17
HPS3-204ENST00000462030 FLIIQ13045 1269 aa22.36■■□□□ 1.17
HPS3-204ENST00000462030 FKBP5Q13451 457 aaPredicted RBP22.36■■□□□ 1.17
HPS3-204ENST00000462030 NECTIN2Q92692 538 aa22.36■■□□□ 1.17
HPS3-204ENST00000462030 STK31Q9BXU1 1019 aa22.36■■□□□ 1.17
HPS3-204ENST00000462030 SYAP1Q96A49 352 aaPredicted RBP22.36■■□□□ 1.17
HPS3-204ENST00000462030 PTMAP06454 111 aaKnown RBP22.35■■□□□ 1.17
HPS3-204ENST00000462030 USP48Q86UV5 1035 aa22.35■■□□□ 1.17
HPS3-204ENST00000462030 SIRT1Q96EB6 747 aa22.35■■□□□ 1.17
HPS3-204ENST00000462030 STAP2Q9UGK3 403 aa22.35■■□□□ 1.17
HPS3-204ENST00000462030 FAM208AQ9UK61 1670 aaKnown RBP22.35■■□□□ 1.17
HPS3-204ENST00000462030 ARHGEF10O15013 1369 aa22.35■■□□□ 1.17
HPS3-204ENST00000462030 ROBO2Q9HCK4 1378 aa22.35■■□□□ 1.17
HPS3-204ENST00000462030 GNAI3P08754 354 aa22.35■■□□□ 1.17
HPS3-204ENST00000462030 LRRFIP2Q9Y608 721 aaKnown RBP22.35■■□□□ 1.17
HPS3-204ENST00000462030 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP22.35■■□□□ 1.17
HPS3-204ENST00000462030 IL17RAQ96F46 866 aa22.34■■□□□ 1.17
HPS3-204ENST00000462030 FMN2Q9NZ56 1722 aa22.34■■□□□ 1.17
HPS3-204ENST00000462030 USP6P35125 1406 aa22.33■■□□□ 1.17
HPS3-204ENST00000462030 FAM69CQ0P6D2 419 aa22.33■■□□□ 1.17
HPS3-204ENST00000462030 TOPAZ1Q8N9V7 1692 aa22.33■■□□□ 1.17
HPS3-204ENST00000462030 IL1RAPL2Q9NP60 686 aa22.33■■□□□ 1.17
HPS3-204ENST00000462030 USP31Q70CQ4 1352 aa22.33■■□□□ 1.16
HPS3-204ENST00000462030 MPNDQ8N594 471 aa22.33■■□□□ 1.16
HPS3-204ENST00000462030 AGLP35573 1532 aa22.32■■□□□ 1.16
HPS3-204ENST00000462030 RPAP1Q9BWH6 1393 aaPredicted RBP22.32■■□□□ 1.16
HPS3-204ENST00000462030 WDR33Q9C0J8 1336 aaKnown RBP22.32■■□□□ 1.16
HPS3-204ENST00000462030 SASS6Q6UVJ0 657 aa22.32■■□□□ 1.16
HPS3-204ENST00000462030 PPP6R1Q9UPN7 881 aa22.32■■□□□ 1.16
HPS3-204ENST00000462030 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.32■■□□□ 1.16
HPS3-204ENST00000462030 SRCIN1Q9C0H9 1055 aa22.31■■□□□ 1.16
HPS3-204ENST00000462030 CEP170BQ9Y4F5 1589 aaPredicted RBP22.31■■□□□ 1.16
HPS3-204ENST00000462030 ZBTB7CA1YPR0 619 aa22.31■■□□□ 1.16
HPS3-204ENST00000462030 MAP4K4O95819 1239 aaPredicted RBP22.31■■□□□ 1.16
HPS3-204ENST00000462030 HSPA4P34932 840 aa22.31■■□□□ 1.16
HPS3-204ENST00000462030 DYNC1I1O14576 645 aa22.3■■□□□ 1.16
HPS3-204ENST00000462030 PHF14O94880 888 aa22.3■■□□□ 1.16
HPS3-204ENST00000462030 NUTM1Q86Y26 1132 aa22.3■■□□□ 1.16
HPS3-204ENST00000462030 KIAA2012Q0VF49 1180 aa22.3■■□□□ 1.16
HPS3-204ENST00000462030 TPRNQ4KMQ1 711 aa22.3■■□□□ 1.16
HPS3-204ENST00000462030 MAP7D2Q96T17 732 aa22.3■■□□□ 1.16
HPS3-204ENST00000462030 CCDC30Q5VVM6 783 aa22.29■■□□□ 1.16
HPS3-204ENST00000462030 CNPY2Q9Y2B0 182 aa22.29■■□□□ 1.16
HPS3-204ENST00000462030 PLEKHG3A1L390 1219 aa22.28■■□□□ 1.16
HPS3-204ENST00000462030 USP25Q9UHP3 1055 aa22.28■■□□□ 1.16
HPS3-204ENST00000462030 KDRP35968 1356 aa22.28■■□□□ 1.16
HPS3-204ENST00000462030 ZNF830Q96NB3 372 aaPredicted RBP22.28■■□□□ 1.16
HPS3-204ENST00000462030 EYA1Q99502 592 aa22.28■■□□□ 1.16
HPS3-204ENST00000462030 USP44Q9H0E7 712 aa22.28■■□□□ 1.16
HPS3-204ENST00000462030 AOX1Q06278 1338 aa22.27■■□□□ 1.16
HPS3-204ENST00000462030 PLEKHG5O94827 1062 aa22.27■■□□□ 1.16
HPS3-204ENST00000462030 LARP6Q9BRS8 491 aaKnown RBP22.27■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms